Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB07g32892 Brassica carinata HOM05D004519 ORTHO05D006283 3.6e-255 884.4 446 100.0
Sp1g27880 Schrenkiella parvula HOM05D004519 ORTHO05D006283 2.0e-229 798.9 468 88.5
Thhalv10007540m.g Eutrema salsugineum HOM05D004519 ORTHO05D006283 7.9e-226 786.9 469 86.6
BcaC05g27905 Brassica carinata HOM05D004519 ORTHO05D006283 2.1e-223 778.9 454 88.5
BcaB03g13753 Brassica carinata HOM05D004519 ORTHO05D006283 1.1e-222 776.5 457 87.1
A09p34000 Brassica napus HOM05D004519 ORTHO05D006283 3.1e-222 775.0 450 89.3
BolC8t47999H Brassica oleracea HOM05D004519 ORTHO05D006283 2.9e-220 768.5 456 87.3
BcaC07g37628 Brassica carinata HOM05D004519 ORTHO05D006283 3.8e-220 768.1 454 86.8
A08p09320 Brassica napus HOM05D004519 ORTHO05D006283 5.5e-219 764.2 454 86.3
BraA08t32930Z Brassica rapa HOM05D004519 ORTHO05D006283 5.5e-219 764.2 454 86.3
BcaB04g17996 Brassica carinata HOM05D004519 ORTHO05D006283 1.0e-217 760.0 454 85.9
C05p31600 Brassica napus HOM05D004519 ORTHO05D006283 5.1e-217 757.7 395 95.2
BolC5t31883H Brassica oleracea HOM05D004519 ORTHO05D006283 5.1e-217 757.7 395 95.2
AL1G46330 Arabidopsis lyrata HOM05D004519 ORTHO05D006283 1.1e-216 756.5 464 84.3
BcaC05g27251 Brassica carinata HOM05D004519 ORTHO05D006283 4.8e-215 751.1 395 94.4
CARHR031570 Cardamine hirsuta HOM05D004519 ORTHO05D006283 4.0e-214 748.0 468 82.9
Carub.0001s3053 Capsella rubella HOM05D004519 ORTHO05D006283 5.3e-214 747.7 463 83.4
AT1G32200 Arabidopsis thaliana HOM05D004519 ORTHO05D006283 1.2e-213 746.5 464 83.0
BraA05t21393Z Brassica rapa HOM05D004519 ORTHO05D006283 3.4e-213 745.0 451 84.7
A05p25130 Brassica napus HOM05D004519 ORTHO05D006283 3.8e-212 741.5 451 84.5
BraA09t38946Z Brassica rapa HOM05D004519 ORTHO05D006283 4.5e-205 718.0 450 84.2
Aa31LG2G13810 Aethionema arabicum HOM05D004519 ORTHO05D006283 1.9e-203 712.6 475 77.5
C05p39140 Brassica napus HOM05D004519 ORTHO05D006283 6.7e-201 704.1 414 87.4
THA.LOC104812759 Tarenaya hassleriana HOM05D004519 ORTHO05D006283 2.2e-188 662.5 434 76.0
THA.LOC104814413 Tarenaya hassleriana HOM05D004519 ORTHO05D006283 1.9e-187 659.4 454 72.2
Ciclev10001047m.g Citrus clementina HOM05D004519 ORTHO05D006283 1.1e-163 580.5 403 67.2
PSO063G4347 Papaver somniferum HOM05D004519 ORTHO05D006283 7.2e-163 577.8 415 67.2
PGR042G1943 Punica granatum HOM05D004519 ORTHO05D006283 9.5e-163 577.4 439 64.7
Manes.17G018849 Manihot esculenta HOM05D004519 ORTHO05D006283 2.8e-162 575.9 402 67.2
PSO782G3212 Papaver somniferum HOM05D004519 ORTHO05D006283 1.8e-161 573.2 450 64.0
GSVIVG01013060001 Vitis vinifera HOM05D004519 ORTHO05D006283 1.8e-161 573.2 444 64.0
FAN04G1490 Fragaria x ananassa HOM05D004519 ORTHO05D006283 2.0e-160 569.7 447 62.2
RcHm_v2.0_Chr7g0211781 Rosa chinensis HOM05D004519 ORTHO05D006283 4.4e-160 568.5 420 65.5
FvH4_5g23060 Fragaria vesca HOM05D004519 ORTHO05D006283 5.7e-160 568.2 418 64.6
FAN18G3814 Fragaria x ananassa HOM05D004519 ORTHO05D006283 5.7e-160 568.2 418 64.6
MD16G1279400 Malus domestica HOM05D004519 ORTHO05D006283 1.7e-159 566.6 451 61.9
MD06G1026700 Malus domestica HOM05D004519 ORTHO05D006283 3.7e-159 565.5 449 62.4
Cfa012505 Carpinus fangiana HOM05D004519 ORTHO05D006283 1.4e-158 563.5 400 66.5
CsaV3_3G048840 Cucumis sativus L. HOM05D004519 ORTHO05D006283 5.4e-158 561.6 394 68.3
Potri.001G136600 Populus trichocarpa HOM05D004519 ORTHO05D006283 9.2e-158 560.8 401 67.1
CiPaw.11G098500 Carya illinoinensis HOM05D004519 ORTHO05D006283 1.2e-157 560.5 446 62.8
FAN18G1908 Fragaria x ananassa HOM05D004519 ORTHO05D006283 2.0e-157 559.7 434 62.4
CSS0024637 Camellia sinensis var. sinensis HOM05D004519 ORTHO05D006283 2.7e-157 559.3 445 63.1
Nn3g19385 Nelumbo nucifera HOM05D004519 ORTHO05D006283 5.9e-157 558.1 408 65.9
Gorai.007G033500 Gossypium raimondii HOM05D004519 ORTHO05D006283 1.0e-156 557.4 445 64.7
Nn1g00218 Nelumbo nucifera HOM05D004519 ORTHO05D006283 1.0e-156 557.4 402 66.2
Gorai.004G182200 Gossypium raimondii HOM05D004519 ORTHO05D006283 1.3e-156 557.0 451 63.6
Gohir.A11G028600 Gossypium hirsutum HOM05D004519 ORTHO05D006283 2.3e-156 556.2 394 68.8
Dinv25262 Davidia involucrata HOM05D004519 ORTHO05D006283 2.9e-156 555.8 394 67.3
MELO3C003440.2 Cucumis melo HOM05D004519 ORTHO05D006283 5.0e-156 555.1 392 68.4
Dinv29004 Davidia involucrata HOM05D004519 ORTHO05D006283 6.6e-156 554.7 451 61.0
FAN13G3061 Fragaria x ananassa HOM05D004519 ORTHO05D006283 6.6e-156 554.7 401 65.1
Aqoxy3G02176 Aquilegia oxysepala HOM05D004519 ORTHO05D006283 4.3e-155 552.0 445 60.9
Eucgr.E00228 Eucalyptus grandis HOM05D004519 ORTHO05D006283 1.2e-154 550.4 398 65.6
Hma1.2p1_1569F.1_g291200 Hydrangea macrophylla HOM05D004519 ORTHO05D006283 2.8e-154 549.3 447 61.5
Lalb_Chr09g0325481 Lupinus albus HOM05D004519 ORTHO05D006283 2.8e-154 549.3 452 61.5
Gohir.D11G030600 Gossypium hirsutum HOM05D004519 ORTHO05D006283 3.6e-154 548.9 394 68.3
HanXRQChr03g0083251 Helianthus annuus HOM05D004519 ORTHO05D006283 1.0e-153 547.4 442 62.4
TAR629G2035 Trochodendron aralioides HOM05D004519 ORTHO05D006283 1.8e-153 546.6 434 62.7
Sed0022223 Sechium edule HOM05D004519 ORTHO05D006283 2.3e-153 546.2 396 66.9
Sc01g0007150 Simmondsia chinensis HOM05D004519 ORTHO05D006283 2.3e-153 546.2 444 62.2
Lj4g0001331 Lotus japonicus HOM05D004519 ORTHO05D006283 5.2e-153 545.0 427 62.1
CiPaw.12G068400 Carya illinoinensis HOM05D004519 ORTHO05D006283 6.8e-153 544.7 393 66.2
Lsat_1_v5_gn_6_80100 Lactuca sativa HOM05D004519 ORTHO05D006283 6.8e-153 544.7 395 66.3
Gohir.A03G000032 Gossypium hirsutum HOM05D004519 ORTHO05D006283 3.4e-152 542.3 461 60.5
Duzib205G0301 Durio zibethinus HOM05D004519 ORTHO05D006283 4.4e-152 542.0 412 65.0
Lalb_Chr16g0381061 Lupinus albus HOM05D004519 ORTHO05D006283 4.4e-152 542.0 366 68.6
Oeu027094.2 Olea europaea HOM05D004519 ORTHO05D006283 4.4e-152 542.0 399 65.2
Gorai.003G185500 Gossypium raimondii HOM05D004519 ORTHO05D006283 2.2e-151 539.7 461 60.3
Medtr5g029230 Medicago truncatula HOM05D004519 ORTHO05D006283 2.2e-151 539.7 366 69.1
MBI04_g32203_MAGBIO Magnolia biondii HOM05D004519 ORTHO05D006283 4.1e-150 535.4 483 56.1
Sabra01G0105700 Salix brachista HOM05D004519 ORTHO05D006283 7.0e-150 534.6 495 57.0
TPR.G19434 Trifolium pratense HOM05D004519 ORTHO05D006283 2.7e-149 532.7 439 60.6
CAN.G726.25 Capsicum annuum HOM05D004519 ORTHO05D006283 7.8e-149 531.2 452 58.8
Psat2g139000 Pisum sativum HOM05D004519 ORTHO05D006283 1.3e-148 530.4 440 59.8
HanXRQChr13g0414231 Helianthus annuus HOM05D004519 ORTHO05D006283 2.3e-148 529.6 429 61.5
Nitab4.5_0000529g0120 Nicotiana tabacum HOM05D004519 ORTHO05D006283 2.3e-148 529.6 463 57.9
ECA240G3299 Erigeron canadensis HOM05D004519 ORTHO05D006283 3.9e-148 528.9 441 60.1
Glyma.01G014200 Glycine max HOM05D004519 ORTHO05D006283 5.0e-148 528.5 401 63.3
Glyma.09G207900 Glycine max HOM05D004519 ORTHO05D006283 6.6e-148 528.1 388 64.4
Ca_25177_v3 Cicer arietinum L. HOM05D004519 ORTHO05D006283 8.6e-148 527.7 355 69.6
Cc08_g03490 Coffea canephora HOM05D004519 ORTHO05D006283 3.3e-147 525.8 371 67.7
Solyc08g076470.4 Solanum lycopersicum HOM05D004519 ORTHO05D006283 3.3e-147 525.8 437 60.2
Sopen08g025050 Solanum pennellii HOM05D004519 ORTHO05D006283 4.3e-147 525.4 437 60.2
CANSAT01G0127 Cannabis sativa HOM05D004519 ORTHO05D006283 5.6e-147 525.0 367 67.6
Os10g0577900 Oryza sativa ssp. japonica HOM05D004519 ORTHO05D006283 5.6e-147 525.0 371 66.6
ClCG09G011630 Citrullus lanatus HOM05D004519 ORTHO05D006283 2.1e-146 523.1 460 59.1
VMungo1215G0394 Vigna mungo HOM05D004519 ORTHO05D006283 2.8e-146 522.7 390 64.1
Phvul.002G136600 Phaseolus vulgaris HOM05D004519 ORTHO05D006283 2.3e-145 519.6 401 62.6
MSTRG.24848 Avicennia marina HOM05D004519 ORTHO05D006283 4.0e-145 518.8 375 64.3
SGA_v2.0_scaffold198G41070 Striga asiatica HOM05D004519 ORTHO05D006283 5.2e-145 518.5 470 56.2
Migut.E00743 Erythranthe guttata HOM05D004519 ORTHO05D006283 1.5e-144 516.9 449 57.7
ATR0829G164 Amborella trichopoda HOM05D004519 ORTHO05D006283 1.7e-143 513.5 404 61.6
Prupe.5G027200 Prunus persica HOM05D004519 ORTHO05D006283 1.1e-142 510.8 400 61.8
Zm00001eb224960 Zea mays HOM05D004519 ORTHO05D006283 1.2e-141 507.3 452 57.1
Zm00001eb025080 Zea mays HOM05D004519 ORTHO05D006283 6.0e-141 505.0 357 64.7
AUR62018641 Chenopodium quinoa HOM05D004519 ORTHO05D006283 4.3e-139 498.8 352 66.5
Rhsim11G0021900 Rhododendron simsii HOM05D004519 ORTHO05D006283 9.5e-139 497.7 541 49.5
AUR62007353 Chenopodium quinoa HOM05D004519 ORTHO05D006283 1.6e-138 496.9 427 57.8
CSS0001538 Camellia sinensis var. sinensis HOM05D004519 ORTHO05D006283 3.6e-138 495.7 333 69.4
Duzib068G1409 Durio zibethinus HOM05D004519 ORTHO05D006283 2.3e-137 493.0 423 60.0
QL12p001672 Quercus lobata HOM05D004519 ORTHO05D006283 2.6e-136 489.6 531 49.3
CDE12G0245 Ceratophyllum demersum HOM05D004519 ORTHO05D006283 1.4e-134 483.8 430 56.0
DCAR_008221 Daucus carota HOM05D004519 ORTHO05D006283 1.4e-134 483.8 373 64.1
Thecc.03G310400 Theobroma cacao HOM05D004519 ORTHO05D006283 2.4e-134 483.0 460 56.7
Gohir.D03G176300 Gossypium hirsutum HOM05D004519 ORTHO05D006283 5.4e-134 481.9 333 69.1
vmacro00276 Vaccinium macrocarpon HOM05D004519 ORTHO05D006283 3.5e-133 479.2 329 67.8
SEGI_02196 Sequoiadendron giganteum HOM05D004519 ORTHO05D006283 6.0e-133 478.4 452 54.6
arahy.Tifrunner.gnm1.ann1.BI8WMI Arachis hypogaea HOM05D004519 ORTHO05D006283 1.0e-132 477.6 344 64.8
arahy.Tifrunner.gnm1.ann1.D9NVDI Arachis hypogaea HOM05D004519 ORTHO05D006283 1.0e-132 477.6 344 64.8
Lj2A231G41 Lonicera japonica HOM05D004519 ORTHO05D006283 5.1e-132 475.3 462 53.7
unitig_32.g10899 Utricularia gibba HOM05D004519 ORTHO05D006283 2.4e-129 466.5 401 57.4
Gohir.A08G153600 Gossypium hirsutum HOM05D004519 ORTHO05D006283 4.9e-127 458.8 383 61.9
Gohir.D08G174500 Gossypium hirsutum HOM05D004519 ORTHO05D006283 4.9e-127 458.8 383 61.9
Mapoly0045s0098 Marchantia polymorpha HOM05D004519 ORTHO05D006283 1.1e-126 457.6 449 50.1
FAN08G3243 Fragaria x ananassa HOM05D004519 ORTHO05D006283 9.2e-126 454.5 404 57.4
CDE04G2515 Ceratophyllum demersum HOM05D004519 ORTHO05D006283 5.1e-124 448.7 417 54.2
Nitab4.5_0012493g0010 Nicotiana tabacum HOM05D004519 ORTHO05D006283 8.1e-122 441.4 299 68.2
Haze_08164 Corylus avellana HOM05D004519 ORTHO05D006283 1.4e-121 440.7 411 55.2
SMO244G0022 Selaginella moellendorffii HOM05D004519 ORTHO05D006283 1.8e-121 440.3 353 58.4
Peaxi162Scf00170g00818 Petunia axillaris HOM05D004519 ORTHO05D006283 4.4e-120 435.6 413 53.5
EL10Ac5g12013 Beta vulgaris HOM05D004519 ORTHO05D006283 2.9e-119 433.0 386 55.4
HPP92_020895 Vanilla planifolia HOM05D004519 ORTHO05D006283 1.5e-115 420.6 293 66.6
HanXRQChr06g0172791 Helianthus annuus HOM05D004519 ORTHO05D006283 1.3e-114 417.5 361 57.9
Pp3c7_2970 Physcomitrium patens HOM05D004519 ORTHO05D006283 2.4e-113 413.3 402 48.0
AagrBONN_evm.TU.Sc2ySwM_117.1032 Anthoceros agrestis HOM05D004547 ORTHO05D005133 9.0e-113 411.4 405 51.4
EL10Ac5g12011 Beta vulgaris HOM05D004519 ORTHO05D006283 3.5e-109 399.4 386 52.6
CBR_g4494 Chara braunii HOM05D004519 ORTHO05D006283 4.6e-109 399.1 392 50.3
DCAR_004271 Daucus carota HOM05D004519 ORTHO05D006283 6.7e-108 395.2 248 73.4
Actinidia01317 Actinidia chinensis HOM05D004519 ORTHO05D006283 1.3e-103 380.9 322 60.9
Cpa.g.sc208.3 Carica papaya HOM05D004519 ORTHO05D006283 8.7e-100 368.2 217 76.5
Haze_08160 Corylus avellana HOM05D004519 ORTHO05D006283 1.8e-97 360.5 255 68.2
Eucgr.E01634 Eucalyptus grandis HOM05D004519 ORTHO05D006283 2.0e-96 357.1 283 62.5
Atru.chr6.1525 Acer truncatum HOM05D004519 ORTHO05D006283 8.5e-87 325.1 206 71.8
Cre02.g143000 Chlamydomonas reinhardtii HOM05D004519 ORTHO05D006283 5.7e-75 285.8 383 39.4
MCO03G317 Micromonas commoda HOM05D004519 ORTHO05D006283 4.1e-65 253.1 338 40.8
PRCOL_00006772 Prasinoderma coloniale HOM05D004519 ORTHO05D006283 1.6e-64 251.1 318 41.8
Actinidia29340 Actinidia chinensis HOM05D004519 ORTHO05D006283 1.4e-60 238.0 177 65.0
Hma1.2p1_3246F.1_g334370 Hydrangea macrophylla HOM05D004519 ORTHO05D006283 3.6e-45 186.8 176 52.8
Cpa.g.sc208.5 Carica papaya HOM05D004519 ORTHO05D006283 4.3e-38 163.3 205 49.3
MBI15_g25773_MAGBIO Magnolia biondii HOM05D004519 ORTHO05D006283 3.2e-33 147.1 98 67.3
Eucgr.A01818 Eucalyptus grandis HOM05D004519 ORTHO05D006283 3.3e-30 137.1 85 74.1
HanXRQChr16g0500211 Helianthus annuus HOM05D004519 ORTHO05D006283 1.1e-22 112.1 77 70.1
Haze_20066 Corylus avellana HOM05D004519 ORTHO05D007437 9.9e-19 99.0 95 50.5
COL.COLO4_16939 Corchorus olitorius HOM05D004519 ORTHO05D006283 1.3e-18 98.6 73 71.2
Actinidia01316 Actinidia chinensis HOM05D004519 ORTHO05D006283 2.9e-18 97.4 68 63.2
arahy.Tifrunner.gnm1.ann1.LG4SFI Arachis hypogaea HOM05D000755 ORTHO05D017477 4.1e-17 93.6 108 45.4
PGSC0003DMG401014796 Solanum tuberosum HOM05D004519 ORTHO05D006283 1.5e-14 85.1 92 43.5
Gohir.D08G117301 Gossypium hirsutum HOM05D004519 ORTHO05D017048 1.9e-14 84.7 55 67.3
Gohir.D11G228750 Gossypium hirsutum HOM05D004519 ORTHO05D017048 1.9e-14 84.7 55 67.3
Gohir.D11G251850 Gossypium hirsutum HOM05D004519 ORTHO05D017048 1.9e-14 84.7 55 67.3
Gohir.D13G135501 Gossypium hirsutum HOM05D004519 ORTHO05D017048 5.6e-14 83.2 55 65.5
Gorai.008G116000 Gossypium raimondii HOM05D004519 ORTHO05D017048 1.6e-13 81.6 54 66.7
RcHm_v2.0_Chr5g0062811 Rosa chinensis HOM05D004519 ORTHO05D017048 8.1e-13 79.3 54 59.3
Actinidia29341 Actinidia chinensis HOM05D004519 ORTHO05D052920 8.7e-07 59.3 32 75.0
arahy.Tifrunner.gnm1.ann1.18EICQ Arachis hypogaea HOM05D000755 ORTHO05D017477 9.6e-06 55.8 53 52.8


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