Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB07g32875 Brassica carinata HOM05D002988 ORTHO05D003479 1.1e-45 186.4 100 100.0
BcaC05g27239 Brassica carinata HOM05D002988 ORTHO05D003479 4.0e-45 184.5 98 100.0
A09p34060 Brassica napus HOM05D002988 ORTHO05D003479 4.0e-45 184.5 98 100.0
C05p31540 Brassica napus HOM05D002988 ORTHO05D003479 4.0e-45 184.5 98 100.0
BolC5t31878H Brassica oleracea HOM05D002988 ORTHO05D003479 4.0e-45 184.5 98 100.0
BraA09t38952Z Brassica rapa HOM05D002988 ORTHO05D003479 4.0e-45 184.5 98 100.0
Sp1g27800 Schrenkiella parvula HOM05D002988 ORTHO05D003479 1.9e-42 175.6 98 95.9
Thhalv10007423m.g Eutrema salsugineum HOM05D002988 ORTHO05D003479 9.2e-42 173.3 98 93.9
CARHR031490 Cardamine hirsuta HOM05D002988 ORTHO05D003479 1.2e-41 172.9 98 93.9
BcaC05g27241 Brassica carinata HOM05D002988 ORTHO05D003479 4.6e-41 171.0 98 95.9
Carub.0001s3045 Capsella rubella HOM05D002988 ORTHO05D003479 2.1e-38 162.2 98 90.8
AL1G46210 Arabidopsis lyrata HOM05D002988 ORTHO05D003479 4.7e-38 161.0 98 88.8
AT1G32130 Arabidopsis thaliana HOM05D002988 ORTHO05D003479 6.2e-38 160.6 98 88.8
BcaB07g32878 Brassica carinata HOM05D002988 ORTHO05D003479 4.4e-36 154.5 100 87.0
Aa31LG2G13860 Aethionema arabicum HOM05D002988 ORTHO05D003479 9.9e-36 153.3 98 77.6
THA.LOC104798497 Tarenaya hassleriana HOM05D002988 ORTHO05D003479 2.2e-35 152.1 98 84.7
THA.LOC104812762 Tarenaya hassleriana HOM05D002988 ORTHO05D003479 2.2e-35 152.1 98 83.7
Aa31LG9G15550 Aethionema arabicum HOM05D002988 ORTHO05D003479 1.0e-32 143.3 98 77.6
CANSAT21G0553 Cannabis sativa HOM05D002988 ORTHO05D003479 4.4e-28 127.9 100 72.0
Gohir.D03G176600 Gossypium hirsutum HOM05D002988 ORTHO05D003479 4.4e-28 127.9 102 71.6
Gorai.003G185800 Gossypium raimondii HOM05D002988 ORTHO05D003479 4.4e-28 127.9 102 71.6
Ca_25164_v3 Cicer arietinum L. HOM05D002988 ORTHO05D003479 5.8e-28 127.5 98 69.4
Duzib205G0674 Durio zibethinus HOM05D002988 ORTHO05D003479 5.8e-28 127.5 102 71.6
Gohir.A03G000029 Gossypium hirsutum HOM05D002988 ORTHO05D003479 5.8e-28 127.5 103 70.9
Gohir.D12G208000 Gossypium hirsutum HOM05D002988 ORTHO05D003479 1.3e-27 126.3 102 69.6
Gorai.008G223500 Gossypium raimondii HOM05D002988 ORTHO05D003479 1.3e-27 126.3 102 69.6
TWI81G0561 Tripterygium wilfordii HOM05D002988 ORTHO05D003479 2.2e-27 125.6 99 71.7
Gohir.A12G205600 Gossypium hirsutum HOM05D002988 ORTHO05D003479 3.8e-27 124.8 102 68.6
RcHm_v2.0_Chr7g0212171 Rosa chinensis HOM05D002988 ORTHO05D003479 3.8e-27 124.8 100 71.0
Lalb_Chr09g0325421 Lupinus albus HOM05D002988 ORTHO05D003479 4.9e-27 124.4 98 68.4
Potri.003G097700 Populus trichocarpa HOM05D002988 ORTHO05D003479 4.9e-27 124.4 99 71.7
TPR.G19450 Trifolium pratense HOM05D002988 ORTHO05D003479 4.9e-27 124.4 98 68.4
FAN04G0340 Fragaria x ananassa HOM05D002988 ORTHO05D003479 8.4e-27 123.6 100 69.0
FAN08G0201 Fragaria x ananassa HOM05D002988 ORTHO05D003479 8.4e-27 123.6 100 69.0
Prupe.5G026700 Prunus persica HOM05D002988 ORTHO05D003479 8.4e-27 123.6 100 70.0
Sed0002043 Sechium edule HOM05D002988 ORTHO05D003479 8.4e-27 123.6 98 71.4
MELO3C003444.2 Cucumis melo HOM05D002988 ORTHO05D003479 1.1e-26 123.2 98 72.4
CsaV3_3G048800 Cucumis sativus L. HOM05D002988 ORTHO05D003479 1.1e-26 123.2 98 72.4
Sed0019870 Sechium edule HOM05D002988 ORTHO05D003479 1.1e-26 123.2 98 68.4
Cfa012530 Carpinus fangiana HOM05D002988 ORTHO05D003479 1.4e-26 122.9 100 70.0
Cfa012531 Carpinus fangiana HOM05D002988 ORTHO05D003479 1.4e-26 122.9 100 70.0
ClCG09G011590 Citrullus lanatus HOM05D002988 ORTHO05D003479 1.4e-26 122.9 98 71.4
CiPaw.11G099100 Carya illinoinensis HOM05D002988 ORTHO05D003479 1.9e-26 122.5 100 70.0
FvH4_5g23250 Fragaria vesca HOM05D002988 ORTHO05D003479 1.9e-26 122.5 100 69.0
FAN13G1166 Fragaria x ananassa HOM05D002988 ORTHO05D003479 1.9e-26 122.5 100 69.0
FAN18G1509 Fragaria x ananassa HOM05D002988 ORTHO05D003479 1.9e-26 122.5 100 69.0
FAN18G3031 Fragaria x ananassa HOM05D002988 ORTHO05D003479 1.9e-26 122.5 100 69.0
Psat2g139520 Pisum sativum HOM05D002988 ORTHO05D003479 1.9e-26 122.5 98 68.4
TWI60G0749 Tripterygium wilfordii HOM05D002988 ORTHO05D003479 2.4e-26 122.1 99 69.7
Medtr5g028030 Medicago truncatula HOM05D002988 ORTHO05D003479 3.2e-26 121.7 98 67.3
Sabra01G0105100 Salix brachista HOM05D002988 ORTHO05D003479 5.4e-26 120.9 98 67.3
Manes.15G170300 Manihot esculenta HOM05D002988 ORTHO05D003479 1.6e-25 119.4 99 66.7
Potri.001G135900 Populus trichocarpa HOM05D002988 ORTHO05D003479 2.7e-25 118.6 99 67.7
arahy.Tifrunner.gnm1.ann1.79TK8E Arachis hypogaea HOM05D002988 ORTHO05D003479 3.5e-25 118.2 98 66.3
arahy.Tifrunner.gnm1.ann1.VSYF54 Arachis hypogaea HOM05D002988 ORTHO05D003479 3.5e-25 118.2 98 66.3
Eucgr.L02550 Eucalyptus grandis HOM05D002988 ORTHO05D003479 3.5e-25 118.2 102 67.6
Glyma.01G012500 Glycine max HOM05D002988 ORTHO05D003479 3.5e-25 118.2 98 64.3
Glyma.09G209100 Glycine max HOM05D002988 ORTHO05D003479 3.5e-25 118.2 98 64.3
CiPaw.12G069000 Carya illinoinensis HOM05D002988 ORTHO05D003479 4.6e-25 117.9 100 68.0
Lj2C229T12 Lonicera japonica HOM05D002988 ORTHO05D003479 4.6e-25 117.9 98 70.4
Lj2g0001165 Lotus japonicus HOM05D002988 ORTHO05D003479 4.6e-25 117.9 98 65.3
Lj2g0027923 Lotus japonicus HOM05D002988 ORTHO05D003479 4.6e-25 117.9 98 65.3
Nitab4.5_0002429g0010 Nicotiana tabacum HOM05D002988 ORTHO05D003479 4.6e-25 117.9 98 67.3
Zm00001eb335850 Zea mays HOM05D002988 ORTHO05D003479 4.6e-25 117.9 98 66.3
arahy.Tifrunner.gnm1.ann1.4RS22V Arachis hypogaea HOM05D002988 ORTHO05D003479 7.8e-25 117.1 98 65.3
CSS0041130 Camellia sinensis var. sinensis HOM05D002988 ORTHO05D003479 7.8e-25 117.1 98 71.4
SalBow1G6715 Salvia bowleyana HOM05D002988 ORTHO05D003479 7.8e-25 117.1 93 68.8
Nitab4.5_0001632g0050 Nicotiana tabacum HOM05D002988 ORTHO05D003479 1.0e-24 116.7 98 66.3
Solyc06g066320.3 Solanum lycopersicum HOM05D002988 ORTHO05D003479 1.0e-24 116.7 98 66.3
Sopen06g021700 Solanum pennellii HOM05D002988 ORTHO05D003479 1.0e-24 116.7 98 66.3
PGSC0003DMG400016781 Solanum tuberosum HOM05D002988 ORTHO05D003479 1.0e-24 116.7 98 66.3
CAN.G474.23 Capsicum annuum HOM05D002988 ORTHO05D003479 1.7e-24 115.9 98 65.3
GSVIVG01011111001 Vitis vinifera HOM05D002988 ORTHO05D003479 1.7e-24 115.9 99 69.7
Os01g0147200 Oryza sativa ssp. japonica HOM05D002988 ORTHO05D003479 2.3e-24 115.5 98 65.3
MD16G1270500 Malus domestica HOM05D002988 ORTHO05D003479 3.0e-24 115.2 98 68.4
Peaxi162Scf00185g01120 Petunia axillaris HOM05D002988 ORTHO05D003479 3.0e-24 115.2 98 66.3
Phvul.009G172500 Phaseolus vulgaris HOM05D002988 ORTHO05D003479 3.0e-24 115.2 96 67.7
Cc08_g03550 Coffea canephora HOM05D002988 ORTHO05D003479 3.9e-24 114.8 98 65.3
Phvul.002G135200 Phaseolus vulgaris HOM05D002988 ORTHO05D003479 3.9e-24 114.8 96 65.6
Dinv25275 Davidia involucrata HOM05D002988 ORTHO05D003479 5.1e-24 114.4 98 68.4
Lsat_1_v5_gn_3_20800 Lactuca sativa HOM05D002988 ORTHO05D003479 6.6e-24 114.0 98 65.3
PSO063G5812 Papaver somniferum HOM05D002988 ORTHO05D003479 8.7e-24 113.6 98 65.3
PSO339G6723 Papaver somniferum HOM05D002988 ORTHO05D003479 8.7e-24 113.6 98 65.3
MD06G1038400 Malus domestica HOM05D002988 ORTHO05D003479 1.1e-23 113.2 98 68.4
Nn2g11139 Nelumbo nucifera HOM05D002988 ORTHO05D003479 1.1e-23 113.2 98 69.4
vmacro00266 Vaccinium macrocarpon HOM05D002988 ORTHO05D003479 1.5e-23 112.8 98 67.3
VMungo1215G2616 Vigna mungo HOM05D002988 ORTHO05D003479 1.5e-23 112.8 96 63.5
Ah.01g012950 Amaranthus hybridus HOM05D002988 ORTHO05D003479 2.5e-23 112.1 98 66.3
HanXRQChr06g0172711 Helianthus annuus HOM05D002988 ORTHO05D003479 2.5e-23 112.1 98 63.3
Rhsim11G0032300 Rhododendron simsii HOM05D002988 ORTHO05D003479 2.5e-23 112.1 98 67.3
TAR623G1658 Trochodendron aralioides HOM05D002988 ORTHO05D003479 2.5e-23 112.1 98 66.3
Aqoxy2G02232 Aquilegia oxysepala HOM05D002988 ORTHO05D003479 3.3e-23 111.7 98 65.3
ATR0559G075 Amborella trichopoda HOM05D002988 ORTHO05D003479 5.6e-23 110.9 100 62.0
CSS0006732 Camellia sinensis var. sinensis HOM05D002988 ORTHO05D003479 5.6e-23 110.9 98 66.3
Lj8C320T14 Lonicera japonica HOM05D002988 ORTHO05D003479 5.6e-23 110.9 98 66.3
TAR369G1079 Trochodendron aralioides HOM05D002988 ORTHO05D003479 9.6e-23 110.2 98 66.3
Oeu017089.1 Olea europaea HOM05D002988 ORTHO05D003479 1.3e-22 109.8 94 67.0
Hma1.2p1_1645F.1_g295370 Hydrangea macrophylla HOM05D002988 ORTHO05D003479 2.8e-22 108.6 98 63.3
ECA246G1645 Erigeron canadensis HOM05D002988 ORTHO05D003479 3.6e-22 108.2 98 62.2
Thecc.03G311200 Theobroma cacao HOM05D002988 ORTHO05D003479 3.6e-22 108.2 102 65.7
unitig_747.g21364 Utricularia gibba HOM05D002988 ORTHO05D003479 3.6e-22 108.2 98 63.3
CAN.G137.27 Capsicum annuum HOM05D000185 ORTHO05D000105 4.8e-22 107.8 98 64.3
MBI05_g28380_MAGBIO Magnolia biondii HOM05D002988 ORTHO05D003479 4.8e-22 107.8 98 63.3
MSTRG.13895 Avicennia marina HOM05D002988 ORTHO05D003479 6.2e-22 107.5 98 63.3
MSTRG.11903 Avicennia marina HOM05D002988 ORTHO05D003479 8.1e-22 107.1 98 60.2
SGA_v2.0_scaffold96G29042 Striga asiatica HOM05D002988 ORTHO05D003479 1.1e-21 106.7 92 64.1
HPP92_019444 Vanilla planifolia HOM05D002988 ORTHO05D003479 1.8e-21 105.9 98 62.2
SalBow8G3553 Salvia bowleyana HOM05D002988 ORTHO05D003479 3.1e-21 105.1 93 65.6
COL.COLO4_16927 Corchorus olitorius HOM05D002988 ORTHO05D003479 4.0e-21 104.8 102 64.7
CDE08G0151 Ceratophyllum demersum HOM05D002988 ORTHO05D003479 6.9e-21 104.0 96 59.4
AUR62015204 Chenopodium quinoa HOM05D002988 ORTHO05D003479 6.9e-21 104.0 98 62.2
CSS0026853 Camellia sinensis var. sinensis HOM05D002988 ORTHO05D003479 1.5e-20 102.8 78 75.6
CSS0029527 Camellia sinensis var. sinensis HOM05D002988 ORTHO05D003479 1.5e-20 102.8 78 75.6
CSS0020264 Camellia sinensis var. sinensis HOM05D002988 ORTHO05D003479 3.4e-20 101.7 98 64.3
Nn2g13373 Nelumbo nucifera HOM05D002988 ORTHO05D003479 7.6e-20 100.5 98 64.3
SalBow6G4477 Salvia bowleyana HOM05D002988 ORTHO05D003479 4.9e-19 97.8 57 87.7
Eucgr.E00221 Eucalyptus grandis HOM05D002988 ORTHO05D003479 8.4e-19 97.1 100 57.0
PGR042G1591 Punica granatum HOM05D002988 ORTHO05D003479 8.4e-19 97.1 98 61.2
AUR62017667 Chenopodium quinoa HOM05D002988 ORTHO05D003479 1.9e-18 95.9 94 60.6
Cpa.g.sc16.1 Carica papaya HOM05D002988 ORTHO05D003479 4.2e-18 94.7 101 60.4
Lj8C321T9 Lonicera japonica HOM05D002988 ORTHO05D003479 5.4e-18 94.4 85 65.9
Migut.E01320 Erythranthe guttata HOM05D002988 ORTHO05D003479 9.3e-18 93.6 90 60.0
TAR636G2155 Trochodendron aralioides HOM05D002988 ORTHO05D003479 1.6e-17 92.8 95 55.8
DCAR_008208 Daucus carota HOM05D002988 ORTHO05D003479 3.5e-17 91.7 70 68.6
CDE02G4409 Ceratophyllum demersum HOM05D002988 ORTHO05D003479 3.9e-16 88.2 86 55.8
Atru.chr6.1538 Acer truncatum HOM05D002988 ORTHO05D003479 1.1e-15 86.7 103 56.3
SalBow8G3593 Salvia bowleyana HOM05D002988 ORTHO05D003479 1.9e-15 85.9 91 52.7
Ciclev10000803m.g Citrus clementina HOM05D002988 ORTHO05D003479 3.3e-15 85.1 103 56.3
SEGI_12451 Sequoiadendron giganteum HOM05D002988 ORTHO05D003479 7.4e-15 84.0 62 64.5
Mapoly0024s0008 Marchantia polymorpha HOM05D002988 ORTHO05D003479 1.6e-14 82.8 98 51.0
QL12p001089 Quercus lobata HOM05D002988 ORTHO05D003479 2.8e-14 82.0 74 64.9
SEGI_01029 Sequoiadendron giganteum HOM05D002988 ORTHO05D003479 4.8e-14 81.3 63 63.5
Actinidia01328 Actinidia chinensis HOM05D002988 ORTHO05D003479 8.1e-14 80.5 103 51.5
Migut.A00607 Erythranthe guttata HOM05D002988 ORTHO05D003479 1.8e-13 79.3 93 48.4
HanXRQChr17g0537631 Helianthus annuus HOM05D002988 ORTHO05D003479 2.4e-13 79.0 64 70.3
HanXRQChr17g0537641 Helianthus annuus HOM05D002988 ORTHO05D003479 2.4e-13 79.0 64 70.3
arahy.Tifrunner.gnm1.ann1.TE4407 Arachis hypogaea HOM05D002988 ORTHO05D003479 4.0e-13 78.2 74 56.8
Pp3c7_24670 Physcomitrium patens HOM05D002988 ORTHO05D003479 5.3e-13 77.8 91 53.8
Pp3c7_24683 Physcomitrium patens HOM05D002988 ORTHO05D003479 5.3e-13 77.8 91 53.8
arahy.Tifrunner.gnm1.ann1.2HFA03 Arachis hypogaea HOM05D002988 ORTHO05D003479 6.9e-13 77.4 76 59.2
arahy.Tifrunner.gnm1.ann1.A128ZG Arachis hypogaea HOM05D002988 ORTHO05D003479 9.0e-13 77.0 78 55.1
EL10Ac9g22922 Beta vulgaris HOM05D002988 ORTHO05D003479 2.6e-12 75.5 74 55.4
arahy.Tifrunner.gnm1.ann1.JV6Y4C Arachis hypogaea HOM05D002988 ORTHO05D003479 3.4e-12 75.1 76 53.9
SMO304G0131 Selaginella moellendorffii HOM05D002988 ORTHO05D003479 3.4e-12 75.1 69 58.0
arahy.Tifrunner.gnm1.ann1.JK8E19 Arachis hypogaea HOM05D002988 ORTHO05D003479 1.0e-11 73.6 73 56.2
CSS0034248 Camellia sinensis var. sinensis HOM05D002988 ORTHO05D003479 1.2e-09 66.6 100 48.0
SGA_v2.0_scaffold89G27433 Striga asiatica HOM05D002988 ORTHO05D003479 1.6e-09 66.2 73 54.8
SEGI_37231 Sequoiadendron giganteum HOM05D002988 ORTHO05D003479 2.7e-09 65.5 75 50.7
FvH4_7g30270 Fragaria vesca HOM05D002988 ORTHO05D003479 6.0e-09 64.3 87 47.1
FAN06G0099 Fragaria x ananassa HOM05D002988 ORTHO05D003479 6.0e-09 64.3 87 47.1
FAN06G4167 Fragaria x ananassa HOM05D002988 ORTHO05D003479 6.0e-09 64.3 87 47.1
Cpa.g.sc79.45 Carica papaya HOM05D000160 ORTHO05D000496 1.9e-07 59.3 75 54.7
Aqoxy2G03099 Aquilegia oxysepala HOM05D002988 ORTHO05D077724 5.7e-07 57.8 82 46.3
arahy.Tifrunner.gnm1.ann1.H8ZZR2 Arachis hypogaea HOM05D002988 ORTHO05D003479 5.7e-07 57.8 58 55.2
Duzib170G0146 Durio zibethinus HOM05D002988 ORTHO05D003479 5.7e-07 57.8 98 38.8
Thecc.10G149100 Theobroma cacao HOM05D002988 ORTHO05D003479 7.4e-07 57.4 95 35.8


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