Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB07g32608 Brassica carinata HOM05D016015 ORTHO05D024088 4.2e-81 304.7 159 100.0
BcaB05g23037 Brassica carinata HOM05D016015 ORTHO05D024088 3.4e-62 241.9 158 84.8
BcaB05g22647 Brassica carinata HOM05D016015 ORTHO05D024088 2.5e-33 146.0 76 96.1
BcaB03g15113 Brassica carinata HOM05D016015 ORTHO05D090538 4.7e-32 141.7 131 67.9
BcaB03g15057 Brassica carinata HOM05D016015 ORTHO05D024088 1.8e-31 139.8 77 93.5
BcaB06g26130 Brassica carinata HOM05D016015 ORTHO05D091432 2.4e-28 129.4 145 57.9
BcaB03g14106 Brassica carinata HOM05D016015 ORTHO05D024088 1.4e-20 103.6 55 94.5
BcaB04g19206 Brassica carinata HOM05D000675 ORTHO05D003044 9.3e-20 100.9 53 94.3
BcaB01g01891 Brassica carinata HOM05D000141 ORTHO05D001968 7.8e-19 97.8 57 91.2
BcaC04g21383 Brassica carinata HOM05D000141 ORTHO05D001968 2.5e-17 92.8 57 84.2
A09p25540 Brassica napus HOM05D000141 ORTHO05D001968 2.5e-17 92.8 57 84.2
C09p32450 Brassica napus HOM05D000141 ORTHO05D001968 2.5e-17 92.8 57 84.2
BolC9t56090H Brassica oleracea HOM05D000141 ORTHO05D001968 2.5e-17 92.8 57 84.2
BraA09t38129Z Brassica rapa HOM05D000141 ORTHO05D001968 2.5e-17 92.8 57 84.2
CARHR252360 Cardamine hirsuta HOM05D000141 ORTHO05D001968 8.1e-16 87.8 57 82.5
Sp6g03800 Schrenkiella parvula HOM05D000141 ORTHO05D001968 8.1e-16 87.8 57 80.7
AL6G48790 Arabidopsis lyrata HOM05D000141 ORTHO05D001968 1.1e-15 87.4 57 80.7
AL7G32840 Arabidopsis lyrata HOM05D000141 ORTHO05D001968 1.4e-15 87.0 56 78.6
Carub.0006s3314 Capsella rubella HOM05D000141 ORTHO05D001968 1.8e-15 86.7 57 78.9
AT4G21270 Arabidopsis thaliana HOM05D000141 ORTHO05D001968 4.0e-15 85.5 56 75.0
Thhalv10028442m.g Eutrema salsugineum HOM05D000141 ORTHO05D001968 4.0e-15 85.5 57 80.7
CARHR227850 Cardamine hirsuta HOM05D000141 ORTHO05D001968 9.0e-15 84.3 56 76.8
BcaB05g23695 Brassica carinata HOM05D000141 ORTHO05D001968 4.4e-14 82.0 57 75.4
Carub.0007s2016 Capsella rubella HOM05D000141 ORTHO05D001968 2.9e-13 79.3 57 75.4
AT4G05190 Arabidopsis thaliana HOM05D000141 ORTHO05D001968 6.4e-13 78.2 67 64.2
Sp7g19350 Schrenkiella parvula HOM05D000141 ORTHO05D001968 6.4e-13 78.2 56 69.6
Aa31LG9G9250 Aethionema arabicum HOM05D000141 ORTHO05D001968 2.4e-12 76.3 57 70.2
THA.LOC104806262 Tarenaya hassleriana HOM05D000141 ORTHO05D001968 4.6e-11 72.0 57 64.9
THA.LOC104812529 Tarenaya hassleriana HOM05D000141 ORTHO05D001968 6.6e-10 68.2 57 63.2
Cpa.g.sc81.9 Carica papaya HOM05D000141 ORTHO05D001968 3.3e-09 65.9 57 56.1
MD10G1311800 Malus domestica HOM05D000141 ORTHO05D001968 1.1e-07 60.8 58 58.6
Haze_06688 Corylus avellana HOM05D000141 ORTHO05D001968 1.4e-07 60.5 58 56.9
MD05G1336300 Malus domestica HOM05D000141 ORTHO05D001968 9.0e-07 57.8 58 55.2
Cfa016410 Carpinus fangiana HOM05D000141 ORTHO05D001968 1.5e-06 57.0 58 53.4
GSVIVG01007336001 Vitis vinifera HOM05D000141 ORTHO05D001968 3.4e-06 55.8 58 53.4
Ciclev10014313m.g Citrus clementina HOM05D000141 ORTHO05D001968 4.5e-06 55.5 58 51.7
CANSAT56G1430 Cannabis sativa HOM05D000141 ORTHO05D001968 5.8e-06 55.1 59 52.5
Rhsim02G0115000 Rhododendron simsii HOM05D000141 ORTHO05D001968 5.8e-06 55.1 59 52.5


User provided reference genes

Program Settings