Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB07g32549 Brassica carinata HOM05D014571 ORTHO05D023951 0.0e+00 1142.5 642 100.0
BcaC05g26979 Brassica carinata HOM05D014571 ORTHO05D023951 3.7e-91 340.1 511 48.5
BolC5t31559H Brassica oleracea HOM05D014571 ORTHO05D041961 1.8e-90 337.8 657 46.3
C05p28390 Brassica napus HOM05D014571 ORTHO05D041961 8.8e-77 292.4 427 50.4
A09p36810 Brassica napus HOM05D014571 ORTHO05D023951 1.4e-66 258.5 652 40.0
BcaB05g23549 Brassica carinata HOM05D002776 ORTHO05D091522 6.1e-30 136.7 119 68.1
BraA09t39199Z Brassica rapa HOM05D014571 ORTHO05D023951 5.4e-26 123.6 559 34.2
C01p37060 Brassica napus HOM05D000032 ORTHO05D015229 1.4e-21 109.0 286 35.3
Thhalv10009291m.g Eutrema salsugineum HOM05D014571 ORTHO05D031424 2.7e-17 94.7 276 34.8
BcaC01g01348 Brassica carinata HOM05D000032 ORTHO05D015229 1.5e-12 79.0 84 61.9
Sp1g25500 Schrenkiella parvula HOM05D013681 ORTHO05D014939 7.5e-12 76.6 350 28.0
BolC5t30978H Brassica oleracea HOM05D004293 ORTHO05D015229 2.4e-10 71.6 220 31.8
BcaC06g35441 Brassica carinata HOM05D013681 ORTHO05D014939 3.2e-10 71.2 205 29.8
BolC5t31560H Brassica oleracea HOM05D014571 ORTHO05D023951 9.2e-10 69.7 49 77.6
BcaC07g40132 Brassica carinata HOM05D014571 ORTHO05D092915 2.1e-09 68.6 60 65.0
C04p08650 Brassica napus HOM05D004293 ORTHO05D015229 3.5e-09 67.8 57 64.9
AT1G29600 Arabidopsis thaliana HOM05D026265 ORTHO05D031424 1.1e-07 62.8 261 30.3


User provided reference genes

Program Settings