Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB07g32352 Brassica carinata HOM05D001498 ORTHO05D021639 5.0e-67 257.7 134 100.0
BcaB03g15933 Brassica carinata HOM05D001498 ORTHO05D021639 6.3e-62 240.7 127 98.4
BcaB04g18432 Brassica carinata HOM05D001498 ORTHO05D090882 4.0e-56 221.5 118 98.3
BcaB06g25739 Brassica carinata HOM05D001498 ORTHO05D093323 6.8e-56 220.7 118 98.3
BcaB08g35461 Brassica carinata HOM05D001498 ORTHO05D090491 1.4e-53 213.0 118 95.8
BcaB08g35076 Brassica carinata HOM05D001498 ORTHO05D021639 9.1e-53 210.3 113 99.1
BcaB06g26473 Brassica carinata HOM05D001498 ORTHO05D091656 3.5e-44 181.8 98 98.0
C07p49110 Brassica napus HOM05D001498 ORTHO05D097837 5.9e-44 181.0 128 77.3
BolC2t11288H Brassica oleracea HOM05D001498 ORTHO05D011506 7.7e-44 180.6 128 77.3
BcaC08g44373 Brassica carinata HOM05D001498 ORTHO05D011506 1.7e-43 179.5 128 75.8
C09p16580 Brassica napus HOM05D001498 ORTHO05D011506 1.7e-43 179.5 128 75.8
A08p07550 Brassica napus HOM05D001498 ORTHO05D011506 5.0e-43 177.9 128 75.8
C04p21380 Brassica napus HOM05D001498 ORTHO05D013028 5.0e-43 177.9 123 78.0
BolC1t03827H Brassica oleracea HOM05D001498 ORTHO05D011506 5.0e-43 177.9 128 75.8
C06p31050 Brassica napus HOM05D001498 ORTHO05D011506 6.6e-43 177.6 116 81.9
C03p66370 Brassica napus HOM05D001498 ORTHO05D011506 8.6e-43 177.2 117 81.2
BcaC07g38657 Brassica carinata HOM05D001498 ORTHO05D011506 1.1e-42 176.8 128 75.8
C09p17600 Brassica napus HOM05D001498 ORTHO05D011506 3.3e-42 175.3 127 77.2
BcaB06g26755 Brassica carinata HOM05D001498 ORTHO05D092466 5.6e-42 174.5 94 98.9
BcaC02g09114 Brassica carinata HOM05D001498 ORTHO05D011506 5.6e-42 174.5 133 72.9
C08p17880 Brassica napus HOM05D001498 ORTHO05D001885 7.2e-42 174.1 121 77.7
BolC9t54653H Brassica oleracea HOM05D001498 ORTHO05D011506 7.2e-42 174.1 121 77.7
C02p52020 Brassica napus HOM05D001498 ORTHO05D011506 1.2e-41 173.3 124 75.8
C01p38680 Brassica napus HOM05D001498 ORTHO05D011506 3.6e-41 171.8 123 75.6
C01p44920 Brassica napus HOM05D001498 ORTHO05D011506 6.1e-41 171.0 121 76.0
C04p36710 Brassica napus HOM05D001498 ORTHO05D001885 1.0e-40 170.2 122 75.4
BraA03t15290Z Brassica rapa HOM05D001498 ORTHO05D011506 1.0e-40 170.2 119 75.6
BcaC05g27519 Brassica carinata HOM05D001498 ORTHO05D011506 5.2e-40 167.9 133 69.9
C01p30520 Brassica napus HOM05D001498 ORTHO05D001885 8.9e-40 167.2 111 79.3
BolC8t49067H Brassica oleracea HOM05D001498 ORTHO05D011506 1.2e-39 166.8 121 75.2
BolC1t02817H Brassica oleracea HOM05D001498 ORTHO05D106172 2.0e-39 166.0 120 75.8
C09p27470 Brassica napus HOM05D001498 ORTHO05D011506 3.4e-39 165.2 117 76.1
BolC3t19484H Brassica oleracea HOM05D001498 ORTHO05D011506 3.4e-39 165.2 121 74.4
BraA08t32774Z Brassica rapa HOM05D001498 ORTHO05D001885 5.7e-39 164.5 121 74.4
A08p09540 Brassica napus HOM05D001498 ORTHO05D011506 7.5e-39 164.1 120 72.5
BcaC09g48967 Brassica carinata HOM05D001498 ORTHO05D011506 2.9e-38 162.2 116 76.7
C09p21170 Brassica napus HOM05D001498 ORTHO05D011506 2.9e-38 162.2 119 75.6
BolC9t55019H Brassica oleracea HOM05D001498 ORTHO05D011506 2.9e-38 162.2 119 75.6
BcaB03g16423 Brassica carinata HOM05D001498 ORTHO05D091575 6.4e-38 161.0 105 86.7
BolC3t17911H Brassica oleracea HOM05D001498 ORTHO05D008559 8.3e-38 160.6 121 73.6
BolC8t47367H Brassica oleracea HOM05D001498 ORTHO05D011506 8.3e-38 160.6 121 71.9
C03p56230 Brassica napus HOM05D001498 ORTHO05D001885 1.4e-37 159.8 124 71.0
BcaB06g25736 Brassica carinata HOM05D001498 ORTHO05D021639 4.1e-37 158.3 85 98.8
A03p54380 Brassica napus HOM05D001498 ORTHO05D011506 4.1e-37 158.3 124 69.4
A08p06060 Brassica napus HOM05D001498 ORTHO05D011506 5.4e-37 157.9 120 70.8
C02p53500 Brassica napus HOM05D001498 ORTHO05D001885 9.2e-37 157.1 122 71.3
BcaB04g17703 Brassica carinata HOM05D001498 ORTHO05D021639 2.3e-35 152.5 94 89.4
BcaC02g10287 Brassica carinata HOM05D001498 ORTHO05D093229 3.9e-35 151.8 129 66.7
BcaC04g20364 Brassica carinata HOM05D001498 ORTHO05D011506 3.9e-35 151.8 100 81.0
C01p48970 Brassica napus HOM05D001498 ORTHO05D011506 2.5e-34 149.1 113 76.1
BcaB05g23077 Brassica carinata HOM05D001498 ORTHO05D091436 1.2e-33 146.7 125 67.2
BcaB07g33085 Brassica carinata HOM05D001498 ORTHO05D095625 2.1e-33 146.0 130 64.6
BcaB04g17678 Brassica carinata HOM05D001498 ORTHO05D094760 6.2e-33 144.4 130 63.8
BcaB08g35016 Brassica carinata HOM05D001498 ORTHO05D092631 1.4e-32 143.3 125 64.8
BcaB01g03187 Brassica carinata HOM05D001498 ORTHO05D090608 2.3e-32 142.5 128 65.6
BcaB07g33315 Brassica carinata HOM05D001498 ORTHO05D091495 6.8e-32 141.0 111 70.3
BcaC02g09776 Brassica carinata HOM05D001498 ORTHO05D016036 2.6e-31 139.0 100 78.0
BcaC05g25872 Brassica carinata HOM05D001498 ORTHO05D011506 4.4e-31 138.3 128 62.5
C01p30560 Brassica napus HOM05D001498 ORTHO05D011506 1.3e-30 136.7 118 67.8
BcaB06g26483 Brassica carinata HOM05D001498 ORTHO05D095599 1.7e-30 136.3 130 62.3
C03p66000 Brassica napus HOM05D001498 ORTHO05D001885 4.9e-30 134.8 121 64.5
BcaC01g03078 Brassica carinata HOM05D001498 ORTHO05D008559 8.6e-27 124.0 100 70.0
BcaB03g16152 Brassica carinata HOM05D001498 ORTHO05D093112 4.3e-26 121.7 113 63.7
BcaC08g44056 Brassica carinata HOM05D001498 ORTHO05D091470 8.1e-25 117.5 78 79.5
BcaC06g36688 Brassica carinata HOM05D001498 ORTHO05D001885 1.8e-24 116.3 79 78.5
BcaC04g19551 Brassica carinata HOM05D001498 ORTHO05D090991 2.3e-24 115.9 131 60.3
BcaB05g23120 Brassica carinata HOM05D001498 ORTHO05D090647 3.1e-24 115.5 125 56.0
BcaB05g22943 Brassica carinata HOM05D001498 ORTHO05D096110 4.0e-24 115.2 84 73.8
BcaB04g18314 Brassica carinata HOM05D001498 ORTHO05D095953 2.0e-23 112.8 99 68.7
BcaB05g23246 Brassica carinata HOM05D001498 ORTHO05D090900 2.0e-23 112.8 83 73.5
BcaB07g32913 Brassica carinata HOM05D001498 ORTHO05D091922 2.0e-23 112.8 133 55.6
A01p28560 Brassica napus HOM05D001498 ORTHO05D021639 2.9e-22 109.0 71 78.9
BcaB01g01484 Brassica carinata HOM05D001498 ORTHO05D091615 8.3e-22 107.5 133 52.6
BcaB03g16298 Brassica carinata HOM05D001498 ORTHO05D095831 1.9e-21 106.3 130 54.6
BcaB03g16497 Brassica carinata HOM05D001498 ORTHO05D008559 2.4e-21 105.9 89 70.8
BcaC03g14315 Brassica carinata HOM05D001498 ORTHO05D008559 3.2e-21 105.5 69 82.6
BcaB04g17776 Brassica carinata HOM05D001498 ORTHO05D092868 4.1e-21 105.1 122 53.3
BcaB01g01309 Brassica carinata HOM05D001498 ORTHO05D091216 1.2e-20 103.6 74 75.7
BcaB07g32989 Brassica carinata HOM05D001498 ORTHO05D008559 1.6e-20 103.2 130 51.5
BcaB03g16194 Brassica carinata HOM05D001498 ORTHO05D091006 6.0e-20 101.3 93 66.7
BcaC04g22591 Brassica carinata HOM05D001498 ORTHO05D095898 1.7e-19 99.8 66 81.8
BcaC09g50109 Brassica carinata HOM05D001498 ORTHO05D093510 3.0e-19 99.0 103 60.2
BcaB06g27027 Brassica carinata HOM05D001498 ORTHO05D092574 6.6e-19 97.8 90 64.4
BcaB06g26478 Brassica carinata HOM05D001498 ORTHO05D092859 2.5e-18 95.9 95 61.1
BcaB07g33220 Brassica carinata HOM05D001498 ORTHO05D096371 1.4e-16 90.1 93 60.2
BcaB07g33754 Brassica carinata HOM05D001498 ORTHO05D092729 1.8e-16 89.7 68 69.1
BolC5t31266H Brassica oleracea HOM05D001498 ORTHO05D019959 2.3e-16 89.4 127 46.5
BcaC03g13777 Brassica carinata HOM05D001498 ORTHO05D091916 6.8e-16 87.8 88 61.4
BcaB07g33084 Brassica carinata HOM05D001498 ORTHO05D092207 8.4e-14 80.9 87 59.8
BcaC02g11926 Brassica carinata HOM05D001498 ORTHO05D019959 1.1e-13 80.5 109 46.8
BcaB02g11277 Brassica carinata HOM05D001498 ORTHO05D091891 1.9e-13 79.7 105 51.4
BcaB01g01816 Brassica carinata HOM05D001498 ORTHO05D091844 7.1e-13 77.8 102 53.9
BcaB02g11279 Brassica carinata HOM05D001498 ORTHO05D095830 7.1e-13 77.8 106 50.0
BcaB07g33217 Brassica carinata HOM05D001498 ORTHO05D093085 7.1e-13 77.8 85 57.6
BcaB06g26727 Brassica carinata HOM05D001498 ORTHO05D093134 1.2e-12 77.0 106 52.8
BcaB05g23244 Brassica carinata HOM05D001498 ORTHO05D095601 1.6e-12 76.6 84 58.3
BcaB06g27273 Brassica carinata HOM05D001498 ORTHO05D094467 7.8e-12 74.3 102 52.0
BcaC02g11068 Brassica carinata HOM05D001498 ORTHO05D016694 1.0e-11 73.9 107 46.7
C05p25290 Brassica napus HOM05D001498 ORTHO05D019959 1.0e-11 73.9 135 40.7
C09p42290 Brassica napus HOM05D001498 ORTHO05D016694 1.0e-11 73.9 82 51.2
BolC9t57107H Brassica oleracea HOM05D001498 ORTHO05D016694 3.0e-11 72.4 82 50.0
BolC4t23616H Brassica oleracea HOM05D001498 ORTHO05D016694 3.9e-11 72.0 107 45.8
BcaC06g36329 Brassica carinata HOM05D001498 ORTHO05D096194 6.6e-11 71.2 125 40.0
BcaC06g35524 Brassica carinata HOM05D001498 ORTHO05D016694 8.6e-11 70.9 107 43.9
C04p20860 Brassica napus HOM05D001498 ORTHO05D016694 8.6e-11 70.9 107 45.8
BcaC09g51817 Brassica carinata HOM05D001498 ORTHO05D096326 2.5e-10 69.3 42 85.7
BcaB01g01185 Brassica carinata HOM05D001498 ORTHO05D019959 4.3e-10 68.6 107 45.8
BcaC05g27663 Brassica carinata HOM05D001498 ORTHO05D090842 9.6e-10 67.4 107 43.9
BolC7t41038H Brassica oleracea HOM05D001498 ORTHO05D032253 2.8e-09 65.9 85 51.8
BcaB06g27205 Brassica carinata HOM05D001498 ORTHO05D091204 4.7e-09 65.1 107 43.0
C07p06210 Brassica napus HOM05D001498 ORTHO05D032253 8.1e-09 64.3 85 50.6
BcaB05g22880 Brassica carinata HOM05D001498 ORTHO05D019959 1.4e-08 63.5 94 45.7
BcaC06g36230 Brassica carinata HOM05D001498 ORTHO05D032253 1.8e-08 63.2 82 51.2
BcaB02g10765 Brassica carinata HOM05D001498 ORTHO05D095468 2.0e-07 59.7 100 42.0
BcaB07g33213 Brassica carinata HOM05D001498 ORTHO05D090837 2.0e-07 59.7 73 47.9
BcaC04g20544 Brassica carinata HOM05D001498 ORTHO05D016694 2.0e-07 59.7 60 55.0
BcaC05g26789 Brassica carinata HOM05D001498 ORTHO05D094205 2.6e-07 59.3 73 57.5
C07p38510 Brassica napus HOM05D001498 ORTHO05D100413 4.4e-07 58.5 40 70.0
BcaB01g01371 Brassica carinata HOM05D001498 ORTHO05D091381 7.6e-07 57.8 73 46.6
BcaB02g11227 Brassica carinata HOM05D001498 ORTHO05D093168 9.9e-07 57.4 40 77.5
BcaB02g11218 Brassica carinata HOM05D001224 ORTHO05D010571 2.2e-06 56.2 104 44.2
BcaC04g20545 Brassica carinata HOM05D001498 ORTHO05D016694 2.2e-06 56.2 98 42.9


User provided reference genes

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