Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB07g32295 Brassica carinata HOM05D005473 ORTHO05D006543 3.6e-189 664.8 358 100.0
A09p41740 Brassica napus HOM05D005473 ORTHO05D006543 1.1e-172 610.1 359 92.8
BraA09t39663Z Brassica rapa HOM05D005473 ORTHO05D006543 7.6e-171 604.0 358 91.1
C05p22180 Brassica napus HOM05D005473 ORTHO05D006543 5.6e-166 587.8 361 89.5
BolC5t30918H Brassica oleracea HOM05D005473 ORTHO05D006543 4.2e-161 571.6 361 87.8
BcaC05g26209 Brassica carinata HOM05D005473 ORTHO05D006543 7.1e-161 570.9 361 87.8
AL1G36530 Arabidopsis lyrata HOM05D005473 ORTHO05D006543 1.2e-155 553.5 358 80.7
Thhalv10008033m.g Eutrema salsugineum HOM05D005473 ORTHO05D006543 2.6e-155 552.4 360 83.3
CARHR023350 Cardamine hirsuta HOM05D005473 ORTHO05D006543 1.1e-153 547.0 361 82.5
AT1G22970 Arabidopsis thaliana HOM05D005473 ORTHO05D006543 1.4e-153 546.6 360 81.4
Carub.0001s2247 Capsella rubella HOM05D005473 ORTHO05D006543 5.5e-153 544.7 359 79.7
Sp1g20430 Schrenkiella parvula HOM05D005473 ORTHO05D006543 2.8e-149 532.3 359 82.2
Aa31LG7G6980 Aethionema arabicum HOM05D005473 ORTHO05D006543 4.0e-148 528.5 369 75.3
AT1G71150 Arabidopsis thaliana HOM05D005473 ORTHO05D006543 5.1e-127 458.4 356 68.3
AL2G30760 Arabidopsis lyrata HOM05D005473 ORTHO05D006543 9.7e-126 454.1 361 67.9
Sp5g26320 Schrenkiella parvula HOM05D005473 ORTHO05D006543 5.0e-122 441.8 365 65.8
Carub.0002s1804 Capsella rubella HOM05D005473 ORTHO05D006543 8.5e-122 441.0 360 65.6
BraA07t31315Z Brassica rapa HOM05D005473 ORTHO05D006543 2.5e-121 439.5 357 65.3
CARHR064450 Cardamine hirsuta HOM05D005473 ORTHO05D006543 5.5e-121 438.3 357 63.9
THA.LOC104812031 Tarenaya hassleriana HOM05D005473 ORTHO05D006543 2.8e-109 399.4 300 71.3
BcaC08g46554 Brassica carinata HOM05D005473 ORTHO05D006543 1.4e-108 397.1 351 62.1
BcaB03g14874 Brassica carinata HOM05D005473 ORTHO05D006543 2.4e-108 396.4 312 67.0
Cpa.g.sc65.93 Carica papaya HOM05D005473 ORTHO05D006543 5.3e-108 395.2 354 59.6
AT1G22980 Arabidopsis thaliana HOM05D005473 ORTHO05D006543 9.1e-108 394.4 356 61.8
BolC6t39580H Brassica oleracea HOM05D005473 ORTHO05D006543 2.0e-107 393.3 346 61.8
AL1G36540 Arabidopsis lyrata HOM05D005473 ORTHO05D006543 1.0e-106 391.0 342 63.7
Thecc.02G215500 Theobroma cacao HOM05D005473 ORTHO05D006543 1.2e-104 384.0 367 56.7
COL.COLO4_20121 Corchorus olitorius HOM05D005473 ORTHO05D006543 3.0e-103 379.4 368 55.4
Gorai.009G342800 Gossypium raimondii HOM05D005473 ORTHO05D006543 7.5e-102 374.8 365 55.6
Gohir.A05G317600 Gossypium hirsutum HOM05D005473 ORTHO05D006543 8.3e-101 371.3 365 58.1
Gohir.D05G319500 Gossypium hirsutum HOM05D005473 ORTHO05D006543 1.1e-100 370.9 365 55.6
CSS0031478 Camellia sinensis var. sinensis HOM05D005473 ORTHO05D006543 1.4e-100 370.5 360 54.2
A01p19890 Brassica napus HOM05D005473 ORTHO05D006543 1.8e-100 370.2 234 87.2
GSVIVG01011804001 Vitis vinifera HOM05D005473 ORTHO05D006543 1.6e-99 367.1 368 54.6
Prupe.1G320100 Prunus persica HOM05D005473 ORTHO05D006543 2.7e-99 366.3 346 56.9
Dinv04903 Davidia involucrata HOM05D005473 ORTHO05D006543 4.5e-99 365.5 368 53.8
Manes.14G109600 Manihot esculenta HOM05D005473 ORTHO05D006543 1.3e-98 364.0 365 55.1
Potri.008G126400 Populus trichocarpa HOM05D005473 ORTHO05D006543 2.3e-98 363.2 365 54.5
arahy.Tifrunner.gnm1.ann1.45PR62 Arachis hypogaea HOM05D005473 ORTHO05D006543 2.9e-98 362.8 367 53.7
arahy.Tifrunner.gnm1.ann1.GULV0C Arachis hypogaea HOM05D005473 ORTHO05D006543 1.1e-97 360.9 367 53.4
QL01p003042 Quercus lobata HOM05D005473 ORTHO05D006543 1.1e-97 360.9 369 53.1
Sabra08G0095200 Salix brachista HOM05D005473 ORTHO05D006543 7.2e-97 358.2 359 54.6
Atru.chr11.335 Acer truncatum HOM05D005473 ORTHO05D006543 1.6e-96 357.1 370 53.0
Sabra16G0274100 Salix brachista HOM05D005473 ORTHO05D006543 2.1e-96 356.7 359 54.3
Ca_30210_v3 Cicer arietinum L. HOM05D005473 ORTHO05D006543 2.8e-96 356.3 362 52.2
FAN17G2750 Fragaria x ananassa HOM05D005473 ORTHO05D006543 2.8e-96 356.3 355 53.5
Lj5g0028089 Lotus japonicus HOM05D005473 ORTHO05D006543 2.8e-96 356.3 366 52.7
FvH4_4g26380 Fragaria vesca HOM05D005473 ORTHO05D006543 6.1e-96 355.1 343 53.9
FAN22G1873 Fragaria x ananassa HOM05D005473 ORTHO05D006543 6.1e-96 355.1 343 54.2
FAN12G0751 Fragaria x ananassa HOM05D005473 ORTHO05D006543 8.0e-96 354.8 343 53.9
FAN12G1468 Fragaria x ananassa HOM05D005473 ORTHO05D006543 8.0e-96 354.8 343 53.9
RcHm_v2.0_Chr4g0434011 Rosa chinensis HOM05D005473 ORTHO05D006543 8.0e-96 354.8 343 54.5
Hma1.2p1_0114F.1_g055460 Hydrangea macrophylla HOM05D005473 ORTHO05D006543 1.4e-95 354.0 365 53.2
Ciclev10015542m.g Citrus clementina HOM05D005473 ORTHO05D006543 2.3e-95 353.2 364 53.0
Cfa015813 Carpinus fangiana HOM05D000048 ORTHO05D000207 3.0e-95 352.8 368 51.1
SalBow8G1667 Salvia bowleyana HOM05D005473 ORTHO05D006543 3.0e-95 352.8 367 52.6
VMungo0720G0454 Vigna mungo HOM05D005473 ORTHO05D006543 3.0e-95 352.8 363 52.3
FAN07G2597 Fragaria x ananassa HOM05D005473 ORTHO05D006543 4.0e-95 352.4 343 53.9
PGSC0003DMG400030516 Solanum tuberosum HOM05D005473 ORTHO05D006543 1.2e-94 350.9 362 53.6
Medtr1g109070 Medicago truncatula HOM05D005473 ORTHO05D006543 1.5e-94 350.5 357 52.7
CiPaw.05G245400 Carya illinoinensis HOM05D005473 ORTHO05D006543 2.6e-94 349.7 369 51.5
TPR.G4908 Trifolium pratense HOM05D005473 ORTHO05D006543 2.6e-94 349.7 356 53.1
TAR622G1045 Trochodendron aralioides HOM05D005473 ORTHO05D006543 2.6e-94 349.7 365 52.6
A07p37530 Brassica napus HOM05D000048 ORTHO05D006543 1.3e-93 347.4 355 54.4
Glyma.20G123200 Glycine max HOM05D005473 ORTHO05D006543 1.7e-93 347.1 367 52.9
CAN.G1489.13 Capsicum annuum HOM05D005473 ORTHO05D006543 6.3e-93 345.1 365 52.9
Solyc05g008520.3 Solanum lycopersicum HOM05D005473 ORTHO05D006543 6.3e-93 345.1 362 53.0
Psat6g222680 Pisum sativum HOM05D005473 ORTHO05D006543 8.3e-93 344.7 355 52.1
MSTRG.875 Avicennia marina HOM05D005473 ORTHO05D006543 1.4e-92 344.0 368 51.6
Cc11_g09260 Coffea canephora HOM05D005473 ORTHO05D006543 1.4e-92 344.0 364 51.4
Lalb_Chr06g0165731 Lupinus albus HOM05D005473 ORTHO05D006543 1.4e-92 344.0 359 51.5
Sopen05g004360 Solanum pennellii HOM05D005473 ORTHO05D006543 1.4e-92 344.0 362 53.0
Phvul.007G034400 Phaseolus vulgaris HOM05D005473 ORTHO05D006543 1.2e-91 340.9 371 51.8
PGR119G2355 Punica granatum HOM05D005473 ORTHO05D006543 2.7e-91 339.7 348 56.0
vmacro01424 Vaccinium macrocarpon HOM05D005473 ORTHO05D006543 3.5e-91 339.3 372 51.3
Haze_00685 Corylus avellana HOM05D005473 ORTHO05D006543 1.3e-90 337.4 407 46.4
Eucgr.K00649 Eucalyptus grandis HOM05D005473 ORTHO05D006543 2.9e-90 336.3 362 50.3
Atru.chr11.342 Acer truncatum HOM05D005473 ORTHO05D006543 5.0e-90 335.5 345 53.0
Nn4g24024 Nelumbo nucifera HOM05D005473 ORTHO05D006543 1.1e-89 334.3 366 51.4
Lsat_1_v5_gn_3_54040 Lactuca sativa HOM05D005473 ORTHO05D006543 4.3e-89 332.4 365 49.3
ClCG05G022330 Citrullus lanatus HOM05D005473 ORTHO05D006543 1.4e-87 327.4 368 50.8
Sed0015008 Sechium edule HOM05D005473 ORTHO05D006543 1.4e-87 327.4 367 50.4
CANSAT01G2653 Cannabis sativa HOM05D005473 ORTHO05D006543 1.8e-87 327.0 362 52.5
CsaV3_5G034770 Cucumis sativus L. HOM05D005473 ORTHO05D006543 5.2e-87 325.5 368 50.0
Oeu059511.2 Olea europaea HOM05D005473 ORTHO05D006543 9.8e-86 321.2 348 50.9
PSO017G4790 Papaver somniferum HOM05D005473 ORTHO05D006543 1.3e-85 320.9 365 51.0
AUR62002772 Chenopodium quinoa HOM05D005473 ORTHO05D006543 1.7e-85 320.5 352 50.0
ECA246G4292 Erigeron canadensis HOM05D005473 ORTHO05D006543 4.9e-85 318.9 371 47.4
Thhalv10018995m.g Eutrema salsugineum HOM05D005473 ORTHO05D006543 1.1e-84 317.8 272 66.2
AUR62037258 Chenopodium quinoa HOM05D005473 ORTHO05D006543 1.8e-84 317.0 354 49.7
Migut.L01020 Erythranthe guttata HOM05D005473 ORTHO05D006543 1.8e-84 317.0 350 50.3
Peaxi162Scf00205g01024 Petunia axillaris HOM05D000048 ORTHO05D006543 5.4e-84 315.5 334 52.4
Rhsim12G0088500 Rhododendron simsii HOM05D005473 ORTHO05D006543 7.0e-84 315.1 430 43.7
PSO782G5692 Papaver somniferum HOM05D005473 ORTHO05D006543 9.2e-84 314.7 368 51.1
Lj3A877T94 Lonicera japonica HOM05D005473 ORTHO05D006543 1.2e-83 314.3 412 45.1
HanXRQChr15g0477691 Helianthus annuus HOM05D005473 ORTHO05D006543 3.5e-83 312.8 365 47.4
PSO478G0709 Papaver somniferum HOM05D005473 ORTHO05D006543 3.5e-83 312.8 369 50.7
Dinv16166 Davidia involucrata HOM05D005473 ORTHO05D006543 6.0e-83 312.0 358 49.2
Actinidia31990 Actinidia chinensis HOM05D005473 ORTHO05D006543 2.5e-81 306.6 324 52.2
Ca_23703_v3 Cicer arietinum L. HOM05D005473 ORTHO05D006543 1.2e-80 304.3 362 46.1
Ah.03g138500 Amaranthus hybridus HOM05D005473 ORTHO05D006543 6.2e-80 302.0 371 46.4
EL10Ac6g14276 Beta vulgaris HOM05D005473 ORTHO05D006543 1.4e-79 300.8 362 46.1
TWI79G1332 Tripterygium wilfordii HOM05D005473 ORTHO05D006543 4.0e-79 299.3 332 50.3
SGA_v2.0_scaffold50G18546 Striga asiatica HOM05D005473 ORTHO05D006543 5.2e-79 298.9 363 46.8
Sc11g0003970 Simmondsia chinensis HOM05D005473 ORTHO05D006543 1.2e-78 297.7 348 47.7
MBI16_g29822_MAGBIO Magnolia biondii HOM05D005473 ORTHO05D006543 3.4e-78 296.2 374 45.2
Aqoxy5G03875 Aquilegia oxysepala HOM05D005473 ORTHO05D006543 1.4e-76 290.8 361 46.3
Duzib268G1740 Durio zibethinus HOM05D005473 ORTHO05D006543 3.2e-76 289.7 306 53.3
Potri.010G117100 Populus trichocarpa HOM05D005473 ORTHO05D006543 4.6e-75 285.8 298 53.7
Nitab4.5_0013146g0010 Nicotiana tabacum HOM05D005473 ORTHO05D006543 1.3e-74 284.3 307 51.8
CDE07G0910 Ceratophyllum demersum HOM05D005473 ORTHO05D006543 1.2e-72 277.7 356 43.0
unitig_749.g14005 Utricularia gibba HOM05D005473 ORTHO05D006543 2.1e-72 276.9 288 53.5
DCAR_023622 Daucus carota HOM05D005473 ORTHO05D006543 2.8e-72 276.6 306 51.3
HPP92_020137 Vanilla planifolia HOM05D005473 ORTHO05D006543 1.4e-71 274.2 354 44.6
MELO3C012289.2 Cucumis melo HOM05D005473 ORTHO05D006543 3.4e-70 269.6 310 50.3
Os05g0554500 Oryza sativa ssp. japonica HOM05D005473 ORTHO05D006543 4.9e-69 265.8 361 40.4
ATR0691G101 Amborella trichopoda HOM05D005473 ORTHO05D006543 2.7e-67 260.0 369 41.5
Zm00001eb295130 Zea mays HOM05D005473 ORTHO05D006543 3.3e-65 253.1 376 39.6
Thecc.02G215400 Theobroma cacao HOM05D005473 ORTHO05D006543 2.8e-56 223.4 239 51.5
Glyma.10G267900 Glycine max HOM05D005473 ORTHO05D006543 1.3e-53 214.5 246 50.0
SEGI_09717 Sequoiadendron giganteum HOM05D005473 ORTHO05D006543 1.3e-50 204.5 344 36.9
HanXRQChr15g0477701 Helianthus annuus HOM05D005473 ORTHO05D006543 1.9e-49 200.7 351 37.9
SMO202G0044 Selaginella moellendorffii HOM05D005473 ORTHO05D006543 1.3e-48 198.0 329 38.0
Actinidia33629 Actinidia chinensis HOM05D005473 ORTHO05D006543 2.8e-48 196.8 240 49.2
C06p45250 Brassica napus HOM05D005473 ORTHO05D006543 1.1e-47 194.9 184 59.2
Migut.O00950 Erythranthe guttata HOM05D005473 ORTHO05D006543 5.8e-46 189.1 235 47.7
Duzib251G0055 Durio zibethinus HOM05D005473 ORTHO05D006543 2.7e-43 180.3 275 42.2
C06p45240 Brassica napus HOM05D000048 ORTHO05D000207 6.7e-42 175.6 125 70.4
AagrBONN_evm.TU.Sc2ySwM_344.5342 Anthoceros agrestis HOM05D005473 ORTHO05D006543 2.0e-38 164.1 353 30.3
Rhsim03G0134600 Rhododendron simsii HOM05D005473 ORTHO05D006543 9.9e-38 161.8 240 45.0
PSO384G2466 Papaver somniferum HOM05D005473 ORTHO05D006543 8.4e-37 158.7 300 35.0
Pp3c15_5840 Physcomitrium patens HOM05D005473 ORTHO05D006543 8.7e-34 148.7 427 26.2
Hund25017 Selenicereus undatus HOM05D005473 ORTHO05D006543 1.5e-22 111.3 148 41.2
CBR_g3993 Chara braunii HOM05D005493 ORTHO05D007154 1.0e-21 108.6 163 36.8
Oeu036129.1 Olea europaea HOM05D005473 ORTHO05D006543 3.8e-21 106.7 176 39.8
PSO339G4228 Papaver somniferum HOM05D005473 ORTHO05D006543 1.4e-20 104.8 240 31.7
MCO05G366 Micromonas commoda HOM05D005473 ORTHO05D006543 1.4e-12 78.2 284 25.0
PGR142G1573 Punica granatum HOM05D005473 ORTHO05D006543 5.5e-12 76.3 234 27.4
MD16G1034500 Malus domestica HOM05D005473 ORTHO05D006543 2.4e-07 60.8 62 45.2
MSTRG.15906 Avicennia marina HOM05D005473 ORTHO05D006543 3.1e-07 60.5 55 45.5
MD13G1032300 Malus domestica HOM05D005473 ORTHO05D006543 4.1e-07 60.1 56 46.4
CAN.G572.16 Capsicum annuum HOM05D005473 ORTHO05D006543 5.9e-06 56.2 147 27.9


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