Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB07g32264 Brassica carinata HOM05D002386 ORTHO05D095377 2.9e-67 258.5 131 100.0
BcaB07g32964 Brassica carinata HOM05D002386 ORTHO05D092445 1.9e-58 229.2 164 76.2
BcaC02g09467 Brassica carinata HOM05D002386 ORTHO05D032120 6.6e-32 141.0 150 60.0
BcaC09g49616 Brassica carinata HOM05D002386 ORTHO05D039710 3.2e-26 122.1 125 59.2
A01p14640 Brassica napus HOM05D002386 ORTHO05D006475 1.6e-17 93.2 124 51.6
BraA01t01404Z Brassica rapa HOM05D002386 ORTHO05D006475 1.6e-17 93.2 124 51.6
Sp7g21340 Schrenkiella parvula HOM05D002386 ORTHO05D006475 1.6e-17 93.2 132 49.2
AT4G23440 Arabidopsis thaliana HOM05D002386 ORTHO05D006475 2.1e-17 92.8 132 48.5
C01p34480 Brassica napus HOM05D002386 ORTHO05D039710 3.5e-17 92.0 65 75.4
Thhalv10024327m.g Eutrema salsugineum HOM05D002386 ORTHO05D006475 6.0e-17 91.3 132 48.5
C01p18140 Brassica napus HOM05D002386 ORTHO05D006475 1.3e-16 90.1 124 50.0
BolC1t01741H Brassica oleracea HOM05D002386 ORTHO05D006475 1.3e-16 90.1 124 50.0
C04p43120 Brassica napus HOM05D002386 ORTHO05D032120 6.7e-16 87.8 84 64.3
BolC4t25889H Brassica oleracea HOM05D002386 ORTHO05D032120 6.7e-16 87.8 84 64.3
AL7G30020 Arabidopsis lyrata HOM05D002386 ORTHO05D006475 1.1e-15 87.0 132 46.2
Carub.0007s1763 Capsella rubella HOM05D002386 ORTHO05D006475 3.3e-15 85.5 132 43.9
CARHR230770 Cardamine hirsuta HOM05D002386 ORTHO05D006475 7.4e-15 84.3 124 46.0
A02p31530 Brassica napus HOM05D002386 ORTHO05D098323 2.8e-14 82.4 98 57.1
BcaNung01440 Brassica carinata HOM05D002386 ORTHO05D006475 1.4e-13 80.1 69 68.1
A03p54290 Brassica napus HOM05D002386 ORTHO05D006475 1.4e-13 80.1 69 68.1
BraA03t14491Z Brassica rapa HOM05D002386 ORTHO05D006475 1.4e-13 80.1 69 68.1
C07p52670 Brassica napus HOM05D002386 ORTHO05D006475 3.1e-13 79.0 69 66.7
BolC7t45768H Brassica oleracea HOM05D002386 ORTHO05D006475 3.1e-13 79.0 69 66.7
Aa31LG6G6630 Aethionema arabicum HOM05D002386 ORTHO05D006475 1.2e-12 77.0 132 42.4
COL.COLO4_34212 Corchorus olitorius HOM05D002386 ORTHO05D006475 3.3e-07 58.9 100 41.0
Duzib106G2040 Durio zibethinus HOM05D002386 ORTHO05D006475 3.3e-07 58.9 52 63.5
Cfa012209 Carpinus fangiana HOM05D002386 ORTHO05D006475 4.3e-07 58.5 48 66.7
Thecc.10G083600 Theobroma cacao HOM05D002386 ORTHO05D006475 5.7e-07 58.2 52 61.5
THA.LOC104814630 Tarenaya hassleriana HOM05D002386 ORTHO05D006475 9.7e-07 57.4 125 37.6
Duzib114G0014 Durio zibethinus HOM05D002386 ORTHO05D006475 2.2e-06 56.2 49 61.2
Ca_17514_v3 Cicer arietinum L. HOM05D002386 ORTHO05D006475 3.7e-06 55.5 108 38.0
Gohir.D10G210700 Gossypium hirsutum HOM05D002386 ORTHO05D006475 4.8e-06 55.1 52 57.7
Gorai.011G236200 Gossypium raimondii HOM05D002386 ORTHO05D006475 4.8e-06 55.1 52 57.7
Haze_08802 Corylus avellana HOM05D002386 ORTHO05D006475 6.3e-06 54.7 48 62.5
Duzib128G1887 Durio zibethinus HOM05D002386 ORTHO05D006475 6.3e-06 54.7 55 54.5
Gohir.A05G411100 Gossypium hirsutum HOM05D002386 ORTHO05D006475 6.3e-06 54.7 52 59.6


User provided reference genes

Program Settings