Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB07g31901 Brassica carinata HOM05D011140 ORTHO05D013248 9.1e-47 189.9 95 100.0
BcaC05g25785 Brassica carinata HOM05D011140 ORTHO05D013248 2.2e-40 168.7 95 91.6
C05p17250 Brassica napus HOM05D011140 ORTHO05D013248 2.2e-40 168.7 95 91.6
BolC5t30425H Brassica oleracea HOM05D011140 ORTHO05D013248 2.2e-40 168.7 95 91.6
BraA06t24620Z Brassica rapa HOM05D011140 ORTHO05D013248 2.2e-40 168.7 95 91.6
A06p15050 Brassica napus HOM05D011140 ORTHO05D013248 6.3e-40 167.2 95 90.5
BcaB03g14477 Brassica carinata HOM05D011140 ORTHO05D013248 1.8e-31 139.0 99 77.8
A08p30150 Brassica napus HOM05D011140 ORTHO05D013248 9.1e-31 136.7 97 78.4
BraA08t34949Z Brassica rapa HOM05D011140 ORTHO05D013248 9.1e-31 136.7 97 78.4
BcaB03g12952 Brassica carinata HOM05D011140 ORTHO05D013248 2.9e-29 131.7 97 74.2
BcaB07g32207 Brassica carinata HOM05D011140 ORTHO05D013248 3.8e-29 131.3 71 88.7
Thhalv10009347m.g Eutrema salsugineum HOM05D011140 ORTHO05D013248 3.2e-28 128.3 98 74.5
BcaC07g38953 Brassica carinata HOM05D011140 ORTHO05D013248 1.2e-27 126.3 97 72.2
C08p18990 Brassica napus HOM05D011140 ORTHO05D013248 1.2e-27 126.3 97 72.2
BolC8t49523H Brassica oleracea HOM05D011140 ORTHO05D013248 1.2e-27 126.3 97 72.2
Carub.0001s1848 Capsella rubella HOM05D011140 ORTHO05D013248 1.4e-23 112.8 100 68.0
CARHR019480 Cardamine hirsuta HOM05D011140 ORTHO05D013248 1.8e-23 112.5 96 69.8
BcaC07g41288 Brassica carinata HOM05D011140 ORTHO05D013248 1.6e-14 82.8 67 68.7
CiPaw.11G044600 Carya illinoinensis HOM05D007096 ORTHO05D008288 2.4e-07 58.9 102 42.2
Ciclev10023845m.g Citrus clementina HOM05D007096 ORTHO05D008288 5.4e-07 57.8 102 41.2
Cc00_g23090 Coffea canephora HOM05D007096 ORTHO05D008288 1.2e-06 56.6 92 43.5
PGSC0003DMG400023201 Solanum tuberosum HOM05D007096 ORTHO05D008288 1.6e-06 56.2 95 42.1
COL.COLO4_09292 Corchorus olitorius HOM05D007096 ORTHO05D008288 2.7e-06 55.5 97 40.2
Lalb_Chr13g0303241 Lupinus albus HOM05D007096 ORTHO05D008288 3.5e-06 55.1 97 38.1
Atru.chr9.225 Acer truncatum HOM05D007096 ORTHO05D008288 4.5e-06 54.7 108 38.0
Gorai.008G193000 Gossypium raimondii HOM05D007096 ORTHO05D008288 4.5e-06 54.7 104 37.5
Manes.06G092300 Manihot esculenta HOM05D007096 ORTHO05D008288 4.5e-06 54.7 110 37.3
Gohir.D12G179900 Gossypium hirsutum HOM05D007096 ORTHO05D008288 7.8e-06 53.9 104 36.5
Manes.14G078100 Manihot esculenta HOM05D007096 ORTHO05D008288 7.8e-06 53.9 110 35.5
QL10p017020 Quercus lobata HOM05D007096 ORTHO05D008288 7.8e-06 53.9 97 40.2


User provided reference genes

Program Settings