Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB07g31732 Brassica carinata HOM05D001286 ORTHO05D000440 4.5e-51 204.1 92 100.0
C07p05950 Brassica napus HOM05D001286 ORTHO05D024426 7.7e-19 97.1 64 64.1
BolC7t41003H Brassica oleracea HOM05D001286 ORTHO05D024426 7.7e-19 97.1 64 64.1
Carub.0004s2747 Capsella rubella HOM05D001286 ORTHO05D000440 9.8e-14 80.1 63 49.2
BcaC03g14450 Brassica carinata HOM05D001286 ORTHO05D000440 2.2e-13 79.0 61 54.1
BolC2t08007H Brassica oleracea HOM05D001286 ORTHO05D000440 2.2e-13 79.0 61 54.1
AT2G44735 Arabidopsis thaliana HOM05D001286 ORTHO05D000440 6.3e-13 77.4 70 44.3
CARHR139790 Cardamine hirsuta HOM05D001286 ORTHO05D000440 1.1e-12 76.6 62 50.0
AL4G43800 Arabidopsis lyrata HOM05D001286 ORTHO05D000440 1.4e-12 76.3 72 47.2
A02p11260 Brassica napus HOM05D001286 ORTHO05D000440 1.8e-12 75.9 61 52.5
BraA02t06188Z Brassica rapa HOM05D001286 ORTHO05D000440 1.8e-12 75.9 61 52.5
A07p16390 Brassica napus HOM05D001286 ORTHO05D000440 2.4e-12 75.5 72 41.7
BraA07t29366Z Brassica rapa HOM05D001286 ORTHO05D000440 2.4e-12 75.5 72 41.7
BcaB05g22018 Brassica carinata HOM05D001286 ORTHO05D000440 3.1e-12 75.1 61 52.5
Sp3g32590 Schrenkiella parvula HOM05D001286 ORTHO05D000440 3.1e-12 75.1 72 41.7
BcaB03g14398 Brassica carinata HOM05D001286 ORTHO05D000440 5.4e-12 74.3 65 44.6
A07p01550 Brassica napus HOM05D001286 ORTHO05D000440 5.4e-12 74.3 63 46.0
C07p24090 Brassica napus HOM05D001286 ORTHO05D000440 5.4e-12 74.3 65 44.6
BolC7t42933H Brassica oleracea HOM05D001286 ORTHO05D000440 5.4e-12 74.3 65 44.6
BolC2t09692H Brassica oleracea HOM05D001286 ORTHO05D000440 7.0e-12 73.9 61 52.5
BcaB02g08844 Brassica carinata HOM05D001286 ORTHO05D000440 2.7e-11 72.0 61 47.5
BcaB02g08841 Brassica carinata HOM05D001286 ORTHO05D000440 1.3e-10 69.7 66 43.9
C07p03210 Brassica napus HOM05D001286 ORTHO05D000440 1.3e-10 69.7 63 44.4
BolC7t40718H Brassica oleracea HOM05D001286 ORTHO05D000440 1.3e-10 69.7 63 44.4
CARHR094100 Cardamine hirsuta HOM05D001286 ORTHO05D000440 1.7e-10 69.3 69 43.5
AL3G32070 Arabidopsis lyrata HOM05D001286 ORTHO05D000440 1.1e-09 66.6 63 41.3
AT3G18720 Arabidopsis thaliana HOM05D001286 ORTHO05D000440 4.3e-09 64.7 62 37.1
CARHR094110 Cardamine hirsuta HOM05D001286 ORTHO05D000440 4.3e-09 64.7 69 40.6
C04p05620 Brassica napus HOM05D001286 ORTHO05D000440 7.3e-09 63.9 67 43.3
BolC4t22191H Brassica oleracea HOM05D001286 ORTHO05D000440 7.3e-09 63.9 67 43.3
Carub.0003s1850 Capsella rubella HOM05D001286 ORTHO05D000440 7.3e-09 63.9 64 39.1
Sp3g32580 Schrenkiella parvula HOM05D001286 ORTHO05D000440 2.8e-08 62.0 67 38.8
C02p18620 Brassica napus HOM05D001286 ORTHO05D000440 3.6e-08 61.6 52 50.0
BcaB03g16712 Brassica carinata HOM05D001286 ORTHO05D000440 2.3e-07 58.9 60 41.7
BcaB02g08843 Brassica carinata HOM05D001286 ORTHO05D000440 1.5e-06 56.2 51 45.1
AT1G57790 Arabidopsis thaliana HOM05D001286 ORTHO05D000440 9.8e-06 53.5 64 37.5


User provided reference genes

Program Settings