Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB07g31359 Brassica carinata HOM05D007051 ORTHO05D008842 7.3e-122 440.7 237 100.0
C09p19230 Brassica napus HOM05D007051 ORTHO05D008842 1.8e-120 436.0 237 98.7
BcaC04g22447 Brassica carinata HOM05D007051 ORTHO05D008842 4.0e-120 434.9 237 98.3
A09p15970 Brassica napus HOM05D007051 ORTHO05D008842 1.5e-119 433.0 237 97.9
BraA09t37232Z Brassica rapa HOM05D007051 ORTHO05D008842 1.5e-119 433.0 237 97.9
BolC9t54830H Brassica oleracea HOM05D007051 ORTHO05D008842 2.6e-119 432.2 237 98.3
Thhalv10023664m.g Eutrema salsugineum HOM05D007051 ORTHO05D008842 9.3e-117 423.7 237 95.8
Sp2g01860 Schrenkiella parvula HOM05D007051 ORTHO05D008842 1.3e-115 419.9 238 95.4
AL2G13010 Arabidopsis lyrata HOM05D007051 ORTHO05D008842 4.0e-112 408.3 237 91.1
CARHR049060 Cardamine hirsuta HOM05D007051 ORTHO05D008842 1.1e-109 400.2 237 89.0
AT1G62780 Arabidopsis thaliana HOM05D007051 ORTHO05D008842 3.2e-109 398.7 238 88.7
Aa31LG2G320 Aethionema arabicum HOM05D007051 ORTHO05D008842 6.7e-107 391.0 240 87.5
Carub.0002s0220 Capsella rubella HOM05D007051 ORTHO05D008842 1.5e-103 379.8 249 83.5
THA.LOC104809449 Tarenaya hassleriana HOM05D007051 ORTHO05D008842 2.2e-97 359.4 237 80.2
Duzib205G0440 Durio zibethinus HOM05D007051 ORTHO05D008842 1.1e-82 310.5 242 69.8
Prupe.5G077000 Prunus persica HOM05D007051 ORTHO05D008842 2.6e-82 309.3 241 67.6
CiPaw.12G105800 Carya illinoinensis HOM05D007051 ORTHO05D008842 9.7e-82 307.4 242 69.4
Ciclev10021945m.g Citrus clementina HOM05D007051 ORTHO05D008842 2.2e-81 306.2 242 67.8
TAR629G3399 Trochodendron aralioides HOM05D007051 ORTHO05D008842 2.2e-81 306.2 238 70.2
Gohir.A11G020000 Gossypium hirsutum HOM05D007051 ORTHO05D008842 4.1e-80 302.0 243 69.5
Eucgr.D02017 Eucalyptus grandis HOM05D007051 ORTHO05D008842 1.2e-79 300.4 243 65.4
Potri.001G119100 Populus trichocarpa HOM05D007051 ORTHO05D008842 1.2e-79 300.4 240 68.3
Manes.01G074700 Manihot esculenta HOM05D007051 ORTHO05D008842 2.0e-79 299.7 241 68.5
QL12p014185 Quercus lobata HOM05D007051 ORTHO05D008842 2.6e-79 299.3 238 66.0
PGR031G0283 Punica granatum HOM05D007051 ORTHO05D008842 4.5e-79 298.5 241 67.6
Sc01g0009270 Simmondsia chinensis HOM05D007051 ORTHO05D008842 5.9e-79 298.1 240 67.1
Hma1.2p1_1868F.1_g305950 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 1.0e-78 297.4 242 66.1
Atru.chr9.1399 Acer truncatum HOM05D007051 ORTHO05D008842 1.7e-78 296.6 243 65.8
Gorai.007G021000 Gossypium raimondii HOM05D007051 ORTHO05D008842 1.7e-78 296.6 243 68.7
CANSAT21G0170 Cannabis sativa HOM05D007051 ORTHO05D008842 2.2e-78 296.2 243 65.8
Gohir.D11G019700 Gossypium hirsutum HOM05D007051 ORTHO05D008842 2.9e-78 295.8 241 68.5
CSS0029957 Camellia sinensis var. sinensis HOM05D007051 ORTHO05D008842 5.0e-78 295.0 214 71.0
Glyma.11G030400 Glycine max HOM05D007051 ORTHO05D008842 5.0e-78 295.0 243 66.3
SGA_v2.0_scaffold120G32840 Striga asiatica HOM05D007051 ORTHO05D008842 5.0e-78 295.0 235 63.8
MELO3C005568.2 Cucumis melo HOM05D007051 ORTHO05D008842 1.1e-77 293.9 242 66.1
FAN08G0417 Fragaria x ananassa HOM05D007051 ORTHO05D008842 1.9e-77 293.1 241 66.4
FAN18G1307 Fragaria x ananassa HOM05D007051 ORTHO05D008842 1.9e-77 293.1 241 66.4
TWI60G1677 Tripterygium wilfordii HOM05D007051 ORTHO05D008842 1.9e-77 293.1 239 65.7
CSS0034738 Camellia sinensis var. sinensis HOM05D007051 ORTHO05D008842 2.5e-77 292.7 214 70.6
AUR62007459 Chenopodium quinoa HOM05D007051 ORTHO05D008842 2.5e-77 292.7 238 65.1
Dinv21586 Davidia involucrata HOM05D007051 ORTHO05D008842 2.5e-77 292.7 244 66.0
Cc08_g13070 Coffea canephora HOM05D007051 ORTHO05D008842 3.2e-77 292.4 207 70.5
MD04G1081100 Malus domestica HOM05D007051 ORTHO05D008842 4.2e-77 292.0 239 64.0
ClCG01G003730 Citrullus lanatus HOM05D007051 ORTHO05D008842 5.5e-77 291.6 243 65.0
Lj2g0024450 Lotus japonicus HOM05D007051 ORTHO05D008842 5.5e-77 291.6 238 64.3
Lsat_1_v5_gn_3_2541 Lactuca sativa HOM05D007051 ORTHO05D008842 9.4e-77 290.8 243 64.6
CsaV3_5G003870 Cucumis sativus L. HOM05D007051 ORTHO05D008842 2.1e-76 289.7 242 64.9
Ca_06694_v3 Cicer arietinum L. HOM05D007051 ORTHO05D008842 3.6e-76 288.9 241 63.1
Nitab4.5_0010733g0020 Nicotiana tabacum HOM05D007051 ORTHO05D008842 3.6e-76 288.9 238 64.7
VMungo1215G1548 Vigna mungo HOM05D007051 ORTHO05D008842 3.6e-76 288.9 245 64.9
MSTRG.12072 Avicennia marina HOM05D007051 ORTHO05D008842 4.7e-76 288.5 241 63.5
Migut.A00866 Erythranthe guttata HOM05D007051 ORTHO05D008842 1.0e-75 287.3 236 63.1
arahy.Tifrunner.gnm1.ann1.2BY1CI Arachis hypogaea HOM05D007051 ORTHO05D008842 1.4e-75 287.0 207 70.5
FAN04G1713 Fragaria x ananassa HOM05D007051 ORTHO05D008842 1.4e-75 287.0 241 66.0
AUR62039918 Chenopodium quinoa HOM05D007051 ORTHO05D008842 2.3e-75 286.2 238 63.9
Sabra01G0092000 Salix brachista HOM05D007051 ORTHO05D008842 3.0e-75 285.8 240 65.0
GSVIVG01006029001 Vitis vinifera HOM05D007051 ORTHO05D008842 5.2e-75 285.0 238 65.1
Nitab4.5_0004482g0060 Nicotiana tabacum HOM05D007051 ORTHO05D008842 6.7e-75 284.6 238 63.9
Hund11573 Selenicereus undatus HOM05D007051 ORTHO05D008842 6.7e-75 284.6 241 63.1
arahy.Tifrunner.gnm1.ann1.BK8PZK Arachis hypogaea HOM05D007051 ORTHO05D008842 1.1e-74 283.9 207 70.0
FAN13G2377 Fragaria x ananassa HOM05D007051 ORTHO05D008842 1.5e-74 283.5 250 63.6
SalBow6G1069 Salvia bowleyana HOM05D007051 ORTHO05D008842 2.6e-74 282.7 237 61.2
Peaxi162Scf00002g00416 Petunia axillaris HOM05D007051 ORTHO05D008842 7.4e-74 281.2 238 63.4
CDE02G0603 Ceratophyllum demersum HOM05D007051 ORTHO05D008842 9.7e-74 280.8 234 64.5
Medtr5g011990 Medicago truncatula HOM05D007051 ORTHO05D008842 9.7e-74 280.8 252 60.7
Nn6g34078 Nelumbo nucifera HOM05D007051 ORTHO05D008842 9.7e-74 280.8 206 70.9
Phvul.002G060700 Phaseolus vulgaris HOM05D007051 ORTHO05D008842 9.7e-74 280.8 243 63.8
Psat2g179120 Pisum sativum HOM05D007051 ORTHO05D008842 2.8e-73 279.3 243 61.3
unitig_699.g19761 Utricularia gibba HOM05D001703 ORTHO05D007194 2.8e-73 279.3 207 68.1
DCAR_006807 Daucus carota HOM05D007051 ORTHO05D008842 2.4e-72 276.2 242 59.9
Actinidia27438 Actinidia chinensis HOM05D007051 ORTHO05D008842 4.1e-72 275.4 201 71.1
CAN.G1337.17 Capsicum annuum HOM05D007051 ORTHO05D008842 7.0e-72 274.6 237 61.6
Solyc08g079240.4 Solanum lycopersicum HOM05D007051 ORTHO05D008842 1.6e-71 273.5 237 61.6
PGSC0003DMG400004734 Solanum tuberosum HOM05D007051 ORTHO05D008842 2.0e-71 273.1 238 61.3
Sopen08g027680 Solanum pennellii HOM05D007051 ORTHO05D008842 3.5e-71 272.3 237 61.2
ATR0665G189 Amborella trichopoda HOM05D007051 ORTHO05D008842 5.9e-71 271.6 215 64.7
FvH4_5g00440 Fragaria vesca HOM05D007051 ORTHO05D008842 5.9e-71 271.6 204 70.1
Haze_08593 Corylus avellana HOM05D007051 ORTHO05D008842 1.0e-70 270.8 219 68.5
PSO675G3044 Papaver somniferum HOM05D007051 ORTHO05D008842 2.9e-70 269.2 225 61.3
vmacro14055 Vaccinium macrocarpon HOM05D007051 ORTHO05D008842 2.9e-70 269.2 206 66.5
Lalb_Chr09g0324461 Lupinus albus HOM05D007051 ORTHO05D008842 3.8e-70 268.9 236 62.3
PSO717G0094 Papaver somniferum HOM05D007051 ORTHO05D008842 3.8e-70 268.9 225 61.3
Os04g0105700 Oryza sativa ssp. japonica HOM05D007051 ORTHO05D008842 5.0e-70 268.5 247 59.9
Oeu024055.1 Olea europaea HOM05D007051 ORTHO05D008842 8.5e-70 267.7 208 69.2
Zm00001eb300480 Zea mays HOM05D007051 ORTHO05D008842 2.7e-68 262.7 247 58.7
RcHm_v2.0_Chr7g0202061 Rosa chinensis HOM05D007051 ORTHO05D008842 8.0e-68 261.2 240 60.8
Sed0010491 Sechium edule HOM05D007051 ORTHO05D008842 2.2e-65 253.1 220 62.3
Aqoxy7G00687 Aquilegia oxysepala HOM05D007051 ORTHO05D008842 8.3e-65 251.1 238 60.9
ECA246G0398 Erigeron canadensis HOM05D007051 ORTHO05D008842 2.2e-62 243.0 234 58.1
HanXRQChr17g0549011 Helianthus annuus HOM05D007051 ORTHO05D008842 2.2e-62 243.0 243 56.4
MBI04_g32270_MAGBIO Magnolia biondii HOM05D007051 ORTHO05D008842 2.2e-62 243.0 233 57.9
MBI04_g42034_MAGBIO Magnolia biondii HOM05D007051 ORTHO05D008842 8.5e-62 241.1 233 58.4
Thecc.03G259200 Theobroma cacao HOM05D007051 ORTHO05D008842 1.1e-61 240.7 191 71.2
TPR.G820 Trifolium pratense HOM05D007051 ORTHO05D008842 1.7e-54 216.9 246 53.7
Pp3c10_11840 Physcomitrium patens HOM05D007051 ORTHO05D008842 4.7e-52 208.8 207 52.2
HPP92_015062 Vanilla planifolia HOM05D007051 ORTHO05D008842 8.0e-52 208.0 195 55.9
SEGI_34604 Sequoiadendron giganteum HOM05D007051 ORTHO05D008842 1.8e-51 206.8 207 53.1
AagrBONN_evm.TU.Sc2ySwM_362.1892 Anthoceros agrestis HOM05D007051 ORTHO05D008842 5.2e-51 205.3 206 53.4
Hma1.2p1_1868F.1_g305940 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 6.8e-51 204.9 172 64.0
SMO367G0716 Selaginella moellendorffii HOM05D007051 ORTHO05D008842 9.5e-45 184.5 227 45.4
Glyma.01G211400 Glycine max HOM05D007051 ORTHO05D008842 1.2e-39 167.5 169 58.6
Mapoly0062s0102 Marchantia polymorpha HOM05D007051 ORTHO05D008842 6.6e-38 161.8 240 42.9
Duzib084G0812 Durio zibethinus HOM05D007051 ORTHO05D008842 1.1e-35 154.5 154 57.8
EL10Ac5g12994 Beta vulgaris HOM05D007051 ORTHO05D008842 1.7e-33 147.1 114 66.7
Cpa.g.sc29.111 Carica papaya HOM05D007051 ORTHO05D008842 1.1e-32 144.4 118 67.8
Hma1.2p1_2244F.1_g317930 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 1.6e-31 140.6 98 74.5
Cre13.g579550 Chlamydomonas reinhardtii HOM05D007051 ORTHO05D008842 8.9e-27 124.8 229 37.6
vmacro16051 Vaccinium macrocarpon HOM05D007051 ORTHO05D008842 8.1e-20 101.7 79 64.6
PRCOL_00000809 Prasinoderma coloniale HOM05D007051 ORTHO05D008842 1.6e-15 87.4 190 32.1
MCO02G329 Micromonas commoda HOM05D007051 ORTHO05D008842 2.5e-13 80.1 157 30.6
arahy.Tifrunner.gnm1.ann1.VE7KXP Arachis hypogaea HOM05D007051 ORTHO05D008842 3.1e-11 73.2 59 61.0
Oeu056087.1 Olea europaea HOM05D007051 ORTHO05D008842 7.1e-08 62.0 52 63.5
Glyma.05G077300 Glycine max HOM05D007051 ORTHO05D008842 4.6e-07 59.3 54 63.0


User provided reference genes

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