Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB07g31300 Brassica carinata HOM05D007037 ORTHO05D006691 9.0e-30 132.9 65 100.0
A09p16540 Brassica napus HOM05D007037 ORTHO05D006691 1.7e-28 128.6 64 95.3
BraA09t37292Z Brassica rapa HOM05D007037 ORTHO05D006691 1.7e-28 128.6 64 95.3
BcaC04g22368 Brassica carinata HOM05D007037 ORTHO05D006691 7.1e-27 123.2 61 95.1
C09p20100 Brassica napus HOM05D007037 ORTHO05D006691 7.1e-27 123.2 61 95.1
BolC9t54919H Brassica oleracea HOM05D007037 ORTHO05D006691 7.1e-27 123.2 61 95.1
AT1G62045 Arabidopsis thaliana HOM05D007037 ORTHO05D006691 1.8e-22 108.6 69 85.5
CARHR050140 Cardamine hirsuta HOM05D007037 ORTHO05D006691 9.0e-22 106.3 68 79.4
AL2G13860 Arabidopsis lyrata HOM05D007037 ORTHO05D006691 3.2e-19 97.8 69 79.7
Carub.0002s0297 Capsella rubella HOM05D007037 ORTHO05D006691 1.3e-17 92.4 69 73.9
THA.LOC104823525 Tarenaya hassleriana HOM05D007037 ORTHO05D006691 6.9e-14 80.1 75 60.0
Aa31LG1G3030 Aethionema arabicum HOM05D007037 ORTHO05D006691 9.0e-14 79.7 71 62.0
BcaC05g25043 Brassica carinata HOM05D001191 ORTHO05D000979 2.6e-13 78.2 73 61.6
C05p09860 Brassica napus HOM05D007037 ORTHO05D006691 2.6e-13 78.2 73 61.6
CARHR012050 Cardamine hirsuta HOM05D007037 ORTHO05D006691 2.6e-13 78.2 72 63.9
AT1G11740 Arabidopsis thaliana HOM05D001191 ORTHO05D000979 5.9e-13 77.0 72 63.9
Carub.0001s1138 Capsella rubella HOM05D007037 ORTHO05D006691 5.9e-13 77.0 72 65.3
Thhalv10009555m.g Eutrema salsugineum HOM05D001191 ORTHO05D000979 5.9e-13 77.0 71 60.6
AL1G22910 Arabidopsis lyrata HOM05D001191 ORTHO05D000979 1.3e-12 75.9 72 62.5
Sp1g10350 Schrenkiella parvula HOM05D001191 ORTHO05D000979 5.0e-12 73.9 74 58.1
A06p08290 Brassica napus HOM05D007037 ORTHO05D006691 1.4e-11 72.4 73 57.5
Ciclev10018055m.g Citrus clementina HOM05D007037 ORTHO05D006691 3.7e-07 57.8 65 47.7
Phvul.003G079400 Phaseolus vulgaris HOM05D007037 ORTHO05D006691 2.4e-06 55.1 67 49.3
QL05p073032 Quercus lobata HOM05D007037 ORTHO05D006691 2.4e-06 55.1 81 40.7
CSS0006945 Camellia sinensis var. sinensis HOM05D007037 ORTHO05D006691 3.1e-06 54.7 78 43.6
COL.COLO4_00342 Corchorus olitorius HOM05D007037 ORTHO05D006691 5.3e-06 53.9 38 73.7
DCAR_008156 Daucus carota HOM05D007037 ORTHO05D006691 5.3e-06 53.9 84 42.9
Lalb_Chr13g0304241 Lupinus albus HOM05D007037 ORTHO05D006691 5.3e-06 53.9 68 47.1
Peaxi162Scf01204g00120 Petunia axillaris HOM05D007037 ORTHO05D006691 5.3e-06 53.9 69 40.6
Psat4g006560 Pisum sativum HOM05D007037 ORTHO05D006691 5.3e-06 53.9 64 48.4
Lj4g0019440 Lotus japonicus HOM05D007037 ORTHO05D006691 6.9e-06 53.5 67 46.3
FAN25G2740 Fragaria x ananassa HOM05D007037 ORTHO05D006691 9.0e-06 53.1 81 38.3
RcHm_v2.0_Chr5g0002881 Rosa chinensis HOM05D007037 ORTHO05D006691 9.0e-06 53.1 77 40.3
Sopen02g011150 Solanum pennellii HOM05D007037 ORTHO05D006691 9.0e-06 53.1 55 54.5


User provided reference genes

Program Settings