Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB07g31203 Brassica carinata HOM05D000007 ORTHO05D000017 1.8e-66 255.8 124 100.0
Sp3g05160 Schrenkiella parvula HOM05D000007 ORTHO05D000017 2.6e-33 145.6 129 61.2
Thhalv10020779m.g Eutrema salsugineum HOM05D000007 ORTHO05D000017 2.6e-30 135.6 125 59.2
AT3G06240 Arabidopsis thaliana HOM05D000007 ORTHO05D000017 1.0e-29 133.7 129 55.0
Carub.0003s0567 Capsella rubella HOM05D000007 ORTHO05D000017 1.0e-29 133.7 125 57.6
AL3G17100 Arabidopsis lyrata HOM05D000007 ORTHO05D000017 1.3e-29 133.3 125 56.8
BcaB03g14658 Brassica carinata HOM05D000007 ORTHO05D000017 2.2e-29 132.5 129 55.8
CARHR080760 Cardamine hirsuta HOM05D000007 ORTHO05D000017 1.1e-28 130.2 127 54.3
C03p42040 Brassica napus HOM05D000007 ORTHO05D000017 2.7e-27 125.6 129 54.3
BolC3t16484H Brassica oleracea HOM05D000007 ORTHO05D000017 8.0e-27 124.0 125 53.6
AL3G17110 Arabidopsis lyrata HOM05D000007 ORTHO05D000017 1.8e-26 122.9 125 54.4
A03p34560 Brassica napus HOM05D000007 ORTHO05D000017 1.8e-26 122.9 129 49.6
BraA03t12634Z Brassica rapa HOM05D000007 ORTHO05D000017 3.0e-26 122.1 129 52.7
Aa31LG5G16750 Aethionema arabicum HOM05D000007 ORTHO05D000017 5.2e-26 121.3 124 52.4
A03p34570 Brassica napus HOM05D000007 ORTHO05D000017 6.7e-26 120.9 125 52.8
BcaC01g04329 Brassica carinata HOM05D000007 ORTHO05D000017 2.8e-24 115.5 123 52.8
THA.LOC104799786 Tarenaya hassleriana HOM05D000007 ORTHO05D000017 2.8e-24 115.5 125 50.4
AL7G42560 Arabidopsis lyrata HOM05D000007 ORTHO05D000017 2.7e-22 109.0 129 49.6
BcaB08g35849 Brassica carinata HOM05D000007 ORTHO05D000017 2.5e-20 102.4 113 53.1
C03p24040 Brassica napus HOM05D000007 ORTHO05D000017 2.5e-20 102.4 130 48.5
BcaB01g03790 Brassica carinata HOM05D000007 ORTHO05D000017 5.5e-20 101.3 125 49.6
THA.LOC104820108 Tarenaya hassleriana HOM05D000007 ORTHO05D000017 3.6e-19 98.6 125 44.8
BcaB03g14663 Brassica carinata HOM05D000007 ORTHO05D000017 8.0e-19 97.4 91 54.9
THA.LOC104818785 Tarenaya hassleriana HOM05D000007 ORTHO05D000017 8.0e-19 97.4 125 44.8
THA.LOC104818816 Tarenaya hassleriana HOM05D000007 ORTHO05D000017 1.0e-18 97.1 119 43.7
THA.LOC104818824 Tarenaya hassleriana HOM05D000007 ORTHO05D000017 2.3e-18 95.9 129 42.6
THA.LOC104818784 Tarenaya hassleriana HOM05D000007 ORTHO05D000017 4.0e-18 95.1 125 42.4
THA.LOC104818815 Tarenaya hassleriana HOM05D000007 ORTHO05D000017 1.2e-17 93.6 125 44.0
THA.LOC104818822 Tarenaya hassleriana HOM05D000007 ORTHO05D000017 2.6e-17 92.4 128 44.5
THA.LOC104818818 Tarenaya hassleriana HOM05D000007 ORTHO05D000017 3.4e-17 92.0 124 41.1
THA.LOC104818813 Tarenaya hassleriana HOM05D000007 ORTHO05D000017 2.2e-16 89.4 101 50.5
THA.LOC104818825 Tarenaya hassleriana HOM05D000007 ORTHO05D000017 3.7e-16 88.6 121 44.6
BcaC01g05632 Brassica carinata HOM05D000007 ORTHO05D000017 1.4e-15 86.7 75 60.0
Cpa.g.sc16.53 Carica papaya HOM05D000007 ORTHO05D000017 1.3e-13 80.1 108 39.8
COL.COLO4_13989 Corchorus olitorius HOM05D000007 ORTHO05D000017 1.7e-13 79.7 124 37.9
Gohir.A09G060100 Gossypium hirsutum HOM05D000007 ORTHO05D000017 1.1e-12 77.0 108 39.8
Gohir.D09G059300 Gossypium hirsutum HOM05D000007 ORTHO05D000017 2.5e-12 75.9 108 38.9
Gorai.006G073900 Gossypium raimondii HOM05D000007 ORTHO05D000017 2.5e-12 75.9 108 38.9
Thecc.04G270500 Theobroma cacao HOM05D000007 ORTHO05D000017 3.2e-12 75.5 108 39.8
FAN11G0170 Fragaria x ananassa HOM05D000007 ORTHO05D005026 1.0e-10 70.5 106 39.6
FAN16G2291 Fragaria x ananassa HOM05D000007 ORTHO05D005026 1.0e-10 70.5 106 39.6
Duzib151G0963 Durio zibethinus HOM05D000007 ORTHO05D000017 1.4e-10 70.1 108 36.1
BolC3t14794H Brassica oleracea HOM05D000007 ORTHO05D000017 2.3e-10 69.3 64 57.8
FvH4_3g39980 Fragaria vesca HOM05D000007 ORTHO05D005026 2.3e-10 69.3 106 38.7
THA.LOC104818817 Tarenaya hassleriana HOM05D000007 ORTHO05D000017 8.8e-10 67.4 74 45.9
Prupe.4G237500 Prunus persica HOM05D000007 ORTHO05D005026 1.5e-09 66.6 123 35.0
FAN25G3524 Fragaria x ananassa HOM05D000007 ORTHO05D005026 2.0e-09 66.2 106 38.7
QL08p001470 Quercus lobata HOM05D000007 ORTHO05D000017 3.4e-09 65.5 124 34.7
Lsat_1_v5_gn_4_143700 Lactuca sativa HOM05D000007 ORTHO05D000017 5.7e-09 64.7 113 38.1
PGSC0003DMG400006277 Solanum tuberosum HOM05D000007 ORTHO05D000017 9.8e-09 63.9 123 30.9
QL08p017442 Quercus lobata HOM05D000007 ORTHO05D000017 2.2e-08 62.8 111 34.2
Gohir.D10G159700 Gossypium hirsutum HOM05D000007 ORTHO05D000017 2.8e-08 62.4 114 35.1
Gorai.011G179400 Gossypium raimondii HOM05D000007 ORTHO05D000017 2.8e-08 62.4 114 35.1
PSO478G2532 Papaver somniferum HOM05D000007 ORTHO05D000017 3.7e-08 62.0 119 37.8
PSO782G3931 Papaver somniferum HOM05D000007 ORTHO05D000017 6.3e-08 61.2 120 35.0
PSO675G3468 Papaver somniferum HOM05D000007 ORTHO05D000017 8.3e-08 60.8 130 32.3
A03p20440 Brassica napus HOM05D000007 ORTHO05D000017 1.1e-07 60.5 48 60.4
BraA03t11287Z Brassica rapa HOM05D000007 ORTHO05D000017 1.1e-07 60.5 48 60.4
Nitab4.5_0000059g0520 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.1e-07 60.5 113 34.5
Sabra06G0009400 Salix brachista HOM05D000007 ORTHO05D000017 2.4e-07 59.3 120 33.3
Potri.006G013000 Populus trichocarpa HOM05D000007 ORTHO05D000017 3.1e-07 58.9 124 34.7
FAN11G3477 Fragaria x ananassa HOM05D000007 ORTHO05D005026 7.0e-07 57.8 129 34.1
MD11G1203000 Malus domestica HOM05D000007 ORTHO05D005026 7.0e-07 57.8 104 32.7
PSO384G0684 Papaver somniferum HOM05D000007 ORTHO05D000017 7.0e-07 57.8 130 32.3
RcHm_v2.0_Chr5g0026601 Rosa chinensis HOM05D000007 ORTHO05D000017 7.0e-07 57.8 106 31.1
FvH4_3g39990 Fragaria vesca HOM05D000007 ORTHO05D005026 9.2e-07 57.4 129 34.1
PGSC0003DMG400006293 Solanum tuberosum HOM05D000007 ORTHO05D000017 9.2e-07 57.4 99 32.3
Nitab4.5_0003546g0050 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.2e-06 57.0 110 34.5
PSO384G4726 Papaver somniferum HOM05D000007 ORTHO05D000017 1.2e-06 57.0 111 36.0
RcHm_v2.0_Chr5g0072031 Rosa chinensis HOM05D000007 ORTHO05D005026 1.2e-06 57.0 116 34.5
FAN16G0738 Fragaria x ananassa HOM05D000007 ORTHO05D000017 1.6e-06 56.6 107 34.6
MD10G1202200 Malus domestica HOM05D000007 ORTHO05D000017 1.6e-06 56.6 120 34.2
PSO675G2314 Papaver somniferum HOM05D000007 ORTHO05D000017 1.6e-06 56.6 128 31.2
RcHm_v2.0_Chr5g0072021 Rosa chinensis HOM05D000007 ORTHO05D005026 1.6e-06 56.6 123 31.7
FAN01G3069 Fragaria x ananassa HOM05D000417 ORTHO05D011116 2.0e-06 56.2 107 34.6
FAN09G0878 Fragaria x ananassa HOM05D000417 ORTHO05D011116 2.0e-06 56.2 107 34.6
FvH4_3g15810 Fragaria vesca HOM05D000007 ORTHO05D000017 2.7e-06 55.8 106 32.1
FAN11G2222 Fragaria x ananassa HOM05D000007 ORTHO05D000017 3.5e-06 55.5 106 32.1
FAN16G3279 Fragaria x ananassa HOM05D000007 ORTHO05D005026 3.5e-06 55.5 129 33.3
Peaxi162Scf00047g00814 Petunia axillaris HOM05D000007 ORTHO05D000017 3.5e-06 55.5 117 28.2
Cfa004551 Carpinus fangiana HOM05D000007 ORTHO05D000039 4.5e-06 55.1 114 35.1
Dinv38186 Davidia involucrata HOM05D000007 ORTHO05D000017 5.9e-06 54.7 131 29.8
Duzib268G0143 Durio zibethinus HOM05D000007 ORTHO05D000017 5.9e-06 54.7 132 31.8
PSO782G1853 Papaver somniferum HOM05D000007 ORTHO05D000017 5.9e-06 54.7 118 33.9
CSS0004500 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000017 7.7e-06 54.3 106 32.1
Duzib268G0983 Durio zibethinus HOM05D000007 ORTHO05D000017 7.7e-06 54.3 134 30.6
PSO339G2306 Papaver somniferum HOM05D000007 ORTHO05D000017 7.7e-06 54.3 107 36.4


User provided reference genes

Program Settings