Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB07g30899 Brassica carinata HOM05D006619 ORTHO05D008351 3.2e-174 615.1 353 100.0
C09p27640 Brassica napus HOM05D006619 ORTHO05D008351 4.1e-153 545.0 353 90.9
BcaC04g21786 Brassica carinata HOM05D006619 ORTHO05D008351 7.0e-153 544.3 353 90.9
BolC9t55627H Brassica oleracea HOM05D006619 ORTHO05D008351 7.0e-153 544.3 353 90.9
BraA09t37763Z Brassica rapa HOM05D006619 ORTHO05D008351 7.3e-150 534.3 353 89.2
A09p21640 Brassica napus HOM05D006619 ORTHO05D008351 2.3e-148 529.3 353 88.7
Sp2g10250 Schrenkiella parvula HOM05D006619 ORTHO05D008351 9.2e-145 517.3 355 83.9
Thhalv10001132m.g Eutrema salsugineum HOM05D006619 ORTHO05D008351 6.6e-143 511.1 352 84.4
AT5G45310 Arabidopsis thaliana HOM05D006619 ORTHO05D008351 5.8e-139 498.0 350 82.3
CARHR176830 Cardamine hirsuta HOM05D006619 ORTHO05D008351 1.1e-134 483.8 352 79.8
AL8G13490 Arabidopsis lyrata HOM05D006619 ORTHO05D008351 5.8e-131 471.5 353 79.6
Carub.0008s0284 Capsella rubella HOM05D006619 ORTHO05D008351 2.5e-102 376.3 352 68.2
Aa31LG9G7710 Aethionema arabicum HOM05D006619 ORTHO05D008351 8.7e-95 351.3 352 64.8
THA.LOC104811203 Tarenaya hassleriana HOM05D006619 ORTHO05D008351 2.3e-87 326.6 367 51.0
TAR629G0027 Trochodendron aralioides HOM05D006619 ORTHO05D008351 1.7e-45 187.6 374 34.5
Dinv37439 Davidia involucrata HOM05D006619 ORTHO05D008351 9.2e-44 181.8 336 39.3
FAN18G2839 Fragaria x ananassa HOM05D006619 ORTHO05D008351 2.9e-42 176.8 364 34.6
Duzib084G0833 Durio zibethinus HOM05D006619 ORTHO05D008351 5.0e-42 176.0 350 35.7
Thecc.03G321400 Theobroma cacao HOM05D006619 ORTHO05D008351 5.0e-42 176.0 353 36.3
GSVIVG01036901001 Vitis vinifera HOM05D006619 ORTHO05D008351 6.6e-42 175.6 325 37.2
RcHm_v2.0_Chr7g0215151 Rosa chinensis HOM05D006619 ORTHO05D008351 1.5e-41 174.5 347 35.2
Prupe.5G014600 Prunus persica HOM05D006619 ORTHO05D008351 1.9e-41 174.1 368 33.2
FvH4_5g24810 Fragaria vesca HOM05D006619 ORTHO05D008351 2.5e-41 173.7 360 34.2
FAN08G1468 Fragaria x ananassa HOM05D006619 ORTHO05D008351 4.3e-41 172.9 349 34.4
TWI60G1390 Tripterygium wilfordii HOM05D006619 ORTHO05D008351 7.3e-41 172.2 350 36.0
FAN04G1190 Fragaria x ananassa HOM05D006619 ORTHO05D008351 2.8e-40 170.2 364 33.5
Medtr5g025800 Medicago truncatula HOM05D006619 ORTHO05D008351 2.8e-40 170.2 352 36.9
Psat0s808g0080 Pisum sativum HOM05D006619 ORTHO05D008351 3.6e-40 169.9 347 37.2
Lsat_1_v5_gn_3_19920 Lactuca sativa HOM05D006619 ORTHO05D008351 4.7e-40 169.5 290 39.0
Eucgr.D02571 Eucalyptus grandis HOM05D006619 ORTHO05D008351 6.1e-40 169.1 346 41.3
HanXRQChr06g0173221 Helianthus annuus HOM05D006619 ORTHO05D008351 3.0e-39 166.8 315 38.7
MD06G1011900 Malus domestica HOM05D006619 ORTHO05D008351 3.0e-39 166.8 343 34.1
Atru.chr6.2146 Acer truncatum HOM05D006619 ORTHO05D008351 4.0e-39 166.4 348 40.5
TPR.G7876 Trifolium pratense HOM05D006619 ORTHO05D008351 1.5e-38 164.5 349 35.5
Duzib205G1329 Durio zibethinus HOM05D006619 ORTHO05D008351 3.4e-38 163.3 344 35.5
Lj2g0025157 Lotus japonicus HOM05D006619 ORTHO05D008351 3.4e-38 163.3 341 36.4
Cfa012616 Carpinus fangiana HOM05D006619 ORTHO05D008351 4.4e-38 162.9 351 36.2
Ciclev10001580m.g Citrus clementina HOM05D006619 ORTHO05D008351 4.4e-38 162.9 358 33.8
Glyma.09G217700 Glycine max HOM05D006619 ORTHO05D008351 4.4e-38 162.9 334 35.0
PGR031G2471 Punica granatum HOM05D006619 ORTHO05D008351 4.4e-38 162.9 322 36.6
PSO170G1900 Papaver somniferum HOM05D006619 ORTHO05D008351 7.5e-38 162.2 341 35.2
CiPaw.11G070000 Carya illinoinensis HOM05D006619 ORTHO05D008351 9.8e-38 161.8 351 34.8
Gohir.D08G169400 Gossypium hirsutum HOM05D006619 ORTHO05D008351 9.8e-38 161.8 314 35.7
Gorai.004G176600 Gossypium raimondii HOM05D006619 ORTHO05D008351 1.3e-37 161.4 314 35.7
Glyma.01G152500 Glycine max HOM05D006619 ORTHO05D008351 1.7e-37 161.0 360 34.2
Lalb_Chr05g0215221 Lupinus albus HOM05D006619 ORTHO05D008351 2.2e-37 160.6 350 34.0
FAN13G0980 Fragaria x ananassa HOM05D006619 ORTHO05D008351 3.7e-37 159.8 367 33.5
Ca_25054_v3 Cicer arietinum L. HOM05D006619 ORTHO05D008351 4.9e-37 159.5 348 36.8
Gohir.A08G148300 Gossypium hirsutum HOM05D006619 ORTHO05D008351 4.9e-37 159.5 314 35.0
ClCG11G016190 Citrullus lanatus HOM05D006619 ORTHO05D008351 2.4e-36 157.1 346 33.5
Manes.17G002400 Manihot esculenta HOM05D006619 ORTHO05D008351 2.4e-36 157.1 341 34.6
COL.COLO4_16736 Corchorus olitorius HOM05D006619 ORTHO05D008351 2.0e-35 154.1 361 31.0
Lalb_Chr16g0380481 Lupinus albus HOM05D006619 ORTHO05D008351 2.7e-35 153.7 347 31.7
Sabra01G0179200 Salix brachista HOM05D006619 ORTHO05D008351 7.8e-35 152.1 359 33.1
Sc07g0008130 Simmondsia chinensis HOM05D006619 ORTHO05D008351 7.8e-35 152.1 310 35.8
Nitab4.5_0000975g0010 Nicotiana tabacum HOM05D006619 ORTHO05D008351 1.0e-34 151.8 369 32.2
PGSC0003DMG400020810 Solanum tuberosum HOM05D006619 ORTHO05D008351 1.3e-34 151.4 349 32.1
Lj8A366T23 Lonicera japonica HOM05D006619 ORTHO05D008351 5.0e-34 149.4 295 36.9
Peaxi162Scf00014g02116 Petunia axillaris HOM05D006619 ORTHO05D008351 6.6e-34 149.1 358 31.0
AUR62017411 Chenopodium quinoa HOM05D006619 ORTHO05D008351 8.6e-34 148.7 316 34.5
Sopen08g023780 Solanum pennellii HOM05D006619 ORTHO05D008351 8.6e-34 148.7 349 32.7
PSO017G2194 Papaver somniferum HOM05D006619 ORTHO05D008351 1.5e-33 147.9 343 33.8
AUR62010492 Chenopodium quinoa HOM05D006619 ORTHO05D008351 1.9e-33 147.5 315 35.6
Rhsim07G0140900 Rhododendron simsii HOM05D006619 ORTHO05D008351 2.5e-33 147.1 362 32.3
Actinidia18172 Actinidia chinensis HOM05D006619 ORTHO05D008351 3.3e-33 146.7 361 31.3
Aqoxy3G01986 Aquilegia oxysepala HOM05D006619 ORTHO05D008351 5.6e-33 146.0 360 32.8
Nitab4.5_0000236g0060 Nicotiana tabacum HOM05D006619 ORTHO05D008351 9.5e-33 145.2 371 31.5
MELO3C010535.2 Cucumis melo HOM05D006619 ORTHO05D008351 1.2e-32 144.8 282 34.8
arahy.Tifrunner.gnm1.ann1.7E2RQS Arachis hypogaea HOM05D006619 ORTHO05D008351 1.4e-31 141.4 320 35.9
arahy.Tifrunner.gnm1.ann1.TY5C82 Arachis hypogaea HOM05D006619 ORTHO05D008351 1.4e-31 141.4 320 35.9
Solyc08g075150.3 Solanum lycopersicum HOM05D006619 ORTHO05D008351 3.1e-31 140.2 346 32.1
CDE01G0342 Ceratophyllum demersum HOM05D006619 ORTHO05D008351 8.9e-31 138.7 327 32.4
CANSAT35G0271 Cannabis sativa HOM05D006619 ORTHO05D008351 1.2e-30 138.3 306 35.3
CsaV3_4G014810 Cucumis sativus L. HOM05D006619 ORTHO05D008351 1.5e-30 137.9 278 33.5
ECA246G4124 Erigeron canadensis HOM05D006619 ORTHO05D008351 7.5e-30 135.6 320 33.8
DCAR_004540 Daucus carota HOM05D006619 ORTHO05D008351 8.3e-29 132.1 372 28.2
Nn1g09329 Nelumbo nucifera HOM05D006619 ORTHO05D008351 1.4e-28 131.3 121 57.9
Phvul.002G123000 Phaseolus vulgaris HOM05D006619 ORTHO05D008351 1.4e-28 131.3 326 32.8
Migut.E01382 Erythranthe guttata HOM05D006619 ORTHO05D008351 1.9e-28 131.0 321 33.3
Sed0005654 Sechium edule HOM05D006619 ORTHO05D008351 4.1e-28 129.8 275 33.8
VMungo1215G3049 Vigna mungo HOM05D006619 ORTHO05D008351 7.0e-28 129.0 318 30.8
Cc08_g06080 Coffea canephora HOM05D006619 ORTHO05D008351 1.2e-27 128.3 337 32.3
Dinv09413 Davidia involucrata HOM05D006619 ORTHO05D008351 2.0e-27 127.5 321 32.7
Ah.12g058350 Amaranthus hybridus HOM05D006619 ORTHO05D008351 3.5e-27 126.7 303 31.0
Potri.004G234300 Populus trichocarpa HOM05D006619 ORTHO05D008351 3.5e-27 126.7 264 35.6
SHI32758 Sapria himalayana HOM05D006619 ORTHO05D008351 3.5e-27 126.7 353 28.3
ATR0568G188 Amborella trichopoda HOM05D006619 ORTHO05D008351 6.0e-27 125.9 327 33.3
CSS0018284 Camellia sinensis var. sinensis HOM05D006619 ORTHO05D008351 6.0e-27 125.9 269 37.2
Manes.15G190475 Manihot esculenta HOM05D006619 ORTHO05D008351 2.3e-26 124.0 204 41.7
EL10Ac5g12595 Beta vulgaris HOM05D006619 ORTHO05D008351 1.9e-25 120.9 285 33.7
Hund14312 Selenicereus undatus HOM05D006619 ORTHO05D008351 4.3e-25 119.8 232 37.1
Sed0000478 Sechium edule HOM05D006619 ORTHO05D008351 4.7e-24 116.3 344 30.2
Haze_08039 Corylus avellana HOM05D006619 ORTHO05D008351 1.4e-23 114.8 239 35.1
Haze_08049 Corylus avellana HOM05D006619 ORTHO05D008351 5.2e-23 112.8 238 35.3
QL12p003333 Quercus lobata HOM05D006619 ORTHO05D008351 1.5e-22 111.3 100 59.0
Oeu045949.2 Olea europaea HOM05D006619 ORTHO05D008351 5.8e-22 109.4 110 51.8
SEGI_11154 Sequoiadendron giganteum HOM05D006619 ORTHO05D008351 1.3e-21 108.2 130 47.7
SGA_v2.0_scaffold121G33054 Striga asiatica HOM05D006619 ORTHO05D008351 2.2e-21 107.5 305 31.1
Cpa.g.sc137.4 Carica papaya HOM05D006619 ORTHO05D008351 1.6e-19 101.3 265 28.7
SalBow1G1985 Salvia bowleyana HOM05D006619 ORTHO05D008351 2.1e-19 100.9 314 37.9
SalBow8G3333 Salvia bowleyana HOM05D006619 ORTHO05D008351 3.5e-19 100.1 314 37.9
Zm00001eb140380 Zea mays HOM05D006619 ORTHO05D008351 1.5e-14 84.7 248 29.0
AagrBONN_evm.TU.Sc2ySwM_344.2089 Anthoceros agrestis HOM05D006619 ORTHO05D008351 4.4e-14 83.2 251 29.5
SMO367G0687 Selaginella moellendorffii HOM05D003392 ORTHO05D003801 5.8e-14 82.8 259 27.8
HPP92_015143 Vanilla planifolia HOM05D000346 ORTHO05D004932 1.3e-13 81.6 88 53.4
Pp3c25_50 Physcomitrium patens HOM05D006619 ORTHO05D008351 4.9e-13 79.7 301 27.6
AagrBONN_evm.TU.Sc2ySwM_117.1666 Anthoceros agrestis HOM05D006619 ORTHO05D008351 4.1e-12 76.6 305 28.9
EL10Ac5g12596 Beta vulgaris HOM05D006619 ORTHO05D008351 3.9e-10 70.1 87 41.4
Os01g0962100 Oryza sativa ssp. japonica HOM05D006619 ORTHO05D008351 8.7e-10 68.9 259 27.4
QL12p003340 Quercus lobata HOM05D006619 ORTHO05D008351 2.5e-09 67.4 128 34.4
COL.COLO4_16514 Corchorus olitorius HOM05D006619 ORTHO05D008351 1.5e-06 58.2 78 38.5


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