Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB07g30539 Brassica carinata HOM05D000233 ORTHO05D000020 2.2e-48 195.3 96 100.0
BcaB07g30540 Brassica carinata HOM05D000233 ORTHO05D000020 2.2e-48 195.3 96 100.0
BolC2t10520H Brassica oleracea HOM05D000233 ORTHO05D000020 8.3e-40 166.8 90 92.2
BraA02t07863Z Brassica rapa HOM05D000233 ORTHO05D000020 8.3e-40 166.8 90 92.2
A02p28280 Brassica napus HOM05D000233 ORTHO05D000020 3.2e-39 164.9 90 91.1
C02p44770 Brassica napus HOM05D000233 ORTHO05D000020 7.0e-39 163.7 90 91.1
Sp2g09030 Schrenkiella parvula HOM05D000233 ORTHO05D000020 7.3e-36 153.7 96 79.2
Thhalv10003431m.g Eutrema salsugineum HOM05D000233 ORTHO05D000020 4.7e-35 151.0 96 77.1
BcaC03g16644 Brassica carinata HOM05D000233 ORTHO05D000020 5.0e-29 131.0 71 88.7
CARHR179030 Cardamine hirsuta HOM05D000233 ORTHO05D000020 6.2e-27 124.0 96 66.7
AL8G15810 Arabidopsis lyrata HOM05D000233 ORTHO05D000020 3.1e-26 121.7 91 71.4
AT5G44210 Arabidopsis thaliana HOM05D000233 ORTHO05D000020 2.6e-25 118.6 92 69.6
Carub.0008s0431 Capsella rubella HOM05D000233 ORTHO05D000020 2.6e-25 118.6 95 67.4
Aa31LG5G3030 Aethionema arabicum HOM05D000233 ORTHO05D000020 3.4e-25 118.2 104 62.5
THA.LOC104826039 Tarenaya hassleriana HOM05D000233 ORTHO05D000020 1.2e-19 99.8 91 53.8
CARHR003130 Cardamine hirsuta HOM05D000233 ORTHO05D000020 2.4e-10 68.9 72 50.0
BcaC05g24507 Brassica carinata HOM05D000233 ORTHO05D000020 3.1e-10 68.6 79 49.4
C05p02150 Brassica napus HOM05D000233 ORTHO05D000020 3.1e-10 68.6 79 49.4
BolC5t28993H Brassica oleracea HOM05D000233 ORTHO05D000020 3.1e-10 68.6 79 49.4
BraA10t42501Z Brassica rapa HOM05D000233 ORTHO05D000020 2.0e-09 65.9 79 48.1
A10p02340 Brassica napus HOM05D000233 ORTHO05D000020 2.6e-09 65.5 79 48.1
Gohir.D02G178500 Gossypium hirsutum HOM05D000233 ORTHO05D000020 3.4e-09 65.1 102 39.2
Gorai.005G200200 Gossypium raimondii HOM05D000233 ORTHO05D000020 3.4e-09 65.1 102 39.2
QL08p039844 Quercus lobata HOM05D000233 ORTHO05D000020 7.6e-09 63.9 120 40.0
QL93p0206_0058 Quercus lobata HOM05D000233 ORTHO05D000020 7.6e-09 63.9 120 40.0
Gohir.A03G155300 Gossypium hirsutum HOM05D000233 ORTHO05D000020 1.7e-08 62.8 102 38.2
Thecc.02G184000 Theobroma cacao HOM05D000233 ORTHO05D000020 3.8e-08 61.6 100 39.0
AL1G13360 Arabidopsis lyrata HOM05D000233 ORTHO05D000020 4.9e-08 61.2 84 45.2
Duzib052G1253 Durio zibethinus HOM05D000233 ORTHO05D000020 1.9e-07 59.3 99 38.4
Duzib248G0810 Durio zibethinus HOM05D000233 ORTHO05D000020 1.9e-07 59.3 100 39.0
Duzib155G0001 Durio zibethinus HOM05D000233 ORTHO05D000020 2.4e-07 58.9 99 39.4
Thhalv10008830m.g Eutrema salsugineum HOM05D000233 ORTHO05D000020 4.6e-06 54.7 102 42.2


User provided reference genes

Program Settings