Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB07g30229 Brassica carinata HOM05D004862 ORTHO05D005841 6.3e-282 973.4 474 100.0
BolC2t11381H Brassica oleracea HOM05D004862 ORTHO05D005841 8.5e-271 936.4 474 95.8
BraA02t08465Z Brassica rapa HOM05D004862 ORTHO05D005841 5.5e-270 933.7 474 95.1
Thhalv10004120m.g Eutrema salsugineum HOM05D004862 ORTHO05D005841 1.2e-267 926.0 478 93.5
BcaC03g17366 Brassica carinata HOM05D004862 ORTHO05D005841 9.8e-267 922.9 498 91.2
C07p35450 Brassica napus HOM05D004862 ORTHO05D005841 9.1e-265 916.4 475 93.7
BolC7t44069H Brassica oleracea HOM05D004862 ORTHO05D005841 9.1e-265 916.4 475 93.7
AL5G15180 Arabidopsis lyrata HOM05D004862 ORTHO05D005841 2.0e-264 915.2 478 92.9
A06p42030 Brassica napus HOM05D004862 ORTHO05D005841 2.0e-264 915.2 475 93.5
AT3G26410 Arabidopsis thaliana HOM05D004862 ORTHO05D005841 5.9e-264 913.7 478 92.5
Sp2g15560 Schrenkiella parvula HOM05D004862 ORTHO05D005841 7.7e-264 913.3 478 92.5
BraA06t27120Z Brassica rapa HOM05D004862 ORTHO05D005841 1.3e-263 912.5 475 93.3
CARHR147430 Cardamine hirsuta HOM05D004862 ORTHO05D005841 2.5e-262 908.3 480 92.5
Carub.0005s0438 Capsella rubella HOM05D004862 ORTHO05D005841 3.6e-261 904.4 478 91.8
C02p53070 Brassica napus HOM05D004862 ORTHO05D005841 4.7e-253 877.5 498 88.2
Aa31LG2G6120 Aethionema arabicum HOM05D004862 ORTHO05D005841 4.4e-251 870.9 478 87.9
BcaNung06886 Brassica carinata HOM05D004862 ORTHO05D005841 2.3e-247 858.6 484 88.4
THA.LOC104818254 Tarenaya hassleriana HOM05D004862 ORTHO05D005841 3.1e-228 795.0 478 80.3
A02p34570 Brassica napus HOM05D004862 ORTHO05D005841 2.9e-226 788.5 410 93.9
CiPaw.13G145700 Carya illinoinensis HOM05D004862 ORTHO05D005841 5.4e-217 757.7 486 74.5
arahy.Tifrunner.gnm1.ann1.WE1E8S Arachis hypogaea HOM05D004862 ORTHO05D005841 4.6e-216 754.6 484 74.0
Manes.14G165200 Manihot esculenta HOM05D004862 ORTHO05D005841 4.6e-216 754.6 474 74.7
Cfa010154 Carpinus fangiana HOM05D004862 ORTHO05D005841 6.0e-216 754.2 479 74.3
arahy.Tifrunner.gnm1.ann1.34Q84K Arachis hypogaea HOM05D004862 ORTHO05D005841 7.8e-216 753.8 484 74.0
DCAR_021834 Daucus carota HOM05D004862 ORTHO05D005841 1.3e-215 753.1 483 72.7
Glyma.08G075600 Glycine max HOM05D004862 ORTHO05D005841 1.3e-215 753.1 484 73.3
Phvul.002G205600 Phaseolus vulgaris HOM05D004862 ORTHO05D005841 1.3e-215 753.1 484 73.3
FAN14G5837 Fragaria x ananassa HOM05D004862 ORTHO05D005841 1.7e-215 752.7 478 73.6
Haze_23539 Corylus avellana HOM05D004862 ORTHO05D005841 2.3e-215 752.3 479 74.5
Dinv24234 Davidia involucrata HOM05D004862 ORTHO05D005841 6.6e-215 750.7 488 72.3
FAN14G4788 Fragaria x ananassa HOM05D004862 ORTHO05D005841 6.6e-215 750.7 478 73.4
Thecc.02G156500 Theobroma cacao HOM05D004862 ORTHO05D005841 1.5e-214 749.6 486 73.0
Lj4g0019477 Lotus japonicus HOM05D004862 ORTHO05D005841 2.5e-214 748.8 485 73.0
Duzib132G0210 Durio zibethinus HOM05D004862 ORTHO05D005841 7.3e-214 747.3 486 72.2
Gohir.A01G012300 Gossypium hirsutum HOM05D004862 ORTHO05D005841 9.6e-214 746.9 486 72.2
MD12G1223100 Malus domestica HOM05D004862 ORTHO05D005841 9.6e-214 746.9 482 72.4
FvH4_6g05370 Fragaria vesca HOM05D004862 ORTHO05D005841 1.3e-213 746.5 478 73.0
Solyc10g047120.2 Solanum lycopersicum HOM05D004862 ORTHO05D005841 1.3e-213 746.5 482 72.8
FAN05G4126 Fragaria x ananassa HOM05D004862 ORTHO05D005841 1.6e-213 746.1 478 73.0
Nitab4.5_0005079g0020 Nicotiana tabacum HOM05D004862 ORTHO05D005841 2.1e-213 745.7 491 72.3
Sopen10g017280 Solanum pennellii HOM05D004862 ORTHO05D005841 2.8e-213 745.3 482 72.4
Nitab4.5_0000078g0200 Nicotiana tabacum HOM05D004862 ORTHO05D005841 3.6e-213 745.0 491 71.9
RcHm_v2.0_Chr3g0454151 Rosa chinensis HOM05D004862 ORTHO05D005841 3.6e-213 745.0 478 72.8
Glyma.05G121000 Glycine max HOM05D004862 ORTHO05D005841 6.2e-213 744.2 484 72.1
Lalb_Chr07g0189371 Lupinus albus HOM05D004862 ORTHO05D005841 6.2e-213 744.2 488 73.6
FAN02G3155 Fragaria x ananassa HOM05D004862 ORTHO05D005841 1.8e-212 742.7 478 73.0
CAN.G1.65 Capsicum annuum HOM05D004862 ORTHO05D005841 4.0e-212 741.5 477 72.1
Gohir.D13G060400 Gossypium hirsutum HOM05D004862 ORTHO05D005841 4.0e-212 741.5 483 73.3
Prupe.6G329700 Prunus persica HOM05D004862 ORTHO05D005841 1.5e-211 739.6 480 72.3
Sed0027136 Sechium edule HOM05D004862 ORTHO05D005841 1.5e-211 739.6 477 74.6
CSS0027197 Camellia sinensis var. sinensis HOM05D004862 ORTHO05D005841 2.0e-211 739.2 495 70.3
Ca_29818_v3 Cicer arietinum L. HOM05D004862 ORTHO05D005841 2.6e-211 738.8 485 72.8
Gorai.002G015300 Gossypium raimondii HOM05D004862 ORTHO05D005841 2.6e-211 738.8 486 71.8
CSS0014529 Camellia sinensis var. sinensis HOM05D004862 ORTHO05D005841 3.4e-211 738.4 495 70.3
COL.COLO4_33088 Corchorus olitorius HOM05D004862 ORTHO05D005841 3.4e-211 738.4 486 71.6
MELO3C012691.2 Cucumis melo HOM05D004862 ORTHO05D005841 5.8e-211 737.6 481 74.4
Gorai.013G068500 Gossypium raimondii HOM05D004862 ORTHO05D005841 7.6e-211 737.3 497 71.6
TWI23G0249 Tripterygium wilfordii HOM05D004862 ORTHO05D005841 7.6e-211 737.3 476 72.9
VMungo0251G1232 Vigna mungo HOM05D004862 ORTHO05D005841 7.6e-211 737.3 509 69.7
Lsat_1_v5_gn_9_117961 Lactuca sativa HOM05D004862 ORTHO05D005841 9.9e-211 736.9 482 72.2
Aqoxy6G00342 Aquilegia oxysepala HOM05D004862 ORTHO05D005841 2.2e-210 735.7 479 72.9
Medtr4g094315 Medicago truncatula HOM05D004862 ORTHO05D005841 3.8e-210 734.9 483 72.5
ClCG09G014610 Citrullus lanatus HOM05D004862 ORTHO05D005841 6.4e-210 734.2 480 73.5
Psat7g096360 Pisum sativum HOM05D004862 ORTHO05D005841 1.1e-209 733.4 483 71.6
FAN09G3019 Fragaria x ananassa HOM05D004862 ORTHO05D005841 1.4e-209 733.0 478 72.0
Nn1g06191 Nelumbo nucifera HOM05D004862 ORTHO05D005841 1.4e-209 733.0 483 71.8
PGR042G3925 Punica granatum HOM05D004862 ORTHO05D005841 4.2e-209 731.5 483 71.8
Cc02_g18820 Coffea canephora HOM05D004862 ORTHO05D005841 5.4e-209 731.1 484 71.7
Rhsim11G0133700 Rhododendron simsii HOM05D004862 ORTHO05D005841 9.3e-209 730.3 491 70.3
HanXRQChr03g0065771 Helianthus annuus HOM05D004862 ORTHO05D005841 1.2e-208 729.9 475 71.6
PGSC0003DMG400017691 Solanum tuberosum HOM05D004862 ORTHO05D005841 1.2e-208 729.9 518 67.8
CANSAT54G0577 Cannabis sativa HOM05D004862 ORTHO05D005841 6.0e-208 727.6 486 72.4
Ciclev10015108m.g Citrus clementina HOM05D004862 ORTHO05D005841 2.3e-207 725.7 475 72.2
Lj5A244T54 Lonicera japonica HOM05D004862 ORTHO05D005841 2.3e-207 725.7 479 71.0
SGA_v2.0_scaffold332G48937 Striga asiatica HOM05D004862 ORTHO05D005841 3.9e-207 724.9 477 72.3
Gohir.D01G013500 Gossypium hirsutum HOM05D004862 ORTHO05D005841 5.1e-207 724.5 463 72.6
CDE02G2941 Ceratophyllum demersum HOM05D004862 ORTHO05D005841 1.9e-206 722.6 478 72.2
Oeu000228.1 Olea europaea HOM05D004862 ORTHO05D005841 4.3e-206 721.5 479 70.8
Hund06875 Selenicereus undatus HOM05D004862 ORTHO05D005841 5.6e-206 721.1 490 69.2
Ah.04g163010 Amaranthus hybridus HOM05D004862 ORTHO05D005841 9.6e-206 720.3 482 69.9
CsaV3_7G022230 Cucumis sativus L. HOM05D004862 ORTHO05D005841 2.1e-205 719.2 454 75.8
Sc09g0004450 Simmondsia chinensis HOM05D004862 ORTHO05D005841 2.8e-205 718.8 479 70.6
Potri.001G207000 Populus trichocarpa HOM05D004862 ORTHO05D005841 3.6e-205 718.4 475 71.6
AUR62003397 Chenopodium quinoa HOM05D004862 ORTHO05D005841 6.2e-205 717.6 485 69.7
Gohir.A13G061500 Gossypium hirsutum HOM05D004862 ORTHO05D005841 6.9e-204 714.1 462 72.9
PSO675G5038 Papaver somniferum HOM05D004862 ORTHO05D005841 3.4e-203 711.8 483 70.8
ECA240G2004 Erigeron canadensis HOM05D004862 ORTHO05D005841 5.8e-203 711.1 473 70.8
QL01p020593 Quercus lobata HOM05D004862 ORTHO05D005841 9.9e-203 710.3 573 61.4
PSO541G6054 Papaver somniferum HOM05D004862 ORTHO05D005841 5.5e-201 704.5 488 70.1
EL10Ac4g08938 Beta vulgaris HOM05D004862 ORTHO05D005841 1.2e-200 703.4 485 68.5
ATR1136G066 Amborella trichopoda HOM05D004862 ORTHO05D005841 3.5e-200 701.8 487 68.8
MSTRG.16558 Avicennia marina HOM05D004862 ORTHO05D005841 2.3e-199 699.1 477 70.2
vmacro01803 Vaccinium macrocarpon HOM05D004862 ORTHO05D005841 6.7e-199 697.6 572 61.2
Lj9A317G73 Lonicera japonica HOM05D004862 ORTHO05D005841 1.9e-198 696.0 490 67.1
Migut.B00646 Erythranthe guttata HOM05D004862 ORTHO05D005841 2.5e-198 695.7 477 68.6
Os02g0556400 Oryza sativa ssp. japonica HOM05D004862 ORTHO05D005841 7.4e-198 694.1 481 68.2
MBI06_g20970_MAGBIO Magnolia biondii HOM05D004862 ORTHO05D005841 6.2e-197 691.0 487 68.6
Sabra01G0160300 Salix brachista HOM05D004862 ORTHO05D005841 2.1e-192 676.0 559 60.6
SalBow5G3806 Salvia bowleyana HOM05D004862 ORTHO05D005841 6.3e-189 664.5 567 59.6
AUR62004780 Chenopodium quinoa HOM05D004862 ORTHO05D005841 1.5e-187 659.8 541 61.6
SHI16537 Sapria himalayana HOM05D004862 ORTHO05D005841 1.0e-186 657.1 475 65.7
GSVIVG01029751001 Vitis vinifera HOM05D004862 ORTHO05D005841 1.0e-186 657.1 477 66.2
SalBow5G4932 Salvia bowleyana HOM05D004862 ORTHO05D005841 5.0e-186 654.8 592 57.1
Eucgr.G00660 Eucalyptus grandis HOM05D004862 ORTHO05D005841 8.5e-186 654.1 411 74.9
Peaxi162Scf00003g03739 Petunia axillaris HOM05D004862 ORTHO05D005841 5.5e-185 651.4 410 75.1
BcaC03g17340 Brassica carinata HOM05D004862 ORTHO05D005841 4.6e-184 648.3 360 90.3
BolC2t11366H Brassica oleracea HOM05D004862 ORTHO05D005841 1.8e-180 636.3 332 94.6
C02p53050 Brassica napus HOM05D004862 ORTHO05D005841 5.3e-180 634.8 324 95.7
Mapoly0006s0193 Marchantia polymorpha HOM05D004862 ORTHO05D005841 2.4e-172 609.4 479 60.8
SEGI_34202 Sequoiadendron giganteum HOM05D004862 ORTHO05D005841 6.9e-172 607.8 421 67.9
Ciclev10008412m.g Citrus clementina HOM05D004862 ORTHO05D005841 1.7e-170 603.2 443 65.2
C02p52870 Brassica napus HOM05D004862 ORTHO05D005841 2.0e-163 579.7 326 89.6
TAR116G0002 Trochodendron aralioides HOM05D004862 ORTHO05D005841 7.7e-163 577.8 374 72.7
SMO115G0021 Selaginella moellendorffii HOM05D004862 ORTHO05D005841 1.7e-162 576.6 479 57.6
HPP92_004639 Vanilla planifolia HOM05D004862 ORTHO05D005841 2.7e-160 569.3 373 70.5
Pp3c13_18080 Physcomitrium patens HOM05D004862 ORTHO05D005841 4.0e-159 565.5 493 55.0
Atru.chr6.1121 Acer truncatum HOM05D004862 ORTHO05D005841 6.7e-159 564.7 360 75.3
HPP92_004630 Vanilla planifolia HOM05D004862 ORTHO05D005841 1.5e-158 563.5 373 70.0
TPR.G31479 Trifolium pratense HOM05D004862 ORTHO05D005841 1.7e-154 550.1 342 74.3
Cpa.g.sc845.1 Carica papaya HOM05D004862 ORTHO05D005841 1.2e-150 537.3 326 79.4
FAN05G4337 Fragaria x ananassa HOM05D004862 ORTHO05D005841 4.8e-149 531.9 327 77.1
TAR628G0283 Trochodendron aralioides HOM05D004862 ORTHO05D005841 1.6e-147 526.9 327 77.1
CBR_g37214 Chara braunii HOM05D004862 ORTHO05D005841 2.8e-144 516.2 481 53.6
Zm00001eb243830 Zea mays HOM05D004862 ORTHO05D005841 2.0e-139 500.0 327 74.0
CsaV3_7G014980 Cucumis sativus L. HOM05D004862 ORTHO05D005841 2.7e-131 473.0 296 75.3
SEGI_00112 Sequoiadendron giganteum HOM05D004862 ORTHO05D005841 2.3e-130 469.9 351 66.4
CsaV3_UNG189490 Cucumis sativus L. HOM05D004862 ORTHO05D005841 1.0e-98 364.8 222 77.0
MCO05G740 Micromonas commoda HOM05D004862 ORTHO05D005841 3.3e-97 359.8 441 43.1
Cre08.g359100 Chlamydomonas reinhardtii HOM05D004862 ORTHO05D005841 5.3e-95 352.4 445 42.7
PRCOL_00003583 Prasinoderma coloniale HOM05D004862 ORTHO05D005841 2.1e-88 330.5 422 42.7
Ca_29817_v3 Cicer arietinum L. HOM05D004862 ORTHO05D005841 2.4e-87 327.0 211 74.9
unitig_26.g9584 Utricularia gibba HOM05D004862 ORTHO05D005841 3.7e-80 303.1 223 60.1
Ca_25384_v3 Cicer arietinum L. HOM05D004862 ORTHO05D005841 3.9e-74 283.1 189 73.0
CsaV3_7G015000 Cucumis sativus L. HOM05D004862 ORTHO05D005841 5.7e-73 279.3 159 83.0
CsaV3_UNG187480 Cucumis sativus L. HOM05D004862 ORTHO05D005841 5.7e-73 279.3 159 83.0
CsaV3_7G014960 Cucumis sativus L. HOM05D004862 ORTHO05D005841 2.6e-70 270.4 159 81.8
unitig_26.g9585 Utricularia gibba HOM05D004862 ORTHO05D005841 4.3e-65 253.1 145 76.6
Cfa021801 Carpinus fangiana HOM05D004862 ORTHO05D005841 5.3e-55 219.5 413 33.4
BolC2t11379H Brassica oleracea HOM05D004862 ORTHO05D005841 4.1e-47 193.4 119 82.4
CsaV3_7G014970 Cucumis sativus L. HOM05D004862 ORTHO05D005841 1.4e-42 178.3 94 88.3
CsaV3_7G015010 Cucumis sativus L. HOM05D004862 ORTHO05D005841 3.0e-42 177.2 93 89.2
Ca_31280_v3 Cicer arietinum L. HOM05D004862 ORTHO05D005841 3.3e-41 173.7 106 77.4
CsaV3_UNG197500 Cucumis sativus L. HOM05D004862 ORTHO05D005841 1.7e-40 171.4 106 80.2
AagrBONN_evm.TU.Sc2ySwM_344.4621 Anthoceros agrestis HOM05D004862 ORTHO05D005841 1.1e-36 158.7 135 54.1
Potri.003G022650 Populus trichocarpa HOM05D004862 ORTHO05D005841 8.6e-29 132.5 91 69.2
CsaV3_7G014950 Cucumis sativus L. HOM05D004862 ORTHO05D005841 3.4e-17 94.0 65 63.1
TAR628G0087 Trochodendron aralioides HOM05D004862 ORTHO05D005841 4.4e-17 93.6 67 56.7
Actinidia00239 Actinidia chinensis HOM05D004862 ORTHO05D005841 5.8e-17 93.2 87 52.9
Potri.003G022701 Populus trichocarpa HOM05D004862 ORTHO05D005841 2.4e-15 87.8 76 60.5
unitig_26.g9586 Utricularia gibba HOM05D004862 ORTHO05D005841 4.1e-15 87.0 68 66.2
Cfa010153 Carpinus fangiana HOM05D004862 ORTHO05D005841 2.0e-14 84.7 70 60.0
MCO05G371 Micromonas commoda HOM05D004862 ORTHO05D267887 3.2e-07 60.8 130 33.1
Dinv28090 Davidia involucrata HOM05D000259 ORTHO05D000155 2.1e-06 58.2 34 70.6


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