Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB07g30085 Brassica carinata HOM05D000475 ORTHO05D000343 7.6e-55 216.9 104 100.0
BcaB07g29811 Brassica carinata HOM05D000475 ORTHO05D000343 1.5e-23 112.8 54 98.1
BcaB07g29813 Brassica carinata HOM05D000475 ORTHO05D000343 1.5e-23 112.8 54 98.1
BcaC03g18106 Brassica carinata HOM05D000475 ORTHO05D000343 4.5e-23 111.3 54 96.3
A02p41790 Brassica napus HOM05D000475 ORTHO05D000343 4.5e-23 111.3 54 96.3
C02p61730 Brassica napus HOM05D000475 ORTHO05D000343 4.5e-23 111.3 54 96.3
BolC2t12228H Brassica oleracea HOM05D000475 ORTHO05D000343 4.5e-23 111.3 54 96.3
BraA02t09119Z Brassica rapa HOM05D000475 ORTHO05D000343 4.5e-23 111.3 54 96.3
Sp2g25100 Schrenkiella parvula HOM05D000475 ORTHO05D000343 6.5e-22 107.5 54 92.6
Thhalv10003523m.g Eutrema salsugineum HOM05D001469 ORTHO05D001648 1.1e-21 106.7 54 90.7
Carub.0008s2259 Capsella rubella HOM05D000475 ORTHO05D000343 3.0e-19 98.6 54 85.2
CARHR275670 Cardamine hirsuta HOM05D000475 ORTHO05D000343 3.0e-19 98.6 54 83.3
AL8G38670 Arabidopsis lyrata HOM05D000475 ORTHO05D000343 9.7e-18 93.6 54 81.5
AT5G61910 Arabidopsis thaliana HOM05D001469 ORTHO05D001648 9.7e-18 93.6 54 81.5
Aa31LG11G1600 Aethionema arabicum HOM05D000475 ORTHO05D000343 1.3e-17 93.2 54 81.5
THA.LOC104804658 Tarenaya hassleriana HOM05D001469 ORTHO05D001648 5.9e-15 84.3 54 70.4
BcaNung07177 Brassica carinata HOM05D000475 ORTHO05D000343 3.2e-13 78.6 36 91.7
A06p28590 Brassica napus HOM05D000475 ORTHO05D000343 1.4e-11 73.2 74 54.1
Cpa.g.sc13.173 Carica papaya HOM05D000475 ORTHO05D000343 2.2e-09 65.9 50 60.0
TWI23G0492 Tripterygium wilfordii HOM05D001469 ORTHO05D001648 2.6e-07 58.9 47 59.6
COL.COLO4_37256 Corchorus olitorius HOM05D000475 ORTHO05D000343 3.4e-07 58.5 74 50.0
Peaxi162Scf00207g00142 Petunia axillaris HOM05D000475 ORTHO05D000343 3.4e-07 58.5 48 58.3
Manes.14G044900 Manihot esculenta HOM05D000475 ORTHO05D000343 4.5e-07 58.2 43 62.8
TAR622G0630 Trochodendron aralioides HOM05D000475 ORTHO05D000343 4.5e-07 58.2 50 58.0
HanXRQChr02g0034351 Helianthus annuus HOM05D000475 ORTHO05D000343 5.9e-07 57.8 56 50.0
Dinv13722 Davidia involucrata HOM05D000475 ORTHO05D000343 1.0e-06 57.0 49 53.1
Dinv23224 Davidia involucrata HOM05D000475 ORTHO05D000343 1.3e-06 56.6 48 56.2
Prupe.1G215000 Prunus persica HOM05D000475 ORTHO05D000343 2.2e-06 55.8 49 57.1
MD00G1177300 Malus domestica HOM05D000475 ORTHO05D000343 2.9e-06 55.5 45 60.0
vmacro18381 Vaccinium macrocarpon HOM05D000475 ORTHO05D000343 2.9e-06 55.5 49 57.1
CAN.G1089.26 Capsicum annuum HOM05D000475 ORTHO05D000343 3.8e-06 55.1 48 54.2
Solyc06g068850.4 Solanum lycopersicum HOM05D000475 ORTHO05D000343 5.0e-06 54.7 48 54.2
Atru.chr2.595 Acer truncatum HOM05D000475 ORTHO05D000343 6.5e-06 54.3 48 58.3
DCAR_016340 Daucus carota HOM05D000475 ORTHO05D000343 8.5e-06 53.9 46 54.3
Hma1.2p1_0577F.1_g182270 Hydrangea macrophylla HOM05D000475 ORTHO05D000343 8.5e-06 53.9 47 55.3
Sabra01G0105500 Salix brachista HOM05D000475 ORTHO05D000343 8.5e-06 53.9 49 51.0


User provided reference genes

Program Settings