Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB07g29832 Brassica carinata HOM05D000095 ORTHO05D000393 6.0e-55 217.2 108 100.0
BolC2t12201H Brassica oleracea HOM05D000095 ORTHO05D000393 3.0e-38 161.8 99 85.9
BraA02t09099Z Brassica rapa HOM05D000095 ORTHO05D000393 6.7e-38 160.6 99 85.9
C02p61510 Brassica napus HOM05D000095 ORTHO05D000393 1.9e-37 159.1 99 84.8
A02p41570 Brassica napus HOM05D000095 ORTHO05D000393 4.3e-37 157.9 99 84.8
A03p47230 Brassica napus HOM05D000095 ORTHO05D000393 3.7e-36 154.8 100 82.0
BraA03t13850Z Brassica rapa HOM05D000095 ORTHO05D000393 3.7e-36 154.8 100 82.0
BcaC06g33144 Brassica carinata HOM05D000095 ORTHO05D000393 1.4e-32 142.9 100 77.0
AL8G38360 Arabidopsis lyrata HOM05D000095 ORTHO05D000393 7.2e-32 140.6 100 77.0
BolC7t45055H Brassica oleracea HOM05D000095 ORTHO05D000393 7.2e-32 140.6 100 78.0
Thhalv10005259m.g Eutrema salsugineum HOM05D000095 ORTHO05D000393 7.2e-32 140.6 100 78.0
Sp2g24830 Schrenkiella parvula HOM05D000095 ORTHO05D000393 1.6e-31 139.4 100 77.0
C07p45340 Brassica napus HOM05D000095 ORTHO05D000393 2.7e-31 138.7 100 77.0
AT5G61620 Arabidopsis thaliana HOM05D000095 ORTHO05D000393 1.0e-30 136.7 100 75.0
BcaC03g18079 Brassica carinata HOM05D000095 ORTHO05D000393 3.3e-29 131.7 83 84.3
CARHR275420 Cardamine hirsuta HOM05D000095 ORTHO05D000393 2.8e-28 128.6 100 70.0
Carub.0008s2232 Capsella rubella HOM05D000095 ORTHO05D000393 3.1e-27 125.2 100 70.0
THA.LOC104804649 Tarenaya hassleriana HOM05D000095 ORTHO05D000393 1.3e-12 76.6 101 53.5
THA.LOC104820163 Tarenaya hassleriana HOM05D000095 ORTHO05D000393 2.2e-12 75.9 104 54.8
THA.LOC104818511 Tarenaya hassleriana HOM05D000095 ORTHO05D000393 6.3e-12 74.3 100 52.0
Duzib068G1087 Durio zibethinus HOM05D000095 ORTHO05D035088 1.1e-11 73.6 99 45.5
Manes.14G039400 Manihot esculenta HOM05D000095 ORTHO05D000393 1.4e-11 73.2 99 50.5
Aa31LG11G1830 Aethionema arabicum HOM05D000095 ORTHO05D000393 7.0e-11 70.9 102 45.1
RcHm_v2.0_Chr1g0373541 Rosa chinensis HOM05D000095 ORTHO05D000393 1.6e-10 69.7 105 41.9
MELO3C017638.2 Cucumis melo HOM05D000095 ORTHO05D000393 2.6e-10 68.9 115 41.7
TAR374G0352 Trochodendron aralioides HOM05D000095 ORTHO05D000393 2.6e-10 68.9 98 49.0
ClCG07G017060 Citrullus lanatus HOM05D000095 ORTHO05D000393 3.5e-10 68.6 118 39.0
Dinv16873 Davidia involucrata HOM05D000095 ORTHO05D000393 3.5e-10 68.6 98 48.0
Duzib205G0509 Durio zibethinus HOM05D000095 ORTHO05D000393 3.5e-10 68.6 100 46.0
MD07G1247900 Malus domestica HOM05D000095 ORTHO05D000393 4.5e-10 68.2 100 42.0
CsaV3_4G004280 Cucumis sativus L. HOM05D000095 ORTHO05D000393 1.0e-09 67.0 117 39.3
Sed0010972 Sechium edule HOM05D000095 ORTHO05D000393 1.3e-09 66.6 114 41.2
Sed0022911 Sechium edule HOM05D000095 ORTHO05D000393 1.3e-09 66.6 119 42.0
COL.COLO4_37329 Corchorus olitorius HOM05D000095 ORTHO05D000393 6.5e-09 64.3 100 43.0
Rhsim03G0160200 Rhododendron simsii HOM05D000095 ORTHO05D000393 8.5e-09 63.9 98 43.9
MBI04_g22921_MAGBIO Magnolia biondii HOM05D000095 ORTHO05D000393 4.2e-08 61.6 102 42.2
GSVIVG01013871001 Vitis vinifera HOM05D000095 ORTHO05D000393 5.5e-08 61.2 93 40.9
FvH4_7g26850 Fragaria vesca HOM05D000095 ORTHO05D000393 9.4e-08 60.5 105 39.0
FAN06G3122 Fragaria x ananassa HOM05D000095 ORTHO05D000393 9.4e-08 60.5 105 39.0
Prupe.2G271900 Prunus persica HOM05D000095 ORTHO05D000393 9.4e-08 60.5 104 40.4
FAN01G0274 Fragaria x ananassa HOM05D000095 ORTHO05D000393 2.1e-07 59.3 105 39.0
TWI14G0948 Tripterygium wilfordii HOM05D000095 ORTHO05D000393 2.1e-07 59.3 98 40.8
Aqoxy3G02709 Aquilegia oxysepala HOM05D000095 ORTHO05D000393 2.7e-07 58.9 101 42.6
Gorai.006G274300 Gossypium raimondii HOM05D000095 ORTHO05D000393 3.6e-07 58.5 105 41.9
Gohir.A09G249000 Gossypium hirsutum HOM05D000095 ORTHO05D000393 4.7e-07 58.2 105 41.9
Potri.001G080300 Populus trichocarpa HOM05D000095 ORTHO05D000393 4.7e-07 58.2 99 41.4
Duzib084G0660 Durio zibethinus HOM05D000095 ORTHO05D000393 1.4e-06 56.6 99 40.4
Gohir.D09G249900 Gossypium hirsutum HOM05D000095 ORTHO05D000393 1.4e-06 56.6 105 41.0
MD01G1176700 Malus domestica HOM05D000095 ORTHO05D000393 1.4e-06 56.6 100 36.0
PSO717G0055 Papaver somniferum HOM05D000095 ORTHO05D000393 1.8e-06 56.2 99 41.4
Hma1.2p1_0002F.1_g002980 Hydrangea macrophylla HOM05D000095 ORTHO05D000393 3.0e-06 55.5 105 34.3
ATR0705G032 Amborella trichopoda HOM05D000095 ORTHO05D000393 4.0e-06 55.1 108 39.8
PSO675G8208 Papaver somniferum HOM05D000095 ORTHO05D000393 4.0e-06 55.1 99 40.4
TAR636G1410 Trochodendron aralioides HOM05D000095 ORTHO05D000393 5.2e-06 54.7 98 43.9
BcaC08g45846 Brassica carinata HOM05D000095 ORTHO05D000393 8.8e-06 53.9 117 33.3
C06p36370 Brassica napus HOM05D000095 ORTHO05D000393 8.8e-06 53.9 117 33.3
BolC6t38757H Brassica oleracea HOM05D000095 ORTHO05D000393 8.8e-06 53.9 117 33.3
FAN10G2233 Fragaria x ananassa HOM05D000095 ORTHO05D000393 8.8e-06 53.9 105 37.1
Nn6g33816 Nelumbo nucifera HOM05D000095 ORTHO05D000393 8.8e-06 53.9 98 39.8


User provided reference genes

Program Settings