Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB07g29816 Brassica carinata HOM05D003941 ORTHO05D032292 4.1e-122 441.4 227 100.0
BraA02t09115Z Brassica rapa HOM05D003941 ORTHO05D009447 1.0e-75 287.3 221 71.5
BcaC03g18102 Brassica carinata HOM05D003941 ORTHO05D009447 4.9e-75 285.0 222 71.2
C02p61670 Brassica napus HOM05D003941 ORTHO05D009447 4.9e-75 285.0 221 71.0
A02p41750 Brassica napus HOM05D003941 ORTHO05D009447 1.1e-74 283.9 221 70.6
BolC2t12225H Brassica oleracea HOM05D003941 ORTHO05D009447 4.2e-74 282.0 222 70.7
Thhalv10005405m.g Eutrema salsugineum HOM05D003941 ORTHO05D009447 1.3e-43 180.6 221 48.9
CARHR120240 Cardamine hirsuta HOM05D003941 ORTHO05D009447 3.6e-41 172.6 220 45.9
CARHR120610 Cardamine hirsuta HOM05D003941 ORTHO05D032292 8.0e-41 171.4 217 46.1
AL8G38700 Arabidopsis lyrata HOM05D003941 ORTHO05D009447 3.3e-39 166.0 234 45.7
AT2G27630 Arabidopsis thaliana HOM05D003941 ORTHO05D009447 4.8e-38 162.2 230 45.2
AT2G27650 Arabidopsis thaliana HOM05D003941 ORTHO05D009447 9.1e-37 157.9 227 43.2
CARHR120250 Cardamine hirsuta HOM05D003941 ORTHO05D009447 9.1e-37 157.9 219 44.3
AT5G61940 Arabidopsis thaliana HOM05D003941 ORTHO05D009447 1.2e-36 157.5 233 43.3
Carub.0004s0831 Capsella rubella HOM05D003941 ORTHO05D009447 1.6e-36 157.1 227 43.2
AT5G51530 Arabidopsis thaliana HOM05D003941 ORTHO05D009447 1.7e-35 153.7 217 41.9
CARHR275720 Cardamine hirsuta HOM05D003941 ORTHO05D009447 5.0e-35 152.1 222 42.8
AL4G22760 Arabidopsis lyrata HOM05D003941 ORTHO05D009447 2.5e-34 149.8 226 42.9
Thhalv10005598m.g Eutrema salsugineum HOM05D003941 ORTHO05D009447 3.2e-34 149.4 209 43.1
Carub.0004s0829 Capsella rubella HOM05D003941 ORTHO05D009447 1.6e-33 147.1 232 42.2
Thhalv10005669m.g Eutrema salsugineum HOM05D003941 ORTHO05D009447 2.1e-33 146.7 216 42.1
CARHR275710 Cardamine hirsuta HOM05D003941 ORTHO05D009447 4.7e-33 145.6 221 43.0
Carub.0001s4142 Capsella rubella HOM05D003941 ORTHO05D009447 6.1e-33 145.2 224 41.1
Carub.0008s2263 Capsella rubella HOM05D003941 ORTHO05D009447 3.0e-32 142.9 225 43.1
AL8G38710 Arabidopsis lyrata HOM05D003941 ORTHO05D009447 4.0e-32 142.5 217 41.0
CARHR275730 Cardamine hirsuta HOM05D003941 ORTHO05D009447 1.5e-31 140.6 215 40.5
AT5G61950 Arabidopsis thaliana HOM05D003941 ORTHO05D009447 2.0e-31 140.2 220 38.2
Sp2g25130 Schrenkiella parvula HOM05D003941 ORTHO05D009447 6.3e-30 135.2 227 41.4
AT1G52450 Arabidopsis thaliana HOM05D003941 ORTHO05D009447 2.4e-29 133.3 229 40.6
Carub.0008s2262 Capsella rubella HOM05D003941 ORTHO05D009447 5.4e-29 132.1 226 41.6
AT1G52430 Arabidopsis thaliana HOM05D003941 ORTHO05D009447 2.9e-27 126.3 208 39.9
Carub.0008s2264 Capsella rubella HOM05D003941 ORTHO05D009447 1.5e-26 124.0 221 37.6
BcaC03g18107 Brassica carinata HOM05D003941 ORTHO05D009447 5.7e-23 112.1 217 35.0
BolC2t12229H Brassica oleracea HOM05D003941 ORTHO05D009447 5.7e-23 112.1 217 35.0
AL2G20130 Arabidopsis lyrata HOM05D003941 ORTHO05D009447 7.5e-23 111.7 223 38.1
A02p41810 Brassica napus HOM05D003941 ORTHO05D009447 2.2e-22 110.2 217 36.4
C02p61750 Brassica napus HOM05D003941 ORTHO05D009447 2.2e-22 110.2 217 36.4
BraA02t09120Z Brassica rapa HOM05D003941 ORTHO05D009447 6.3e-22 108.6 217 35.9
AL2G19970 Arabidopsis lyrata HOM05D003941 ORTHO05D009447 5.4e-21 105.5 200 36.0
BcaB07g29812 Brassica carinata HOM05D003941 ORTHO05D009447 2.7e-20 103.2 221 37.1
Carub.0002s1061 Capsella rubella HOM05D003941 ORTHO05D009447 1.0e-19 101.3 200 39.0
BcaNung07176 Brassica carinata HOM05D003941 ORTHO05D009447 2.9e-19 99.8 214 32.7
CARHR056690 Cardamine hirsuta HOM05D003941 ORTHO05D032292 5.0e-19 99.0 231 34.2
A02p13070 Brassica napus HOM05D003941 ORTHO05D009447 1.1e-18 97.8 214 32.2
AT1G65130 Arabidopsis thaliana HOM05D003941 ORTHO05D009447 1.5e-18 97.4 202 36.6
BraA02t06363Z Brassica rapa HOM05D003941 ORTHO05D009447 4.3e-18 95.9 214 31.3
CARHR056630 Cardamine hirsuta HOM05D003941 ORTHO05D009447 4.3e-18 95.9 223 33.2
SpUn0054_0050 Schrenkiella parvula HOM05D003941 ORTHO05D009447 5.6e-18 95.5 223 32.7
CARHR038560 Cardamine hirsuta HOM05D003941 ORTHO05D009447 1.2e-17 94.4 223 31.8
CARHR056760 Cardamine hirsuta HOM05D003941 ORTHO05D009447 1.6e-17 94.0 213 34.7
Carub.0002s1065 Capsella rubella HOM05D003941 ORTHO05D009447 3.6e-17 92.8 211 35.1
BcaC03g14681 Brassica carinata HOM05D003941 ORTHO05D009447 8.0e-17 91.7 219 33.3
BolC2t08261H Brassica oleracea HOM05D003941 ORTHO05D009447 8.0e-17 91.7 219 33.3
Thhalv10019959m.g Eutrema salsugineum HOM05D003941 ORTHO05D009447 8.0e-17 91.7 223 30.9
AT1G65200 Arabidopsis thaliana HOM05D003941 ORTHO05D009447 1.4e-16 90.9 215 36.3
THA.LOC104821900 Tarenaya hassleriana HOM05D003941 ORTHO05D012174 1.8e-16 90.5 242 28.1
A02p41830 Brassica napus HOM05D003941 ORTHO05D009447 4.0e-16 89.4 149 40.9
Carub.0002s1066 Capsella rubella HOM05D003941 ORTHO05D009447 4.0e-16 89.4 214 36.4
AL2G20180 Arabidopsis lyrata HOM05D003941 ORTHO05D009447 5.2e-16 89.0 217 35.5
CARHR038520 Cardamine hirsuta HOM05D003941 ORTHO05D009447 5.2e-16 89.0 197 33.5
AL2G19840 Arabidopsis lyrata HOM05D003941 ORTHO05D009447 2.0e-15 87.0 206 35.0
BcaB05g24093 Brassica carinata HOM05D003941 ORTHO05D009447 2.0e-15 87.0 207 33.3
C02p21210 Brassica napus HOM05D003941 ORTHO05D009447 2.0e-15 87.0 222 32.0
BcaC05g30202 Brassica carinata HOM05D003941 ORTHO05D009447 9.8e-15 84.7 225 29.3
AL2G19870 Arabidopsis lyrata HOM05D003941 ORTHO05D009447 1.3e-14 84.3 237 26.6
AT1G65110 Arabidopsis thaliana HOM05D003941 ORTHO05D009447 1.4e-13 80.9 198 32.8
C02p61760 Brassica napus HOM05D003941 ORTHO05D009447 1.8e-13 80.5 158 38.0
BcaC03g14683 Brassica carinata HOM05D003941 ORTHO05D009447 2.4e-13 80.1 215 34.0
Aa31LG2G2340 Aethionema arabicum HOM05D003941 ORTHO05D009447 3.2e-13 79.7 230 28.7
AT1G65120 Arabidopsis thaliana HOM05D003941 ORTHO05D009447 5.4e-13 79.0 237 28.7
Carub.0002s1060 Capsella rubella HOM05D003941 ORTHO05D009447 5.4e-13 79.0 222 29.7
C05p62840 Brassica napus HOM05D003941 ORTHO05D009447 7.0e-13 78.6 222 29.3
BraA05t23053Z Brassica rapa HOM05D003941 ORTHO05D009447 7.0e-13 78.6 225 28.9
BcaB07g29810 Brassica carinata HOM05D003941 ORTHO05D009447 1.6e-12 77.4 220 30.9
C02p21230 Brassica napus HOM05D003941 ORTHO05D009447 1.6e-12 77.4 218 34.4
BolC2t08263H Brassica oleracea HOM05D003941 ORTHO05D009447 1.6e-12 77.4 218 34.4
BcaC05g29948 Brassica carinata HOM05D003941 ORTHO05D009447 2.0e-12 77.0 222 28.8
BolC5t34939H Brassica oleracea HOM05D003941 ORTHO05D009447 2.0e-12 77.0 222 28.8
A05p43100 Brassica napus HOM05D003941 ORTHO05D009447 2.7e-12 76.6 225 28.9
A05p43090 Brassica napus HOM05D003941 ORTHO05D009447 4.6e-12 75.9 226 28.3
Carub.0002s1057 Capsella rubella HOM05D003941 ORTHO05D009447 5.9e-12 75.5 175 34.9
A02p13090 Brassica napus HOM05D003941 ORTHO05D009447 1.7e-11 73.9 218 33.9
BraA02t06365Z Brassica rapa HOM05D003941 ORTHO05D009447 1.7e-11 73.9 218 33.9
BcaB05g24095 Brassica carinata HOM05D003941 ORTHO05D009447 2.3e-11 73.6 214 32.7
Aa31LG2G2310 Aethionema arabicum HOM05D003941 ORTHO05D009447 1.9e-10 70.5 206 31.6
BcaC05g30233 Brassica carinata HOM05D003941 ORTHO05D009447 8.0e-09 65.1 167 30.5


User provided reference genes

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