Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g29561 Brassica carinata HOM05D005118 ORTHO05D006038 3.2e-136 488.4 247 100.0
BolC5t33871H Brassica oleracea HOM05D005118 ORTHO05D006038 6.1e-111 404.4 281 79.0
Sp3g13570 Schrenkiella parvula HOM05D005118 ORTHO05D006038 6.1e-103 377.9 278 73.4
Thhalv10021266m.g Eutrema salsugineum HOM05D005118 ORTHO05D006038 7.7e-98 360.9 285 69.1
C05p51840 Brassica napus HOM05D005118 ORTHO05D006038 2.1e-95 352.8 281 71.5
BcaC05g28982 Brassica carinata HOM05D005118 ORTHO05D006038 1.4e-83 313.5 213 80.3
CARHR145210 Cardamine hirsuta HOM05D005118 ORTHO05D006038 9.5e-80 300.8 290 60.7
Carub.0005s0168 Capsella rubella HOM05D005118 ORTHO05D006038 1.4e-78 297.0 278 60.8
BraA05t22581Z Brassica rapa HOM05D005118 ORTHO05D006038 4.4e-77 292.0 284 59.2
Sp3g09700 Schrenkiella parvula HOM05D005118 ORTHO05D006038 7.5e-77 291.2 292 57.2
A05p37870 Brassica napus HOM05D005118 ORTHO05D006038 9.8e-77 290.8 287 58.5
Thhalv10018973m.g Eutrema salsugineum HOM05D005118 ORTHO05D006038 3.7e-76 288.9 273 60.4
AL3G23010 Arabidopsis lyrata HOM05D005118 ORTHO05D006038 4.6e-74 282.0 290 57.6
BcaB06g25621 Brassica carinata HOM05D005118 ORTHO05D006038 4.6e-74 282.0 277 58.5
C05p56660 Brassica napus HOM05D005118 ORTHO05D006038 3.9e-73 278.9 284 56.0
BolC5t34331H Brassica oleracea HOM05D005118 ORTHO05D006038 3.9e-73 278.9 284 56.0
BraA05t22230Z Brassica rapa HOM05D005118 ORTHO05D006038 8.0e-71 271.2 193 76.7
AT3G11470 Arabidopsis thaliana HOM05D005118 ORTHO05D006038 5.8e-69 265.0 264 57.2
Aa31LG3G4830 Aethionema arabicum HOM05D005118 ORTHO05D006038 9.8e-69 264.2 277 54.2
Aa31LG3G4790 Aethionema arabicum HOM05D005118 ORTHO05D006038 7.0e-67 258.1 288 52.1
BcaC05g29371 Brassica carinata HOM05D005118 ORTHO05D006038 1.1e-64 250.8 284 53.2
Prupe.7G104300 Prunus persica HOM05D005118 ORTHO05D006038 5.6e-64 248.4 292 49.7
MD12G1027200 Malus domestica HOM05D005118 ORTHO05D006038 7.3e-64 248.1 291 49.8
THA.LOC104816589 Tarenaya hassleriana HOM05D005118 ORTHO05D006038 4.7e-63 245.4 264 53.8
AT2G02765 Arabidopsis thaliana HOM05D005118 ORTHO05D006038 9.8e-61 237.7 221 59.7
Atru.chr8.1769 Acer truncatum HOM05D005118 ORTHO05D006038 3.7e-60 235.7 296 46.3
DCAR_013399 Daucus carota HOM05D005118 ORTHO05D006038 1.4e-59 233.8 301 45.8
CiPaw.09G015400 Carya illinoinensis HOM05D005118 ORTHO05D006038 1.2e-58 230.7 292 47.9
COL.COLO4_29702 Corchorus olitorius HOM05D005118 ORTHO05D006038 3.5e-58 229.2 292 48.3
Ciclev10011946m.g Citrus clementina HOM05D005118 ORTHO05D006038 1.7e-57 226.9 318 43.4
HanXRQChr08g0212801 Helianthus annuus HOM05D005118 ORTHO05D006038 3.9e-57 225.7 280 47.9
Rhsim03G0072700 Rhododendron simsii HOM05D005118 ORTHO05D006038 3.9e-57 225.7 294 45.6
Oeu056875.2 Olea europaea HOM05D005118 ORTHO05D006038 5.1e-57 225.3 290 45.2
FAN05G3536 Fragaria x ananassa HOM05D005118 ORTHO05D006038 6.6e-57 224.9 288 45.8
QL05p009399 Quercus lobata HOM05D005118 ORTHO05D006038 6.6e-57 224.9 308 43.2
RcHm_v2.0_Chr3g0474251 Rosa chinensis HOM05D005118 ORTHO05D006038 6.6e-57 224.9 290 46.2
FvH4_6g19140 Fragaria vesca HOM05D005118 ORTHO05D006038 8.6e-57 224.6 288 46.5
FAN02G2546 Fragaria x ananassa HOM05D005118 ORTHO05D006038 8.6e-57 224.6 288 45.1
Gohir.D01G195000 Gossypium hirsutum HOM05D005118 ORTHO05D006038 8.6e-57 224.6 294 45.9
Sabra06G0162900 Salix brachista HOM05D005118 ORTHO05D006038 8.6e-57 224.6 291 45.0
Thecc.05G091100 Theobroma cacao HOM05D005118 ORTHO05D006038 8.6e-57 224.6 294 47.3
CsaV3_6G003860 Cucumis sativus L. HOM05D005118 ORTHO05D006038 1.1e-56 224.2 291 44.0
Migut.J01020 Erythranthe guttata HOM05D005118 ORTHO05D006038 1.5e-56 223.8 284 45.4
FAN14G1754 Fragaria x ananassa HOM05D005118 ORTHO05D006038 1.9e-56 223.4 289 46.7
FAN09G1525 Fragaria x ananassa HOM05D005118 ORTHO05D006038 2.5e-56 223.0 288 45.1
Gorai.002G239100 Gossypium raimondii HOM05D005118 ORTHO05D006038 2.5e-56 223.0 294 45.6
MELO3C011647.2 Cucumis melo HOM05D005118 ORTHO05D006038 5.6e-56 221.9 291 44.0
Gohir.A01G205500 Gossypium hirsutum HOM05D005118 ORTHO05D006038 5.6e-56 221.9 294 45.2
TPR.G2549 Trifolium pratense HOM05D005118 ORTHO05D006038 5.6e-56 221.9 291 46.0
GSVIVG01016776001 Vitis vinifera HOM05D005118 ORTHO05D006038 7.3e-56 221.5 294 45.2
Lalb_Chr10g0096391 Lupinus albus HOM05D005118 ORTHO05D006038 1.2e-55 220.7 293 44.7
Atru.chr8.1478 Acer truncatum HOM05D005118 ORTHO05D006038 2.8e-55 219.5 290 45.5
Eucgr.A02654 Eucalyptus grandis HOM05D005118 ORTHO05D006038 4.7e-55 218.8 292 43.5
Sed0011362 Sechium edule HOM05D005118 ORTHO05D006038 4.7e-55 218.8 294 43.2
Phvul.007G152100 Phaseolus vulgaris HOM05D005118 ORTHO05D006038 8.1e-55 218.0 280 45.0
TAR365G0960 Trochodendron aralioides HOM05D005118 ORTHO05D006038 1.4e-54 217.2 293 46.4
Psat6g079520 Pisum sativum HOM05D005118 ORTHO05D006038 2.3e-54 216.5 292 45.5
TWI77G0553 Tripterygium wilfordii HOM05D005118 ORTHO05D006038 3.1e-54 216.1 299 43.5
SalBow3G3316 Salvia bowleyana HOM05D005118 ORTHO05D006038 4.0e-54 215.7 292 43.2
CANSAT64G1535 Cannabis sativa HOM05D005118 ORTHO05D006038 5.2e-54 215.3 290 45.5
ClCG08G004490 Citrullus lanatus HOM05D005118 ORTHO05D006038 5.2e-54 215.3 293 44.0
Glyma.13G154600 Glycine max HOM05D005118 ORTHO05D006038 6.8e-54 214.9 295 43.7
ECA247G3083 Erigeron canadensis HOM05D005118 ORTHO05D006038 3.4e-53 212.6 281 45.2
Lj5g0005733 Lotus japonicus HOM05D005118 ORTHO05D006038 3.4e-53 212.6 295 43.1
PSO063G5626 Papaver somniferum HOM05D005118 ORTHO05D006038 3.4e-53 212.6 293 45.4
Lsat_1_v5_gn_9_20681 Lactuca sativa HOM05D005118 ORTHO05D006038 4.4e-53 212.2 269 46.1
arahy.Tifrunner.gnm1.ann1.72V09J Arachis hypogaea HOM05D005118 ORTHO05D006038 7.6e-53 211.5 292 43.2
arahy.Tifrunner.gnm1.ann1.W1QNQS Arachis hypogaea HOM05D005118 ORTHO05D006038 7.6e-53 211.5 292 43.2
Medtr8g095460 Medicago truncatula HOM05D005118 ORTHO05D006038 7.6e-53 211.5 292 44.9
PSO782G2273 Papaver somniferum HOM05D005118 ORTHO05D006038 7.6e-53 211.5 293 44.7
Sc02g0000340 Simmondsia chinensis HOM05D005118 ORTHO05D006038 7.6e-53 211.5 280 45.7
Nn2g14484 Nelumbo nucifera HOM05D005118 ORTHO05D006038 1.3e-52 210.7 293 43.3
Peaxi162Scf00102g00213 Petunia axillaris HOM05D005118 ORTHO05D006038 1.3e-52 210.7 299 41.8
AUR62006198 Chenopodium quinoa HOM05D005118 ORTHO05D006038 1.7e-52 210.3 284 43.7
PGR004G0063 Punica granatum HOM05D005118 ORTHO05D006038 1.7e-52 210.3 262 46.6
Medtr1g059790 Medicago truncatula HOM05D005118 ORTHO05D006038 2.2e-52 209.9 290 44.5
Hund01804 Selenicereus undatus HOM05D005118 ORTHO05D006038 3.7e-52 209.1 258 48.4
Ca_00895_v3 Cicer arietinum L. HOM05D005118 ORTHO05D006038 8.4e-52 208.0 292 42.1
Lj6g0000791 Lotus japonicus HOM05D005118 ORTHO05D006038 8.4e-52 208.0 295 42.4
Lj6g0018590 Lotus japonicus HOM05D005118 ORTHO05D006038 8.4e-52 208.0 295 42.4
MBI14_g17373_MAGBIO Magnolia biondii HOM05D005118 ORTHO05D006038 1.4e-51 207.2 291 43.6
EL10Ac7g16902 Beta vulgaris HOM05D001354 ORTHO05D007486 1.9e-51 206.8 288 44.8
Oeu017686.1 Olea europaea HOM05D005118 ORTHO05D006038 4.1e-51 205.7 295 43.4
VMungo1309G0892 Vigna mungo HOM05D005118 ORTHO05D006038 4.1e-51 205.7 293 41.6
Sopen09g004710 Solanum pennellii HOM05D005118 ORTHO05D006038 7.1e-51 204.9 295 41.0
Solyc09g009960.3 Solanum lycopersicum HOM05D005118 ORTHO05D006038 9.2e-51 204.5 295 41.0
CSS0000835 Camellia sinensis var. sinensis HOM05D005118 ORTHO05D006038 1.2e-50 204.1 282 44.3
Aqoxy3G03420 Aquilegia oxysepala HOM05D005118 ORTHO05D006038 2.1e-50 203.4 295 42.0
CAN.G397.66 Capsicum annuum HOM05D005118 ORTHO05D006038 2.1e-50 203.4 299 40.5
Rhsim03G0074200 Rhododendron simsii HOM05D005118 ORTHO05D006038 2.7e-50 203.0 281 44.1
Ah.08g210500 Amaranthus hybridus HOM05D000892 ORTHO05D009371 1.0e-49 201.1 258 45.7
Potri.006G211300 Populus trichocarpa HOM05D005118 ORTHO05D006038 6.6e-49 198.4 203 51.2
TWI53G1403 Tripterygium wilfordii HOM05D005118 ORTHO05D006038 6.6e-49 198.4 282 41.5
Nitab4.5_0001933g0040 Nicotiana tabacum HOM05D005118 ORTHO05D006038 1.1e-48 197.6 302 41.4
HPP92_018124 Vanilla planifolia HOM05D005118 ORTHO05D006038 4.3e-48 195.7 287 42.9
unitig_748.g8118 Utricularia gibba HOM05D005118 ORTHO05D006038 5.6e-48 195.3 285 40.4
Zm00001eb000710 Zea mays HOM05D005118 ORTHO05D006038 1.4e-46 190.7 285 40.7
vmacro07419 Vaccinium macrocarpon HOM05D005118 ORTHO05D006038 2.4e-46 189.9 333 38.1
Sabra16G0082800 Salix brachista HOM05D005118 ORTHO05D006038 2.0e-45 186.8 333 38.1
AUR62037021 Chenopodium quinoa HOM05D005118 ORTHO05D006038 3.4e-45 186.0 246 43.5
Dinv21195 Davidia involucrata HOM05D005118 ORTHO05D006038 1.7e-44 183.7 239 45.2
ATR0618G287 Amborella trichopoda HOM05D005118 ORTHO05D006038 8.4e-44 181.4 269 42.0
AL5G11970 Arabidopsis lyrata HOM05D005118 ORTHO05D006038 2.4e-43 179.9 180 55.0
Os08g0243100 Oryza sativa ssp. japonica HOM05D005118 ORTHO05D006038 9.3e-43 177.9 278 39.2
AUR62017509 Chenopodium quinoa HOM05D005118 ORTHO05D006038 3.0e-41 172.9 270 40.4
Lj6g0005905 Lotus japonicus HOM05D005118 ORTHO05D006038 2.5e-40 169.9 295 39.0
Rhsim03G0072000 Rhododendron simsii HOM05D005118 ORTHO05D006038 2.5e-40 169.9 234 41.0
Peaxi162Scf00096g00416 Petunia axillaris HOM05D005118 ORTHO05D006038 1.3e-39 167.5 262 39.3
Duzib093G2169 Durio zibethinus HOM05D005118 ORTHO05D006038 2.2e-36 156.8 211 45.0
A05p34090 Brassica napus HOM05D005118 ORTHO05D006038 2.7e-34 149.8 154 59.7
SEGI_18237 Sequoiadendron giganteum HOM05D005118 ORTHO05D006038 6.0e-34 148.7 309 34.0
HPP92_018147 Vanilla planifolia HOM05D005118 ORTHO05D006038 1.0e-33 147.9 172 47.7
Sabra06G0126100 Salix brachista HOM05D005118 ORTHO05D006038 3.0e-33 146.4 170 48.2
SMO144G0078 Selaginella moellendorffii HOM05D005118 ORTHO05D006038 3.9e-33 146.0 276 34.4
Cc06_g05990 Coffea canephora HOM05D005118 ORTHO05D006038 8.7e-33 144.8 214 43.0
Nitab4.5_0012129g0010 Nicotiana tabacum HOM05D005118 ORTHO05D006038 8.7e-33 144.8 291 36.1
Manes.08G026600 Manihot esculenta HOM05D005118 ORTHO05D006038 1.1e-32 144.4 265 41.1
Lj2C139G10 Lonicera japonica HOM05D005118 ORTHO05D006038 4.3e-32 142.5 211 41.7
Potri.016G078400 Populus trichocarpa HOM05D005118 ORTHO05D006038 5.3e-30 135.6 145 46.9
SMO118G0036 Selaginella moellendorffii HOM05D005118 ORTHO05D006038 5.3e-30 135.6 270 34.4
SGA_v2.0_scaffold31G12903 Striga asiatica HOM05D005118 ORTHO05D006038 9.0e-30 134.8 219 39.7
Cpa.g.sc5.3 Carica papaya HOM05D005118 ORTHO05D006038 2.6e-29 133.3 165 47.9
VMungo0720G2492 Vigna mungo HOM05D005118 ORTHO05D006038 1.9e-27 127.1 167 41.3
Mapoly0006s0252 Marchantia polymorpha HOM05D005118 ORTHO05D006038 5.5e-27 125.6 313 31.3
Pp3c5_18920 Physcomitrium patens HOM05D005118 ORTHO05D006038 1.2e-26 124.4 195 39.5
Dinv21192 Davidia involucrata HOM05D005118 ORTHO05D006038 1.6e-26 124.0 229 37.1
Haze_12101 Corylus avellana HOM05D005118 ORTHO05D006038 2.7e-26 123.2 204 37.7
AagrBONN_evm.TU.Sc2ySwM_340.158 Anthoceros agrestis HOM05D005118 ORTHO05D006038 8.7e-25 118.2 302 30.8
CARHR086010 Cardamine hirsuta HOM05D005118 ORTHO05D006038 3.5e-18 96.3 126 50.8
VMungo0720G0644 Vigna mungo HOM05D005118 ORTHO05D006038 5.1e-17 92.4 95 51.6
PGSC0003DMG402008870 Solanum tuberosum HOM05D005118 ORTHO05D006038 9.6e-16 88.2 137 38.7
Carub.0003s1079 Capsella rubella HOM05D005118 ORTHO05D006038 8.2e-15 85.1 101 53.5
Glyma.10G074300 Glycine max HOM05D005118 ORTHO05D006038 3.1e-14 83.2 120 43.3
MD14G1027400 Malus domestica HOM05D005118 ORTHO05D006038 1.2e-13 81.3 149 37.6
FvH4_4g11630 Fragaria vesca HOM05D005118 ORTHO05D006038 5.9e-13 79.0 103 41.7
PRCOL_00003909 Prasinoderma coloniale HOM05D005118 ORTHO05D006038 5.9e-13 79.0 215 30.7
CBR_g30340 Chara braunii HOM05D005118 ORTHO05D006038 7.6e-13 78.6 196 32.7
FAN12G1659 Fragaria x ananassa HOM05D005118 ORTHO05D006038 6.5e-12 75.5 103 40.8
Ah.16g107780 Amaranthus hybridus HOM05D005118 ORTHO05D006038 1.6e-10 70.9 73 54.8
TPR.G14778 Trifolium pratense HOM05D005118 ORTHO05D006038 1.0e-09 68.2 157 33.1
AUR62015050 Chenopodium quinoa HOM05D005118 ORTHO05D006038 1.8e-09 67.4 61 55.7
CDE02G4411 Ceratophyllum demersum HOM05D000588 ORTHO05D000637 5.1e-09 65.9 107 41.1
MCO02G431 Micromonas commoda HOM05D005118 ORTHO05D006038 5.1e-09 65.9 80 41.2
Hund15021 Selenicereus undatus HOM05D005118 ORTHO05D006038 5.7e-08 62.4 59 49.2
SEGI_32763 Sequoiadendron giganteum HOM05D005118 ORTHO05D006038 2.2e-07 60.5 103 36.9
Cre01.g018500 Chlamydomonas reinhardtii HOM05D005118 ORTHO05D006038 6.3e-07 58.9 74 44.6
BcaB06g25617 Brassica carinata HOM05D005118 ORTHO05D006038 8.2e-07 58.5 48 66.7
BcaB06g25618 Brassica carinata HOM05D005118 ORTHO05D006038 8.2e-07 58.5 48 66.7
Lj2E139T0 Lonicera japonica HOM05D005118 ORTHO05D006038 3.1e-06 56.6 45 57.8


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