Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g29554 Brassica carinata HOM05D000549 ORTHO05D008973 6.4e-34 146.7 69 100.0
BcaC05g28998 Brassica carinata HOM05D000549 ORTHO05D008973 6.4e-34 146.7 69 100.0
BcaC05g28999 Brassica carinata HOM05D000549 ORTHO05D008973 2.7e-32 141.4 69 95.7
C05p51940 Brassica napus HOM05D000549 ORTHO05D008973 2.7e-32 141.4 69 95.7
BolC5t33880H Brassica oleracea HOM05D000549 ORTHO05D008973 2.7e-32 141.4 69 95.7
CARHR090270 Cardamine hirsuta HOM05D000549 ORTHO05D008973 7.8e-32 139.8 69 94.2
A05p34190 Brassica napus HOM05D000549 ORTHO05D008973 4.3e-30 134.0 69 91.3
BraA05t22239Z Brassica rapa HOM05D000549 ORTHO05D008973 4.3e-30 134.0 69 91.3
Aa31LG8G2470 Aethionema arabicum HOM05D000549 ORTHO05D008973 2.8e-29 131.3 69 89.9
AL3G27680 Arabidopsis lyrata HOM05D000549 ORTHO05D008973 4.7e-29 130.6 69 88.4
Carub.0003s1494 Capsella rubella HOM05D000549 ORTHO05D008973 6.2e-29 130.2 69 88.4
Thhalv10021099m.g Eutrema salsugineum HOM05D000549 ORTHO05D008973 2.3e-28 128.3 72 84.7
CiPaw.11G171000 Carya illinoinensis HOM05D000549 ORTHO05D008973 6.8e-28 126.7 71 85.9
AT3G15290 Arabidopsis thaliana HOM05D000549 ORTHO05D008973 2.0e-27 125.2 69 85.5
Haze_09443 Corylus avellana HOM05D000549 ORTHO05D008973 3.4e-27 124.4 71 84.5
Sp3g13490 Schrenkiella parvula HOM05D000549 ORTHO05D008973 3.4e-27 124.4 72 83.3
Atru.chr2.2437 Acer truncatum HOM05D000549 ORTHO05D008973 5.8e-27 123.6 71 84.5
Duzib268G0752 Durio zibethinus HOM05D000549 ORTHO05D008973 7.6e-27 123.2 71 83.1
FvH4_3g19690 Fragaria vesca HOM05D000549 ORTHO05D008973 2.9e-26 121.3 71 81.7
FAN11G2623 Fragaria x ananassa HOM05D000549 ORTHO05D008973 2.9e-26 121.3 71 81.7
Manes.03G107000 Manihot esculenta HOM05D000549 ORTHO05D008973 3.8e-26 120.9 71 83.1
Ciclev10009049m.g Citrus clementina HOM05D000549 ORTHO05D008973 6.4e-26 120.2 71 81.7
MELO3C019405.2 Cucumis melo HOM05D000549 ORTHO05D008973 8.4e-26 119.8 62 87.1
Eucgr.F03304 Eucalyptus grandis HOM05D000549 ORTHO05D008973 8.4e-26 119.8 71 83.1
ClCG05G009290 Citrullus lanatus HOM05D000549 ORTHO05D008973 1.1e-25 119.4 61 90.2
TAR624G0845 Trochodendron aralioides HOM05D000549 ORTHO05D008973 1.4e-25 119.0 71 83.1
RcHm_v2.0_Chr5g0032991 Rosa chinensis HOM05D000549 ORTHO05D008973 1.9e-25 118.6 71 81.7
TWI38G0085 Tripterygium wilfordii HOM05D000549 ORTHO05D008973 1.9e-25 118.6 71 78.9
FAN25G1998 Fragaria x ananassa HOM05D000549 ORTHO05D008973 2.4e-25 118.2 71 80.3
MD11G1251600 Malus domestica HOM05D000549 ORTHO05D008973 3.2e-25 117.9 71 77.5
Psat4g174480 Pisum sativum HOM05D000549 ORTHO05D008973 3.2e-25 117.9 61 88.5
THA.LOC104818085 Tarenaya hassleriana HOM05D000549 ORTHO05D008973 3.2e-25 117.9 69 78.3
TPR.G36705 Trifolium pratense HOM05D000549 ORTHO05D008973 3.2e-25 117.9 61 88.5
CSS0030990 Camellia sinensis var. sinensis HOM05D000549 ORTHO05D008973 4.1e-25 117.5 71 80.3
Lsat_1_v5_gn_5_128041 Lactuca sativa HOM05D000549 ORTHO05D008973 4.1e-25 117.5 65 81.5
Nn1g04151 Nelumbo nucifera HOM05D000549 ORTHO05D008973 4.1e-25 117.5 71 78.9
QL08p022331 Quercus lobata HOM05D000549 ORTHO05D008973 4.1e-25 117.5 68 83.8
Cc05_g11870 Coffea canephora HOM05D000549 ORTHO05D008973 5.4e-25 117.1 66 81.8
Gohir.D01G048800 Gossypium hirsutum HOM05D000549 ORTHO05D008973 7.1e-25 116.7 71 78.9
Gorai.002G068600 Gossypium raimondii HOM05D000549 ORTHO05D008973 7.1e-25 116.7 71 78.9
Ca_23049_v3 Cicer arietinum L. HOM05D000549 ORTHO05D008973 9.2e-25 116.3 71 78.9
Gohir.A01G062201 Gossypium hirsutum HOM05D000549 ORTHO05D008973 9.2e-25 116.3 71 78.9
Nitab4.5_0001241g0110 Nicotiana tabacum HOM05D000549 ORTHO05D008973 9.2e-25 116.3 71 80.3
Sed0018147 Sechium edule HOM05D000549 ORTHO05D008973 9.2e-25 116.3 59 89.8
Lalb_Chr03g0030701 Lupinus albus HOM05D000549 ORTHO05D008973 1.2e-24 115.9 61 86.9
Actinidia09693 Actinidia chinensis HOM05D000549 ORTHO05D008973 1.6e-24 115.5 60 86.7
arahy.Tifrunner.gnm1.ann1.QP3SM1 Arachis hypogaea HOM05D000549 ORTHO05D008973 1.6e-24 115.5 59 89.8
Hund22858 Selenicereus undatus HOM05D000549 ORTHO05D008973 1.6e-24 115.5 63 82.5
Thecc.07G094500 Theobroma cacao HOM05D000549 ORTHO05D008973 1.6e-24 115.5 71 78.9
Ah.04g164750 Amaranthus hybridus HOM05D000549 ORTHO05D008973 2.1e-24 115.2 67 79.1
Lj8A154T80 Lonicera japonica HOM05D000549 ORTHO05D008973 2.1e-24 115.2 66 80.3
Peaxi162Scf00069g01626 Petunia axillaris HOM05D000549 ORTHO05D008973 2.1e-24 115.2 71 80.3
Prupe.4G177500 Prunus persica HOM05D000549 ORTHO05D008973 2.1e-24 115.2 71 77.5
Solyc07g063010.3 Solanum lycopersicum HOM05D000549 ORTHO05D008973 2.1e-24 115.2 71 80.3
Hma1.2p1_0387F.1_g142000 Hydrangea macrophylla HOM05D000549 ORTHO05D008973 2.7e-24 114.8 71 80.3
Sabra16G0261300 Salix brachista HOM05D000549 ORTHO05D008973 2.7e-24 114.8 70 82.9
Sc16g0007090 Simmondsia chinensis HOM05D000549 ORTHO05D008973 2.7e-24 114.8 63 84.1
Glyma.06G254700 Glycine max HOM05D000549 ORTHO05D008973 3.5e-24 114.4 61 85.2
Lj3g0011104 Lotus japonicus HOM05D000549 ORTHO05D008973 3.5e-24 114.4 59 89.8
Phvul.011G160900 Phaseolus vulgaris HOM05D000549 ORTHO05D008973 3.5e-24 114.4 61 83.6
PGR031G0697 Punica granatum HOM05D000549 ORTHO05D008973 3.5e-24 114.4 71 76.1
arahy.Tifrunner.gnm1.ann1.KD7CXP Arachis hypogaea HOM05D000549 ORTHO05D008973 4.6e-24 114.0 59 88.1
Medtr8g058775 Medicago truncatula HOM05D000549 ORTHO05D008973 4.6e-24 114.0 60 86.7
Medtr8g061230 Medicago truncatula HOM05D000549 ORTHO05D008973 4.6e-24 114.0 60 86.7
ATR0150G011 Amborella trichopoda HOM05D000549 ORTHO05D008973 6.0e-24 113.6 71 74.6
CANSAT56G3843 Cannabis sativa HOM05D000549 ORTHO05D008973 6.0e-24 113.6 68 79.4
HanXRQChr10g0302691 Helianthus annuus HOM05D000549 ORTHO05D008973 6.0e-24 113.6 61 85.2
CSS0012700 Camellia sinensis var. sinensis HOM05D000549 ORTHO05D008973 7.8e-24 113.2 58 87.9
Oeu019309.1 Olea europaea HOM05D000549 ORTHO05D008973 7.8e-24 113.2 71 77.5
Os01g0796400 Oryza sativa ssp. japonica HOM05D000549 ORTHO05D008973 7.8e-24 113.2 67 74.6
PGSC0003DMG400012409 Solanum tuberosum HOM05D000549 ORTHO05D008973 7.8e-24 113.2 71 78.9
Nitab4.5_0001148g0050 Nicotiana tabacum HOM05D000549 ORTHO05D008973 1.0e-23 112.8 71 78.9
Potri.001G398600 Populus trichocarpa HOM05D000549 ORTHO05D008973 1.0e-23 112.8 70 81.4
Sopen07g031200 Solanum pennellii HOM05D000549 ORTHO05D008973 1.0e-23 112.8 71 78.9
Zm00001eb369580 Zea mays HOM05D000549 ORTHO05D008973 1.0e-23 112.8 67 73.1
Dinv20187 Davidia involucrata HOM05D000549 ORTHO05D008973 1.3e-23 112.5 61 83.6
Rhsim06G0201000 Rhododendron simsii HOM05D000549 ORTHO05D008973 1.3e-23 112.5 71 77.5
DCAR_013114 Daucus carota HOM05D000549 ORTHO05D008973 1.7e-23 112.1 72 79.2
HPP92_015987 Vanilla planifolia HOM05D000549 ORTHO05D008973 1.7e-23 112.1 60 81.7
CAN.G162.46 Capsicum annuum HOM05D000549 ORTHO05D008973 2.3e-23 111.7 58 87.9
GSVIVG01014304001 Vitis vinifera HOM05D000549 ORTHO05D008973 2.3e-23 111.7 59 86.4
vmacro11880 Vaccinium macrocarpon HOM05D000549 ORTHO05D008973 3.0e-23 111.3 61 80.3
Rhsim06G0200700 Rhododendron simsii HOM05D000549 ORTHO05D008973 3.9e-23 110.9 71 76.1
Aqoxy1G02369 Aquilegia oxysepala HOM05D000549 ORTHO05D008973 8.6e-23 109.8 59 86.4
AUR62019444 Chenopodium quinoa HOM05D000549 ORTHO05D008973 8.6e-23 109.8 58 84.5
PSO541G5386 Papaver somniferum HOM05D000549 ORTHO05D008973 8.6e-23 109.8 71 77.5
Cpa.g.sc80.84 Carica papaya HOM05D000549 ORTHO05D008973 2.5e-22 108.2 71 76.1
AUR62039187 Chenopodium quinoa HOM05D000549 ORTHO05D008973 3.3e-22 107.8 58 82.8
EL10Ac4g08211 Beta vulgaris HOM05D000549 ORTHO05D008973 4.3e-22 107.5 61 82.0
unitig_37.g12570 Utricularia gibba HOM05D000223 ORTHO05D008973 4.3e-22 107.5 59 84.7
MSTRG.6826 Avicennia marina HOM05D000549 ORTHO05D008973 7.3e-22 106.7 59 81.4
SalBow6G2784 Salvia bowleyana HOM05D000549 ORTHO05D008973 1.2e-21 105.9 59 81.4
Migut.M00789 Erythranthe guttata HOM05D000549 ORTHO05D008973 4.7e-21 104.0 59 83.1
Pp3c22_7880 Physcomitrium patens HOM05D000549 ORTHO05D008973 1.2e-19 99.4 57 80.7
VMungo1127G0883 Vigna mungo HOM05D000549 ORTHO05D008973 1.2e-19 99.4 52 86.5
CDE11G0549 Ceratophyllum demersum HOM05D000698 ORTHO05D008973 2.6e-19 98.2 58 75.9
SMO119G0356 Selaginella moellendorffii HOM05D000549 ORTHO05D008973 5.8e-19 97.1 60 76.7
Mapoly0058s0041 Marchantia polymorpha HOM05D000549 ORTHO05D008973 9.9e-19 96.3 58 75.9
ECA234G0847 Erigeron canadensis HOM05D000223 ORTHO05D008973 1.3e-18 95.9 51 86.3
PRCOL_00005281 Prasinoderma coloniale HOM05D000549 ORTHO05D008973 2.2e-18 95.1 57 75.4
AagrBONN_evm.TU.Sc2ySwM_228.2146 Anthoceros agrestis HOM05D000549 ORTHO05D008973 4.6e-16 87.4 59 69.5
SGA_v2.0_scaffold73G24251 Striga asiatica HOM05D000549 ORTHO05D008973 1.0e-15 86.3 59 72.9
Cre12.g534350 Chlamydomonas reinhardtii HOM05D000549 ORTHO05D008973 5.1e-15 84.0 57 64.9
Cfa026286 Carpinus fangiana HOM05D000549 ORTHO05D008973 3.3e-14 81.3 57 66.7
TAR626G0277 Trochodendron aralioides HOM05D000549 ORTHO05D008973 5.1e-07 57.4 30 86.7
HPP92_015985 Vanilla planifolia HOM05D000549 ORTHO05D431002 1.9e-06 55.5 28 85.7


User provided reference genes

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