Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g29552 Brassica carinata HOM05D010894 ORTHO05D011541 9.8e-75 283.5 155 100.0
A05p34200 Brassica napus HOM05D010894 ORTHO05D011541 2.8e-61 238.8 155 87.1
BraA05t22240Z Brassica rapa HOM05D010894 ORTHO05D011541 2.8e-61 238.8 155 87.1
Sp3g13480 Schrenkiella parvula HOM05D010894 ORTHO05D011541 6.2e-61 237.7 164 78.7
Thhalv10022204m.g Eutrema salsugineum HOM05D010894 ORTHO05D011541 3.1e-60 235.3 162 77.8
BcaC05g29000 Brassica carinata HOM05D010894 ORTHO05D011541 8.3e-58 227.3 155 84.5
BolC5t33881H Brassica oleracea HOM05D010894 ORTHO05D011541 8.3e-58 227.3 155 84.5
C05p51950 Brassica napus HOM05D010894 ORTHO05D011541 1.9e-57 226.1 155 84.5
CARHR090260 Cardamine hirsuta HOM05D010894 ORTHO05D011541 5.4e-49 198.0 155 71.0
Carub.0003s1493 Capsella rubella HOM05D010894 ORTHO05D011541 1.2e-48 196.8 162 72.2
Aa31LG8G2460 Aethionema arabicum HOM05D010894 ORTHO05D011541 8.4e-42 174.1 166 60.2
AL3G27670 Arabidopsis lyrata HOM05D010894 ORTHO05D011541 4.2e-41 171.8 155 67.7
AT3G15280 Arabidopsis thaliana HOM05D010894 ORTHO05D011541 2.5e-38 162.5 155 64.5
BolC1t04890H Brassica oleracea HOM05D010894 ORTHO05D011541 2.8e-29 132.5 117 65.0
BcaC09g48483 Brassica carinata HOM05D010894 ORTHO05D011541 1.1e-28 130.6 117 64.1
A01p38600 Brassica napus HOM05D010894 ORTHO05D011541 1.5e-27 126.7 158 52.5
BraA01t03924Z Brassica rapa HOM05D010894 ORTHO05D011541 1.5e-27 126.7 158 52.5
BcaB04g20939 Brassica carinata HOM05D010894 ORTHO05D011541 5.5e-17 91.7 56 85.7
C01p49310 Brassica napus HOM05D010894 ORTHO05D011541 5.1e-15 85.1 81 60.5
Duzib170G0283 Durio zibethinus HOM05D013412 ORTHO05D011541 9.4e-09 64.3 111 36.9
Ciclev10010374m.g Citrus clementina HOM05D013412 ORTHO05D011541 3.6e-08 62.4 105 37.1
Gorai.002G068400 Gossypium raimondii HOM05D013412 ORTHO05D011541 7.9e-08 61.2 90 38.9
Gohir.D01G048600 Gossypium hirsutum HOM05D013412 ORTHO05D011541 2.3e-07 59.7 90 37.8
Gohir.1Z049548 Gossypium hirsutum HOM05D013412 ORTHO05D011541 5.1e-07 58.5 88 37.5
Gohir.A01G062000 Gossypium hirsutum HOM05D013412 ORTHO05D011541 5.1e-07 58.5 88 37.5
Duzib213G0592 Durio zibethinus HOM05D013412 ORTHO05D011541 8.8e-07 57.8 98 35.7


User provided reference genes

Program Settings