Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g29501 Brassica carinata HOM05D007076 ORTHO05D008800 3.2e-131 471.9 255 100.0
BraA04t18948Z Brassica rapa HOM05D007076 ORTHO05D008800 4.8e-119 431.4 255 84.3
A04p35120 Brassica napus HOM05D007076 ORTHO05D008800 1.4e-118 429.9 255 83.9
BcaC02g06997 Brassica carinata HOM05D007076 ORTHO05D008800 1.3e-116 423.3 256 83.2
BolC4t28783H Brassica oleracea HOM05D007076 ORTHO05D008800 2.1e-114 416.0 257 82.5
Sp4g29830 Schrenkiella parvula HOM05D007076 ORTHO05D008800 4.1e-110 401.7 255 79.6
Carub.0004s3063 Capsella rubella HOM05D007076 ORTHO05D008800 5.1e-105 384.8 247 78.9
CARHR143300 Cardamine hirsuta HOM05D007076 ORTHO05D008800 4.8e-103 378.3 247 76.5
AL4G47500 Arabidopsis lyrata HOM05D007076 ORTHO05D008800 8.2e-103 377.5 246 78.9
Thhalv10001598m.g Eutrema salsugineum HOM05D007076 ORTHO05D008800 1.2e-101 373.6 247 74.9
Aa31LG1G29340 Aethionema arabicum HOM05D007076 ORTHO05D008800 6.7e-97 357.8 193 85.5
C04p73020 Brassica napus HOM05D007076 ORTHO05D008800 2.0e-93 346.3 180 92.8
GSVIVG01012872001 Vitis vinifera HOM05D007076 ORTHO05D008800 7.7e-93 344.4 200 79.5
CANSAT11G0571 Cannabis sativa HOM05D007076 ORTHO05D008800 1.7e-92 343.2 195 80.0
FAN26G2288 Fragaria x ananassa HOM05D007076 ORTHO05D008800 3.8e-92 342.0 195 80.5
FAN23G1541 Fragaria x ananassa HOM05D007076 ORTHO05D008800 6.5e-92 341.3 195 80.5
Duzib168G1701 Durio zibethinus HOM05D007076 ORTHO05D008800 2.5e-91 339.3 195 77.9
AT2G47910 Arabidopsis thaliana HOM05D007076 ORTHO05D008800 3.2e-91 339.0 178 90.4
FvH4_1g01870 Fragaria vesca HOM05D007076 ORTHO05D008800 4.2e-91 338.6 195 79.5
FAN19G3087 Fragaria x ananassa HOM05D007076 ORTHO05D008800 4.2e-91 338.6 195 79.5
Gohir.A05G012200 Gossypium hirsutum HOM05D007076 ORTHO05D008800 4.2e-91 338.6 193 79.3
THA.LOC104817530 Tarenaya hassleriana HOM05D007076 ORTHO05D008800 5.5e-91 338.2 248 67.3
Gorai.009G013300 Gossypium raimondii HOM05D007076 ORTHO05D008800 9.4e-91 337.4 193 79.8
RcHm_v2.0_Chr2g0086841 Rosa chinensis HOM05D007076 ORTHO05D008800 1.2e-90 337.0 195 78.5
Thecc.09G139600 Theobroma cacao HOM05D007076 ORTHO05D008800 1.2e-90 337.0 195 78.5
MD15G1161100 Malus domestica HOM05D007076 ORTHO05D008800 2.1e-90 336.3 196 80.1
Eucgr.C04107 Eucalyptus grandis HOM05D007076 ORTHO05D008800 3.6e-90 335.5 200 77.5
Gohir.D05G013300 Gossypium hirsutum HOM05D007076 ORTHO05D008800 1.0e-89 334.0 193 79.3
COL.COLO4_24128 Corchorus olitorius HOM05D007076 ORTHO05D008800 1.4e-89 333.6 196 77.6
Prupe.7G256300 Prunus persica HOM05D007076 ORTHO05D008800 4.0e-89 332.0 195 77.4
TWI34G1052 Tripterygium wilfordii HOM05D007076 ORTHO05D008800 4.0e-89 332.0 193 80.8
Nitab4.5_0003305g0010 Nicotiana tabacum HOM05D007076 ORTHO05D008800 6.8e-89 331.3 196 77.6
Manes.14G120300 Manihot esculenta HOM05D007076 ORTHO05D008800 1.5e-88 330.1 193 76.7
PGR142G4145 Punica granatum HOM05D007076 ORTHO05D008800 2.6e-88 329.3 193 79.3
Solyc07g007280.4 Solanum lycopersicum HOM05D007076 ORTHO05D008800 5.7e-88 328.2 200 76.5
Nitab4.5_0008829g0010 Nicotiana tabacum HOM05D007076 ORTHO05D008800 4.8e-87 325.1 196 76.0
CiPaw.15G183500 Carya illinoinensis HOM05D007076 ORTHO05D008800 8.3e-87 324.3 200 73.0
Sed0007180 Sechium edule HOM05D007076 ORTHO05D008800 1.1e-86 323.9 199 74.4
TAR625G0498 Trochodendron aralioides HOM05D007076 ORTHO05D008800 1.4e-86 323.6 193 77.7
Lalb_Chr07g0179431 Lupinus albus HOM05D007076 ORTHO05D008800 2.4e-86 322.8 195 76.4
PGSC0003DMG400030692 Solanum tuberosum HOM05D007076 ORTHO05D008800 2.4e-86 322.8 200 75.5
CAN.G728.2 Capsicum annuum HOM05D007076 ORTHO05D008800 3.1e-86 322.4 200 76.5
Peaxi162Scf00088g00017 Petunia axillaris HOM05D007076 ORTHO05D008800 3.1e-86 322.4 204 75.0
QL02p091054 Quercus lobata HOM05D007076 ORTHO05D008800 4.1e-86 322.0 195 75.9
MELO3C010270.2 Cucumis melo HOM05D007076 ORTHO05D008800 5.3e-86 321.6 199 74.9
ClCG06G011950 Citrullus lanatus HOM05D007076 ORTHO05D008800 7.0e-86 321.2 199 74.4
Sopen07g003340 Solanum pennellii HOM05D007076 ORTHO05D008800 7.0e-86 321.2 200 75.5
Ca_21630_v3 Cicer arietinum L. HOM05D007076 ORTHO05D008800 9.1e-86 320.9 195 74.9
Ca_30692_v3 Cicer arietinum L. HOM05D007076 ORTHO05D008800 9.1e-86 320.9 195 74.9
Ciclev10009248m.g Citrus clementina HOM05D007076 ORTHO05D008800 1.2e-85 320.5 193 75.1
Actinidia21919 Actinidia chinensis HOM05D007076 ORTHO05D008800 1.6e-85 320.1 199 73.9
DCAR_017767 Daucus carota HOM05D007076 ORTHO05D008800 1.6e-85 320.1 198 76.3
vmacro21890 Vaccinium macrocarpon HOM05D007076 ORTHO05D008800 3.5e-85 318.9 201 73.6
Cpa.g.sc46.76 Carica papaya HOM05D007076 ORTHO05D008800 5.9e-85 318.2 197 75.6
Glyma.17G106200 Glycine max HOM05D007076 ORTHO05D008800 5.9e-85 318.2 195 75.4
Migut.J01262 Erythranthe guttata HOM05D007076 ORTHO05D008800 7.7e-85 317.8 193 77.2
Rhsim01G0051700 Rhododendron simsii HOM05D007076 ORTHO05D008800 1.0e-84 317.4 200 72.0
Medtr4g116350 Medicago truncatula HOM05D007076 ORTHO05D008800 1.7e-84 316.6 195 73.8
Oeu058595.1 Olea europaea HOM05D007076 ORTHO05D008800 1.7e-84 316.6 195 75.4
CsaV3_1G028410 Cucumis sativus L. HOM05D007076 ORTHO05D008800 2.2e-84 316.2 199 73.4
Potri.006G060100 Populus trichocarpa HOM05D007076 ORTHO05D008800 2.2e-84 316.2 196 73.5
MSTRG.19622 Avicennia marina HOM05D007076 ORTHO05D008800 2.9e-84 315.8 193 76.2
Lsat_1_v5_gn_7_46141 Lactuca sativa HOM05D007076 ORTHO05D008800 3.8e-84 315.5 200 72.0
Cfa020904 Carpinus fangiana HOM05D007076 ORTHO05D008800 6.5e-84 314.7 200 73.5
Glyma.13G164900 Glycine max HOM05D007076 ORTHO05D008800 6.5e-84 314.7 195 73.8
Sabra06G0043400 Salix brachista HOM05D000638 ORTHO05D000801 6.5e-84 314.7 196 74.0
VMungo1215G2969 Vigna mungo HOM05D007076 ORTHO05D008800 1.1e-83 313.9 195 72.8
Lj4g0004831 Lotus japonicus HOM05D007076 ORTHO05D008800 2.5e-83 312.8 195 72.8
Atru.chr7.279 Acer truncatum HOM05D007076 ORTHO05D008800 3.2e-83 312.4 182 78.0
TPR.G15804 Trifolium pratense HOM05D007076 ORTHO05D008800 1.2e-82 310.5 196 71.9
HanXRQChr09g0243091 Helianthus annuus HOM05D007076 ORTHO05D008800 3.6e-82 308.9 203 70.9
Psat7g049360 Pisum sativum HOM05D007076 ORTHO05D008800 1.0e-81 307.4 195 71.3
FAN28G0280 Fragaria x ananassa HOM05D007076 ORTHO05D008800 1.4e-81 307.0 195 74.4
AUR62041461 Chenopodium quinoa HOM05D007076 ORTHO05D008800 1.8e-81 306.6 197 73.6
Nn2g12218 Nelumbo nucifera HOM05D007076 ORTHO05D008800 1.8e-81 306.6 201 72.1
Nn1g00072 Nelumbo nucifera HOM05D007076 ORTHO05D008800 2.3e-81 306.2 204 71.1
PSO170G2339 Papaver somniferum HOM05D007076 ORTHO05D008800 5.2e-81 305.1 201 70.1
EL10Ac8g18804 Beta vulgaris HOM05D007076 ORTHO05D008800 2.6e-80 302.8 207 71.5
Aqoxy7G02462 Aquilegia oxysepala HOM05D007076 ORTHO05D008800 4.4e-80 302.0 194 73.2
Ah.00g000030 Amaranthus hybridus HOM05D007076 ORTHO05D008800 7.5e-80 301.2 195 72.8
Cc06_g07520 Coffea canephora HOM05D007076 ORTHO05D008800 1.3e-79 300.4 236 61.9
PSO017G3183 Papaver somniferum HOM05D007076 ORTHO05D008800 1.3e-79 300.4 197 71.1
Lj9A706G31 Lonicera japonica HOM05D007076 ORTHO05D008800 4.8e-79 298.5 175 78.3
Dinv41435 Davidia involucrata HOM05D007076 ORTHO05D008800 1.8e-78 296.6 194 71.1
CDE05G2705 Ceratophyllum demersum HOM05D007076 ORTHO05D008800 2.4e-78 296.2 205 67.8
MBI14_g03617_MAGBIO Magnolia biondii HOM05D007076 ORTHO05D008800 5.4e-78 295.0 206 70.4
Phvul.003G173400 Phaseolus vulgaris HOM05D007076 ORTHO05D008800 5.4e-78 295.0 179 73.7
Atru.BG.23.p Acer truncatum HOM05D007076 ORTHO05D008800 4.5e-77 292.0 176 77.3
Os08g0167500 Oryza sativa ssp. japonica HOM05D007076 ORTHO05D008800 4.5e-77 292.0 201 69.2
SalBow1G5229 Salvia bowleyana HOM05D007076 ORTHO05D008800 5.9e-77 291.6 194 73.2
ATR0681G287 Amborella trichopoda HOM05D007076 ORTHO05D008800 1.3e-76 290.4 193 69.4
ECA240G2388 Erigeron canadensis HOM05D007076 ORTHO05D008800 2.9e-76 289.3 168 78.0
Zm00001eb172070 Zea mays HOM05D007076 ORTHO05D008800 4.2e-75 285.4 196 68.9
Haze_19333 Corylus avellana HOM05D007076 ORTHO05D008800 2.0e-72 276.6 200 65.5
arahy.Tifrunner.gnm1.ann1.W7VCER Arachis hypogaea HOM05D007076 ORTHO05D008800 4.4e-72 275.4 195 67.2
Duzib187G0567 Durio zibethinus HOM05D007076 ORTHO05D008800 1.6e-69 266.9 167 73.1
unitig_37.g12628 Utricularia gibba HOM05D007076 ORTHO05D008800 2.0e-69 266.5 164 74.4
arahy.Tifrunner.gnm1.ann1.80N34X Arachis hypogaea HOM05D007076 ORTHO05D008800 1.0e-60 237.7 195 59.0
AUR62011242 Chenopodium quinoa HOM05D007076 ORTHO05D008800 8.6e-60 234.6 197 59.9
Nn3g21909 Nelumbo nucifera HOM05D007076 ORTHO05D008800 3.1e-57 226.1 179 62.0
Mapoly0095s0056 Marchantia polymorpha HOM05D007076 ORTHO05D008800 1.2e-56 224.2 197 55.3
SMO119G0333 Selaginella moellendorffii HOM05D007076 ORTHO05D008800 1.2e-56 224.2 175 57.7
Nn1g04045 Nelumbo nucifera HOM05D007076 ORTHO05D008800 2.9e-55 219.5 138 72.5
Pp3c22_2510 Physcomitrium patens HOM05D007076 ORTHO05D008800 1.9e-54 216.9 201 51.2
Migut.J01256 Erythranthe guttata HOM05D007076 ORTHO05D008800 5.6e-35 152.1 124 62.1
AagrBONN_evm.TU.Sc2ySwM_362.135 Anthoceros agrestis HOM05D007076 ORTHO05D008800 2.6e-32 143.3 150 47.3
Nn1g02289 Nelumbo nucifera HOM05D007076 ORTHO05D008800 2.4e-22 110.2 74 68.9
CSS0010696 Camellia sinensis var. sinensis HOM05D007076 ORTHO05D008800 4.2e-22 109.4 63 74.6
MD02G1016600 Malus domestica HOM05D007076 ORTHO05D008800 9.3e-22 108.2 196 37.2
Oeu028011.1 Olea europaea HOM05D007076 ORTHO05D008800 2.3e-20 103.6 169 39.1
CSS0049676 Camellia sinensis var. sinensis HOM05D007076 ORTHO05D008800 3.0e-20 103.2 59 74.6
Nn1g02288 Nelumbo nucifera HOM05D007076 ORTHO05D008800 2.1e-18 97.1 84 59.5
CBR_g8382 Chara braunii HOM05D007076 ORTHO05D008800 5.7e-11 72.4 61 54.1


User provided reference genes

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