Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g29478 Brassica carinata HOM05D008960 ORTHO05D021621 3.7e-310 1067.4 547 100.0
BcaC03g18085 Brassica carinata HOM05D008960 ORTHO05D021621 5.6e-250 867.5 438 100.0
BolC2t12209H Brassica oleracea HOM05D008960 ORTHO05D021621 5.6e-250 867.5 438 100.0
A06p00150 Brassica napus HOM05D008960 ORTHO05D021621 1.1e-205 720.3 424 89.2
A07p28910 Brassica napus HOM05D008960 ORTHO05D021621 8.8e-203 710.7 424 88.0
BraA07t30533Z Brassica rapa HOM05D008960 ORTHO05D021621 8.8e-203 710.7 424 88.0
C06p42770 Brassica napus HOM05D008960 ORTHO05D033710 2.4e-139 500.0 479 63.0
C07p37270 Brassica napus HOM05D008960 ORTHO05D041838 6.1e-87 325.9 175 90.9
BolC7t44237H Brassica oleracea HOM05D008960 ORTHO05D041838 6.1e-87 325.9 175 90.9
BcaC01g00023 Brassica carinata HOM05D008960 ORTHO05D091451 2.3e-78 297.4 227 71.8
BcaC05g24287 Brassica carinata HOM05D008960 ORTHO05D032503 4.1e-75 286.6 173 90.2
C09p68970 Brassica napus HOM05D008960 ORTHO05D032503 2.5e-72 277.3 171 88.3
C03p49100 Brassica napus HOM05D008960 ORTHO05D019923 7.2e-72 275.8 224 66.5
C08p09880 Brassica napus HOM05D008960 ORTHO05D019923 8.0e-71 272.3 224 66.1
BolC8t48664H Brassica oleracea HOM05D008960 ORTHO05D019923 1.0e-70 271.9 224 66.1
BcaC07g38237 Brassica carinata HOM05D008960 ORTHO05D019923 3.0e-70 270.4 224 65.6
C02p03040 Brassica napus HOM05D008960 ORTHO05D019923 2.0e-69 267.7 224 65.6
C06p23680 Brassica napus HOM05D008960 ORTHO05D019923 1.7e-68 264.6 224 65.2
C03p18280 Brassica napus HOM05D008960 ORTHO05D021862 2.8e-68 263.8 295 56.6
BolC3t14226H Brassica oleracea HOM05D008960 ORTHO05D021862 2.8e-68 263.8 295 56.6
BraA10t42359Z Brassica rapa HOM05D008960 ORTHO05D019923 3.1e-67 260.4 220 65.0
BolC3t14293H Brassica oleracea HOM05D008960 ORTHO05D021862 2.0e-66 257.7 302 56.6
BcaC06g35218 Brassica carinata HOM05D008960 ORTHO05D091464 1.5e-64 251.5 279 53.8
BcaB04g17812 Brassica carinata HOM05D008960 ORTHO05D021862 3.2e-64 250.4 252 57.5
BolC3t19742H Brassica oleracea HOM05D008960 ORTHO05D032503 4.0e-62 243.4 155 87.7
BcaB04g20772 Brassica carinata HOM05D008960 ORTHO05D093326 5.6e-48 196.4 172 65.7
BcaC08g46605 Brassica carinata HOM05D008960 ORTHO05D093223 1.6e-47 194.9 180 63.9
BcaC01g00787 Brassica carinata HOM05D008960 ORTHO05D094263 3.3e-32 144.1 84 90.5
BolC6t39163H Brassica oleracea HOM05D008960 ORTHO05D033710 2.4e-27 127.9 260 40.4
BcaNung05738 Brassica carinata HOM05D011932 ORTHO05D023872 3.2e-27 127.5 196 49.5
C06p39950 Brassica napus HOM05D011932 ORTHO05D023872 4.1e-27 127.1 196 50.0
BcaC07g41369 Brassica carinata HOM05D011932 ORTHO05D024153 3.0e-25 120.9 167 52.7
BcaC08g46608 Brassica carinata HOM05D008960 ORTHO05D094201 6.6e-25 119.8 144 54.9
BolC2t11672H Brassica oleracea HOM05D011932 ORTHO05D023872 6.6e-25 119.8 196 50.0
BcaB06g25872 Brassica carinata HOM05D011932 ORTHO05D094935 1.5e-24 118.6 173 50.9
BcaC03g17616 Brassica carinata HOM05D011932 ORTHO05D024153 1.5e-24 118.6 196 50.0
BraA09t36250Z Brassica rapa HOM05D011932 ORTHO05D024153 3.6e-23 114.0 181 49.2
BraA09t40506Z Brassica rapa HOM05D011932 ORTHO05D023872 3.6e-23 114.0 181 49.2
A10p24070 Brassica napus HOM05D009661 ORTHO05D018783 8.1e-23 112.8 317 37.2
BraA10t44470Z Brassica rapa HOM05D009661 ORTHO05D018783 8.1e-23 112.8 317 37.2
C03p64400 Brassica napus HOM05D009661 ORTHO05D018783 1.2e-21 109.0 198 43.4
A06p35440 Brassica napus HOM05D009661 ORTHO05D018783 7.6e-21 106.3 272 38.6
BraA06t26467Z Brassica rapa HOM05D009661 ORTHO05D018783 7.6e-21 106.3 272 38.6
C06p25450 Brassica napus HOM05D009661 ORTHO05D020160 6.4e-20 103.2 385 33.2
BolC4t22728H Brassica oleracea HOM05D011932 ORTHO05D023872 6.4e-20 103.2 143 53.8
C04p59470 Brassica napus HOM05D007694 ORTHO05D041000 1.9e-19 101.7 271 35.4
BolC4t27454H Brassica oleracea HOM05D007694 ORTHO05D041000 1.9e-19 101.7 219 39.3
C06p07090 Brassica napus HOM05D009661 ORTHO05D020160 4.2e-19 100.5 194 42.8
C07p18550 Brassica napus HOM05D008960 ORTHO05D103607 9.3e-19 99.4 200 35.0
BcaC01g05426 Brassica carinata HOM05D008960 ORTHO05D021862 1.7e-17 95.1 104 60.6
C01p02030 Brassica napus HOM05D009661 ORTHO05D020160 3.0e-17 94.4 100 55.0
BcaC01g06122 Brassica carinata HOM05D008960 ORTHO05D021862 5.1e-17 93.6 104 59.6
BcaB05g22322 Brassica carinata HOM05D008960 ORTHO05D093631 9.6e-16 89.4 155 44.5
BcaB08g35388 Brassica carinata HOM05D007694 ORTHO05D003268 4.9e-12 77.0 81 54.3
C02p55990 Brassica napus HOM05D010036 ORTHO05D018636 4.9e-12 77.0 216 34.7
C04p38540 Brassica napus HOM05D007694 ORTHO05D023849 6.4e-12 76.6 135 40.0
BolC6t35963H Brassica oleracea HOM05D007694 ORTHO05D032221 6.4e-12 76.6 220 37.7
C05p07860 Brassica napus HOM05D007694 ORTHO05D023849 8.4e-12 76.3 79 53.2
C02p22430 Brassica napus HOM05D007694 ORTHO05D023849 1.1e-11 75.9 63 63.5
BolC6t35800H Brassica oleracea HOM05D009661 ORTHO05D020160 1.1e-11 75.9 141 41.8
C07p48840 Brassica napus HOM05D011932 ORTHO05D024153 1.4e-11 75.5 112 52.7
BolC7t45392H Brassica oleracea HOM05D011932 ORTHO05D024153 1.4e-11 75.5 112 52.7
C03p84280 Brassica napus HOM05D007694 ORTHO05D019969 1.9e-11 75.1 91 48.4
BcaC05g29803 Brassica carinata HOM05D007694 ORTHO05D019969 2.4e-11 74.7 91 48.4
C09p47680 Brassica napus HOM05D007694 ORTHO05D023849 3.2e-11 74.3 63 61.9
BolC6t38926H Brassica oleracea HOM05D009661 ORTHO05D018783 3.2e-11 74.3 125 43.2
C06p38270 Brassica napus HOM05D009661 ORTHO05D018783 5.4e-11 73.6 123 43.1
BcaB02g07104 Brassica carinata HOM05D007694 ORTHO05D093325 9.3e-11 72.8 102 46.1
C03p14610 Brassica napus HOM05D007694 ORTHO05D019969 1.2e-10 72.4 91 47.3
C02p29800 Brassica napus HOM05D007694 ORTHO05D097335 1.6e-10 72.0 92 47.8
BolC6t37706H Brassica oleracea HOM05D009661 ORTHO05D020160 2.1e-10 71.6 125 42.4
BraA07t31746Z Brassica rapa HOM05D008960 ORTHO05D108237 2.1e-10 71.6 50 70.0
C06p08850 Brassica napus HOM05D007694 ORTHO05D032221 3.5e-10 70.9 220 36.8
A07p16610 Brassica napus HOM05D009661 ORTHO05D018783 6.0e-10 70.1 52 71.2
A06p27480 Brassica napus HOM05D011932 ORTHO05D096777 1.5e-08 65.5 79 54.4
BcaC01g01501 Brassica carinata HOM05D007694 ORTHO05D023849 1.6e-07 62.0 65 55.4
BcaB04g18319 Brassica carinata HOM05D007694 ORTHO05D091879 5.3e-06 57.0 98 35.7
C08p15900 Brassica napus HOM05D021780 ORTHO05D021716 5.3e-06 57.0 75 50.7
BolC8t49214H Brassica oleracea HOM05D021780 ORTHO05D021716 5.3e-06 57.0 75 50.7
BcaC08g43501 Brassica carinata HOM05D007694 ORTHO05D032221 6.9e-06 56.6 219 33.3


User provided reference genes

Program Settings