Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g29223 Brassica carinata HOM05D003648 ORTHO05D004267 1.7e-71 273.5 258 100.0
BcaC02g07267 Brassica carinata HOM05D003648 ORTHO05D004267 1.5e-51 207.2 260 64.6
C04p69480 Brassica napus HOM05D003648 ORTHO05D004267 3.3e-51 206.1 261 60.9
BolC4t28447H Brassica oleracea HOM05D003648 ORTHO05D004267 5.7e-51 205.3 263 60.8
A04p31970 Brassica napus HOM05D003648 ORTHO05D004267 2.4e-49 199.9 258 65.5
BcaB01g03435 Brassica carinata HOM05D003648 ORTHO05D004267 2.1e-45 186.8 271 52.8
C03p28080 Brassica napus HOM05D003648 ORTHO05D004267 1.5e-43 180.6 276 49.6
BcaC01g05312 Brassica carinata HOM05D003648 ORTHO05D004267 1.9e-43 180.3 266 50.8
BraA04t18655Z Brassica rapa HOM05D003648 ORTHO05D004267 4.3e-43 179.1 258 67.4
BraA03t11571Z Brassica rapa HOM05D003648 ORTHO05D004267 5.7e-43 178.7 275 49.1
A03p23540 Brassica napus HOM05D003648 ORTHO05D004267 1.3e-42 177.6 274 50.0
BraA05t19262Z Brassica rapa HOM05D003648 ORTHO05D004267 2.8e-42 176.4 258 57.4
Carub.0004s2437 Capsella rubella HOM05D003648 ORTHO05D004267 4.8e-42 175.6 264 54.2
A05p02700 Brassica napus HOM05D003648 ORTHO05D004267 6.3e-42 175.3 258 57.0
BcaC02g12455 Brassica carinata HOM05D003648 ORTHO05D004267 1.1e-41 174.5 256 55.5
C04p03220 Brassica napus HOM05D003648 ORTHO05D004267 1.1e-41 174.5 256 55.5
BolC4t21960H Brassica oleracea HOM05D003648 ORTHO05D004267 1.1e-41 174.5 256 55.5
CARHR137130 Cardamine hirsuta HOM05D003648 ORTHO05D004267 1.1e-41 174.5 277 51.3
AL4G40410 Arabidopsis lyrata HOM05D003648 ORTHO05D004267 2.4e-41 173.3 264 53.0
Thhalv10017052m.g Eutrema salsugineum HOM05D003648 ORTHO05D004267 3.4e-40 169.5 284 59.5
AT2G42040 Arabidopsis thaliana HOM05D003648 ORTHO05D004267 1.6e-37 160.6 262 49.2
SpUn1032_0010 Schrenkiella parvula HOM05D003648 ORTHO05D004267 2.4e-33 146.7 193 63.7
BolC3t15177H Brassica oleracea HOM05D003648 ORTHO05D004267 5.9e-32 142.1 114 71.1
Aa31LG1G24140 Aethionema arabicum HOM05D003648 ORTHO05D004267 1.8e-28 130.6 268 54.5
THA.LOC104802623 Tarenaya hassleriana HOM05D003648 ORTHO05D004267 4.2e-22 109.4 304 37.8
GSVIVG01033486001 Vitis vinifera HOM05D003648 ORTHO05D004267 6.1e-21 105.5 84 61.9
MELO3C009616.2 Cucumis melo HOM05D003648 ORTHO05D004267 3.3e-19 99.8 128 46.1
Gohir.A01G137604 Gossypium hirsutum HOM05D003648 ORTHO05D004267 3.3e-19 99.8 106 53.8
THA.LOC104824476 Tarenaya hassleriana HOM05D003648 ORTHO05D004267 7.5e-19 98.6 289 32.5
Gohir.D01G125600 Gossypium hirsutum HOM05D003648 ORTHO05D004267 1.7e-18 97.4 108 63.9
Gorai.002G156300 Gossypium raimondii HOM05D003648 ORTHO05D004267 1.7e-18 97.4 108 63.9
Oeu039811.1 Olea europaea HOM05D003648 ORTHO05D004267 2.8e-18 96.7 80 61.2
Sed0001893 Sechium edule HOM05D003648 ORTHO05D004267 2.8e-18 96.7 100 53.0
ClCG10G017600 Citrullus lanatus HOM05D003648 ORTHO05D004267 6.3e-18 95.5 108 57.4
Eucgr.A02456 Eucalyptus grandis HOM05D003648 ORTHO05D004267 6.3e-18 95.5 122 52.5
Peaxi162Scf00480g00036 Petunia axillaris HOM05D003648 ORTHO05D004267 6.3e-18 95.5 124 45.2
Dinv24064 Davidia involucrata HOM05D003648 ORTHO05D004267 8.2e-18 95.1 107 64.5
Nn2g15698 Nelumbo nucifera HOM05D003648 ORTHO05D004267 1.1e-17 94.7 107 51.4
Oeu007752.1 Olea europaea HOM05D003648 ORTHO05D004267 1.4e-17 94.4 77 62.3
TAR369G0578 Trochodendron aralioides HOM05D003648 ORTHO05D004267 1.4e-17 94.4 106 64.2
Phvul.007G260600 Phaseolus vulgaris HOM05D003648 ORTHO05D004267 2.4e-17 93.6 115 49.6
Hund19206 Selenicereus undatus HOM05D003648 ORTHO05D004267 2.4e-17 93.6 92 54.3
Phvul.001G143000 Phaseolus vulgaris HOM05D003648 ORTHO05D004267 3.1e-17 93.2 117 51.3
Actinidia22042 Actinidia chinensis HOM05D003648 ORTHO05D004267 4.1e-17 92.8 116 46.6
Nitab4.5_0003600g0010 Nicotiana tabacum HOM05D003648 ORTHO05D004267 4.1e-17 92.8 105 49.5
Nitab4.5_0006890g0010 Nicotiana tabacum HOM05D003648 ORTHO05D004267 7.0e-17 92.0 105 61.9
Ah.13g075770 Amaranthus hybridus HOM05D003648 ORTHO05D004267 9.1e-17 91.7 91 53.8
CAN.G128.46 Capsicum annuum HOM05D003648 ORTHO05D004267 9.1e-17 91.7 126 54.8
CsaV3_3G038720 Cucumis sativus L. HOM05D003648 ORTHO05D004267 9.1e-17 91.7 114 53.5
Medtr1g054175 Medicago truncatula HOM05D003648 ORTHO05D004267 9.1e-17 91.7 121 45.5
EL10Ac3g06898 Beta vulgaris HOM05D003648 ORTHO05D004267 1.2e-16 91.3 121 43.8
CSS0001516 Camellia sinensis var. sinensis HOM05D003648 ORTHO05D004267 1.2e-16 91.3 119 45.4
VMungo0720G1699 Vigna mungo HOM05D003648 ORTHO05D004267 1.2e-16 91.3 131 45.8
TWI53G1880 Tripterygium wilfordii HOM05D003648 ORTHO05D004267 1.6e-16 90.9 110 48.2
HPP92_016181 Vanilla planifolia HOM05D003648 ORTHO05D004267 1.6e-16 90.9 98 50.0
HPP92_026735 Vanilla planifolia HOM05D003648 ORTHO05D004267 1.6e-16 90.9 98 50.0
Hma1.2p1_0431F.1_g151600 Hydrangea macrophylla HOM05D003648 ORTHO05D004267 2.0e-16 90.5 119 44.5
Sabra06G0148600 Salix brachista HOM05D003648 ORTHO05D004267 2.0e-16 90.5 125 44.8
TWI77G0250 Tripterygium wilfordii HOM05D003648 ORTHO05D004267 2.0e-16 90.5 120 45.0
CAN.G128.47 Capsicum annuum HOM05D003648 ORTHO05D004267 2.7e-16 90.1 123 54.5
Cc06_g15770 Coffea canephora HOM05D003648 ORTHO05D004267 2.7e-16 90.1 122 43.4
FAN09G0401 Fragaria x ananassa HOM05D003648 ORTHO05D004267 2.7e-16 90.1 133 42.9
Glyma.03G145500 Glycine max HOM05D003648 ORTHO05D004267 2.7e-16 90.1 127 43.3
Manes.08G043500 Manihot esculenta HOM05D003648 ORTHO05D004267 2.7e-16 90.1 111 48.6
vmacro07898 Vaccinium macrocarpon HOM05D003648 ORTHO05D004267 2.7e-16 90.1 112 50.9
Ah.04g152510 Amaranthus hybridus HOM05D003648 ORTHO05D004267 3.5e-16 89.7 118 50.0
MSTRG.6486 Avicennia marina HOM05D003648 ORTHO05D004267 3.5e-16 89.7 93 61.3
Solyc10g080530.2 Solanum lycopersicum HOM05D003648 ORTHO05D004267 3.5e-16 89.7 115 54.8
PGSC0003DMG400023669 Solanum tuberosum HOM05D003648 ORTHO05D004267 3.5e-16 89.7 116 55.2
TPR.G15988 Trifolium pratense HOM05D003648 ORTHO05D004267 3.5e-16 89.7 110 49.1
Aqoxy2G00100 Aquilegia oxysepala HOM05D003648 ORTHO05D004267 4.5e-16 89.4 84 54.8
Gohir.A04G053800 Gossypium hirsutum HOM05D003648 ORTHO05D004267 4.5e-16 89.4 134 42.5
Gohir.D04G089900 Gossypium hirsutum HOM05D003648 ORTHO05D004267 4.5e-16 89.4 128 43.0
Gorai.012G100300 Gossypium raimondii HOM05D003648 ORTHO05D004267 4.5e-16 89.4 128 43.0
Lsat_1_v5_gn_9_26100 Lactuca sativa HOM05D003648 ORTHO05D004267 4.5e-16 89.4 110 46.4
TPR.G18228 Trifolium pratense HOM05D003648 ORTHO05D004267 4.5e-16 89.4 116 46.6
Glyma.09G110100 Glycine max HOM05D003648 ORTHO05D004267 5.9e-16 89.0 127 44.9
Lj1g0001044 Lotus japonicus HOM05D003648 ORTHO05D004267 5.9e-16 89.0 134 44.8
Potri.016G058100 Populus trichocarpa HOM05D003648 ORTHO05D004267 5.9e-16 89.0 126 42.9
VMungo1383G3335 Vigna mungo HOM05D003648 ORTHO05D004267 5.9e-16 89.0 121 51.2
CDE05G0371 Ceratophyllum demersum HOM05D003648 ORTHO05D004267 7.7e-16 88.6 94 52.1
Medtr7g093360 Medicago truncatula HOM05D003648 ORTHO05D004267 7.7e-16 88.6 120 57.5
MSTRG.19911 Avicennia marina HOM05D003648 ORTHO05D004267 1.0e-15 88.2 100 50.0
Manes.09G036200 Manihot esculenta HOM05D003648 ORTHO05D004267 1.0e-15 88.2 137 50.4
Nn7g35986 Nelumbo nucifera HOM05D003648 ORTHO05D004267 1.0e-15 88.2 43 88.4
TAR633G0715 Trochodendron aralioides HOM05D003648 ORTHO05D004267 1.0e-15 88.2 115 59.1
FAN05G4067 Fragaria x ananassa HOM05D003648 ORTHO05D004267 1.3e-15 87.8 133 42.1
Sabra16G0061500 Salix brachista HOM05D003648 ORTHO05D004267 1.3e-15 87.8 124 43.5
CiPaw.10G026000 Carya illinoinensis HOM05D003648 ORTHO05D004267 1.7e-15 87.4 121 45.5
Duzib128G0816 Durio zibethinus HOM05D003648 ORTHO05D004267 1.7e-15 87.4 139 39.6
Glyma.02G171900 Glycine max HOM05D003648 ORTHO05D004267 1.7e-15 87.4 124 45.2
Potri.006G193300 Populus trichocarpa HOM05D003648 ORTHO05D004267 1.7e-15 87.4 135 43.0
Migut.J01846 Erythranthe guttata HOM05D003648 ORTHO05D004267 2.2e-15 87.0 106 45.3
Atru.chr8.1128 Acer truncatum HOM05D003648 ORTHO05D004267 2.9e-15 86.7 120 47.5
Cpa.g.sc85.54 Carica papaya HOM05D003648 ORTHO05D004267 2.9e-15 86.7 121 52.1
CiPaw.09G029700 Carya illinoinensis HOM05D003648 ORTHO05D004267 2.9e-15 86.7 122 45.1
Ciclev10012160m.g Citrus clementina HOM05D003648 ORTHO05D004267 2.9e-15 86.7 121 53.7
FvH4_6g22070 Fragaria vesca HOM05D003648 ORTHO05D004267 2.9e-15 86.7 133 40.6
FAN02G2154 Fragaria x ananassa HOM05D003648 ORTHO05D004267 2.9e-15 86.7 133 40.6
FAN14G0601 Fragaria x ananassa HOM05D003648 ORTHO05D004267 2.9e-15 86.7 133 40.6
Glyma.19G148700 Glycine max HOM05D003648 ORTHO05D004267 2.9e-15 86.7 129 41.1
MD14G1055800 Malus domestica HOM05D003648 ORTHO05D004267 3.8e-15 86.3 41 90.2
Medtr7g093350 Medicago truncatula HOM05D003648 ORTHO05D004267 3.8e-15 86.3 120 56.7
Nn7g35998 Nelumbo nucifera HOM05D003648 ORTHO05D004267 3.8e-15 86.3 43 86.0
Potri.016G058000 Populus trichocarpa HOM05D003648 ORTHO05D004267 3.8e-15 86.3 41 90.2
Prupe.7G079000 Prunus persica HOM05D003648 ORTHO05D004267 3.8e-15 86.3 42 88.1
Sabra16G0061400 Salix brachista HOM05D003648 ORTHO05D004267 3.8e-15 86.3 41 90.2
GSVIVG01033479001 Vitis vinifera HOM05D003648 ORTHO05D004267 3.8e-15 86.3 102 49.0
DCAR_013539 Daucus carota HOM05D003648 ORTHO05D004267 5.0e-15 85.9 46 80.4
Dinv16371 Davidia involucrata HOM05D003648 ORTHO05D004267 5.0e-15 85.9 92 50.0
Potri.006G193500 Populus trichocarpa HOM05D003648 ORTHO05D004267 5.0e-15 85.9 126 42.9
arahy.Tifrunner.gnm1.ann1.DZ4RFW Arachis hypogaea HOM05D003648 ORTHO05D004267 6.5e-15 85.5 118 59.3
Dinv14314 Davidia involucrata HOM05D003648 ORTHO05D004267 6.5e-15 85.5 41 87.8
Lalb_Chr18g0047911 Lupinus albus HOM05D003648 ORTHO05D004267 6.5e-15 85.5 126 44.4
Lalb_Chr18g0047921 Lupinus albus HOM05D003648 ORTHO05D004267 6.5e-15 85.5 126 42.9
RcHm_v2.0_Chr3g0479411 Rosa chinensis HOM05D003648 ORTHO05D004267 6.5e-15 85.5 133 39.8
Rhsim03G0005500 Rhododendron simsii HOM05D003648 ORTHO05D004267 8.5e-15 85.1 40 90.0
DCAR_017003 Daucus carota HOM05D003648 ORTHO05D004267 1.1e-14 84.7 43 83.7
Nn2g15714 Nelumbo nucifera HOM05D003648 ORTHO05D004267 1.1e-14 84.7 40 90.0
Actinidia22043 Actinidia chinensis HOM05D003648 ORTHO05D004267 1.5e-14 84.3 122 41.8
arahy.Tifrunner.gnm1.ann1.D8BKSU Arachis hypogaea HOM05D003648 ORTHO05D004267 1.5e-14 84.3 42 90.5
CANSAT64G1307 Cannabis sativa HOM05D003648 ORTHO05D004267 1.5e-14 84.3 39 92.3
COL.COLO4_29331 Corchorus olitorius HOM05D003648 ORTHO05D004267 1.5e-14 84.3 39 92.3
Haze_20001 Corylus avellana HOM05D003648 ORTHO05D004267 1.5e-14 84.3 39 92.3
Haze_20003 Corylus avellana HOM05D003648 ORTHO05D004267 1.5e-14 84.3 39 92.3
Duzib093G1879 Durio zibethinus HOM05D003648 ORTHO05D004267 1.5e-14 84.3 128 43.8
Gohir.1Z049549 Gossypium hirsutum HOM05D003648 ORTHO05D004267 1.5e-14 84.3 39 92.3
Manes.08G043600 Manihot esculenta HOM05D003648 ORTHO05D004267 1.5e-14 84.3 39 92.3
Thecc.05G173300 Theobroma cacao HOM05D003648 ORTHO05D004267 1.5e-14 84.3 39 92.3
QL07p024078 Quercus lobata HOM05D003648 ORTHO05D004267 1.9e-14 84.0 123 43.9
Psat3g068040 Pisum sativum HOM05D003648 ORTHO05D004267 2.5e-14 83.6 41 85.4
Lj5g0018704 Lotus japonicus HOM05D003648 ORTHO05D004267 3.2e-14 83.2 37 94.6
MBI19_g43859_MAGBIO Magnolia biondii HOM05D003648 ORTHO05D004267 3.2e-14 83.2 42 83.3
TAR623G0235 Trochodendron aralioides HOM05D003648 ORTHO05D004267 3.2e-14 83.2 37 94.6
Cfa020157 Carpinus fangiana HOM05D003648 ORTHO05D004267 4.2e-14 82.8 131 42.0
MBI19_g03064_MAGBIO Magnolia biondii HOM05D003648 ORTHO05D004267 4.2e-14 82.8 43 81.4
MD12G1056100 Malus domestica HOM05D003648 ORTHO05D004267 4.2e-14 82.8 154 37.0
Os02g0773600 Oryza sativa ssp. japonica HOM05D003648 ORTHO05D004267 4.2e-14 82.8 47 78.7
arahy.Tifrunner.gnm1.ann1.AL1Y46 Arachis hypogaea HOM05D003648 ORTHO05D004267 7.2e-14 82.0 39 89.7
arahy.Tifrunner.gnm1.ann1.SE7UXR Arachis hypogaea HOM05D003648 ORTHO05D004267 7.2e-14 82.0 39 89.7
HanXRQChr10g0289891 Helianthus annuus HOM05D003648 ORTHO05D004267 7.2e-14 82.0 45 77.8
MBI13_g32435_MAGBIO Magnolia biondii HOM05D003648 ORTHO05D004267 7.2e-14 82.0 37 91.9
PGR004G0238 Punica granatum HOM05D003648 ORTHO05D004267 7.2e-14 82.0 43 86.0
Actinidia32398 Actinidia chinensis HOM05D003648 ORTHO05D004267 9.4e-14 81.6 40 87.5
CDE04G2150 Ceratophyllum demersum HOM05D003648 ORTHO05D004267 9.4e-14 81.6 96 47.9
CDE06G0452 Ceratophyllum demersum HOM05D003648 ORTHO05D004267 9.4e-14 81.6 96 47.9
CDE11G0439 Ceratophyllum demersum HOM05D003648 ORTHO05D004267 2.7e-13 80.1 37 94.6
Os06g0207600 Oryza sativa ssp. japonica HOM05D003648 ORTHO05D004267 2.7e-13 80.1 41 85.4
AUR62015354 Chenopodium quinoa HOM05D003648 ORTHO05D004267 3.6e-13 79.7 127 40.9
ECA247G1467 Erigeron canadensis HOM05D003648 ORTHO05D004267 3.6e-13 79.7 40 82.5
Psat0s5171g0040 Pisum sativum HOM05D003648 ORTHO05D004267 6.1e-13 79.0 37 89.2
Sabra06G0148400 Salix brachista HOM05D003648 ORTHO05D004267 1.4e-12 77.8 134 38.8
MBI19_g23209_MAGBIO Magnolia biondii HOM05D003648 ORTHO05D004267 1.8e-12 77.4 39 79.5
Nn7g36026 Nelumbo nucifera HOM05D003648 ORTHO05D004267 3.0e-12 76.6 40 80.0
ATR0598G173 Amborella trichopoda HOM05D003648 ORTHO05D004267 1.2e-11 74.7 91 51.6
SalBow6G7267 Salvia bowleyana HOM05D003648 ORTHO05D004267 1.2e-11 74.7 84 51.2
SEGI_21966 Sequoiadendron giganteum HOM05D003648 ORTHO05D004267 1.5e-11 74.3 45 68.9
Zm00001eb193290 Zea mays HOM05D003648 ORTHO05D004267 1.5e-11 74.3 48 64.6
SEGI_09004 Sequoiadendron giganteum HOM05D003648 ORTHO05D004267 7.5e-11 72.0 48 60.4
SEGI_34260 Sequoiadendron giganteum HOM05D003648 ORTHO05D004267 7.5e-11 72.0 45 64.4
SEGI_00470 Sequoiadendron giganteum HOM05D003648 ORTHO05D004267 2.4e-09 67.0 42 66.7
SEGI_22789 Sequoiadendron giganteum HOM05D003648 ORTHO05D004267 1.2e-08 64.7 38 68.4
Actinidia22048 Actinidia chinensis HOM05D003648 ORTHO05D014310 1.7e-07 60.8 96 36.5
Dinv36431 Davidia involucrata HOM05D003648 ORTHO05D004267 1.7e-07 60.8 30 83.3
ATR0598G250 Amborella trichopoda HOM05D003648 ORTHO05D004267 1.1e-06 58.2 39 59.0
Aqoxy1G04270 Aquilegia oxysepala HOM05D003648 ORTHO05D004267 4.2e-06 56.2 37 59.5
Gohir.A01G190633 Gossypium hirsutum HOM05D014635 ORTHO05D014310 9.4e-06 55.1 82 36.6


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