Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g29159 Brassica carinata HOM05D005421 ORTHO05D031077 9.3e-16 87.0 44 100.0
SGA_v2.0_scaffold4G01947 Striga asiatica HOM05D005421 ORTHO05D007601 1.9e-08 62.8 43 79.1
CSS0007056 Camellia sinensis var. sinensis HOM05D005421 ORTHO05D007601 9.3e-08 60.5 40 77.5
CSS0046729 Camellia sinensis var. sinensis HOM05D005421 ORTHO05D007601 9.3e-08 60.5 40 77.5
BolC4t28347H Brassica oleracea HOM05D005421 ORTHO05D007601 7.9e-07 57.4 32 84.4
BcaB01g03524 Brassica carinata HOM05D005421 ORTHO05D007601 1.0e-06 57.0 31 87.1
Sp4g22980 Schrenkiella parvula HOM05D005421 ORTHO05D007601 1.0e-06 57.0 46 69.6
AL4G38520 Arabidopsis lyrata HOM05D005421 ORTHO05D007601 1.3e-06 56.6 30 86.7
BcaB06g29163 Brassica carinata HOM05D005421 ORTHO05D031077 1.3e-06 56.6 30 90.0
BcaB06g29166 Brassica carinata HOM05D005421 ORTHO05D007601 1.3e-06 56.6 30 90.0
BcaC01g05387 Brassica carinata HOM05D005421 ORTHO05D007601 1.3e-06 56.6 30 90.0
BcaC02g07328 Brassica carinata HOM05D005421 ORTHO05D007601 2.3e-06 55.8 31 83.9
A04p31080 Brassica napus HOM05D005421 ORTHO05D007601 2.3e-06 55.8 31 83.9
C04p68470 Brassica napus HOM05D005421 ORTHO05D007601 2.3e-06 55.8 31 83.9
BraA04t18563Z Brassica rapa HOM05D005421 ORTHO05D007601 2.3e-06 55.8 31 83.9
COL.COLO4_26689 Corchorus olitorius HOM05D005421 ORTHO05D007601 2.3e-06 55.8 42 64.3
A03p22860 Brassica napus HOM05D005421 ORTHO05D007601 3.0e-06 55.5 30 86.7
C03p27110 Brassica napus HOM05D005421 ORTHO05D007601 3.0e-06 55.5 30 86.7
BolC3t15092H Brassica oleracea HOM05D005421 ORTHO05D007601 3.0e-06 55.5 30 86.7
BraA03t11510Z Brassica rapa HOM05D005421 ORTHO05D007601 3.0e-06 55.5 30 86.7
Oeu045895.1 Olea europaea HOM05D005421 ORTHO05D007601 3.9e-06 55.1 38 76.3
Dinv24409 Davidia involucrata HOM05D005421 ORTHO05D007601 5.1e-06 54.7 42 71.4
PSO407G0035 Papaver somniferum HOM05D005421 ORTHO05D007601 5.1e-06 54.7 30 86.7
FAN05G0688 Fragaria x ananassa HOM05D005421 ORTHO05D007601 6.7e-06 54.3 40 72.5
FAN09G4258 Fragaria x ananassa HOM05D000389 ORTHO05D000287 6.7e-06 54.3 40 72.5
Actinidia35540 Actinidia chinensis HOM05D005421 ORTHO05D007601 8.7e-06 53.9 28 89.3
CARHR135760 Cardamine hirsuta HOM05D005421 ORTHO05D007601 8.7e-06 53.9 30 80.0
Duzib150G0691 Durio zibethinus HOM05D005421 ORTHO05D007601 8.7e-06 53.9 41 68.3
MBI18_g04564_MAGBIO Magnolia biondii HOM05D005421 ORTHO05D007601 8.7e-06 53.9 41 68.3
Nn4g25707 Nelumbo nucifera HOM05D005421 ORTHO05D007601 8.7e-06 53.9 39 69.2
TAR636G1951 Trochodendron aralioides HOM05D005421 ORTHO05D007601 8.7e-06 53.9 41 68.3


User provided reference genes

Program Settings