Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g29135 Brassica carinata HOM05D002623 ORTHO05D002826 8.5e-41 169.9 83 100.0
A04p29980 Brassica napus HOM05D002623 ORTHO05D002826 6.5e-09 63.9 41 87.8
BraA04t18510Z Brassica rapa HOM05D002623 ORTHO05D002826 6.5e-09 63.9 41 87.8
BcaB02g09044 Brassica carinata HOM05D002623 ORTHO05D002826 2.5e-08 62.0 44 79.5
Carub.0004s2238 Capsella rubella HOM05D002623 ORTHO05D002826 1.2e-07 59.7 41 78.0
AL4G37890 Arabidopsis lyrata HOM05D002623 ORTHO05D002826 1.6e-07 59.3 43 79.1
AT2G40170 Arabidopsis thaliana HOM05D002623 ORTHO05D002826 1.6e-07 59.3 43 79.1
BcaC02g12131 Brassica carinata HOM05D002623 ORTHO05D002826 1.6e-07 59.3 43 79.1
A05p06260 Brassica napus HOM05D002623 ORTHO05D002826 1.6e-07 59.3 43 79.1
C04p07220 Brassica napus HOM05D002623 ORTHO05D002826 1.6e-07 59.3 43 79.1
BolC4t22347H Brassica oleracea HOM05D002623 ORTHO05D002826 1.6e-07 59.3 43 79.1
BraA05t19594Z Brassica rapa HOM05D002623 ORTHO05D002826 1.6e-07 59.3 43 79.1
CARHR135200 Cardamine hirsuta HOM05D002623 ORTHO05D002826 1.6e-07 59.3 43 79.1
Sp4g22520 Schrenkiella parvula HOM05D002623 ORTHO05D002826 2.7e-07 58.5 41 75.6
Aa31LG5G19410 Aethionema arabicum HOM05D002623 ORTHO05D002826 3.6e-07 58.2 43 76.7
Thhalv10017713m.g Eutrema salsugineum HOM05D002623 ORTHO05D002826 4.7e-07 57.8 43 76.7
BcaC01g05423 Brassica carinata HOM05D002623 ORTHO05D002826 1.4e-06 56.2 43 76.7
A03p22600 Brassica napus HOM05D002623 ORTHO05D002826 1.4e-06 56.2 43 76.7
C03p26790 Brassica napus HOM05D002623 ORTHO05D002826 1.4e-06 56.2 43 76.7
BolC3t15064H Brassica oleracea HOM05D002623 ORTHO05D002826 1.4e-06 56.2 43 76.7
BraA03t11486Z Brassica rapa HOM05D002623 ORTHO05D002826 1.4e-06 56.2 43 76.7
Carub.0033s0007 Capsella rubella HOM05D002623 ORTHO05D002826 1.8e-06 55.8 41 75.6
BcaB01g03562 Brassica carinata HOM05D002623 ORTHO05D002826 3.0e-06 55.1 43 74.4
BcaB01g03564 Brassica carinata HOM05D002623 ORTHO05D002826 3.0e-06 55.1 43 74.4
DCAR_024819 Daucus carota HOM05D002623 ORTHO05D002826 3.0e-06 55.1 41 70.7
Eucgr.J00194 Eucalyptus grandis HOM05D002623 ORTHO05D002826 8.8e-06 53.5 41 65.9
TPR.G14315 Trifolium pratense HOM05D002623 ORTHO05D002826 8.8e-06 53.5 41 65.9


User provided reference genes

Program Settings