Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g29116 Brassica carinata HOM05D006228 ORTHO05D007847 1.3e-188 662.9 331 100.0
C03p26500 Brassica napus HOM05D006228 ORTHO05D007847 3.6e-90 335.9 415 51.1
A03p22360 Brassica napus HOM05D006228 ORTHO05D007847 2.3e-89 333.2 434 49.8
Sp4g22220 Schrenkiella parvula HOM05D006228 ORTHO05D007847 3.9e-89 332.4 427 49.6
BolC3t15036H Brassica oleracea HOM05D006228 ORTHO05D007847 7.4e-88 328.2 416 50.5
BcaC01g05454 Brassica carinata HOM05D006228 ORTHO05D007847 1.7e-87 327.0 409 50.4
Thhalv10016686m.g Eutrema salsugineum HOM05D006228 ORTHO05D007847 2.8e-87 326.2 427 48.9
BraA03t11466Z Brassica rapa HOM05D006228 ORTHO05D007847 1.4e-86 323.9 418 49.8
BcaB01g03579 Brassica carinata HOM05D006228 ORTHO05D007847 1.8e-86 323.6 432 48.4
AT2G39910 Arabidopsis thaliana HOM05D006228 ORTHO05D007847 2.6e-85 319.7 420 48.6
AL4G37490 Arabidopsis lyrata HOM05D006228 ORTHO05D007847 2.2e-84 316.6 420 47.9
Carub.0004s2204 Capsella rubella HOM05D006228 ORTHO05D007847 3.6e-82 309.3 423 48.0
CARHR134830 Cardamine hirsuta HOM05D006228 ORTHO05D007847 1.2e-77 294.3 230 67.0
Aa31LG5G19710 Aethionema arabicum HOM05D006228 ORTHO05D007847 5.0e-76 288.9 443 44.2
THA.LOC104810050 Tarenaya hassleriana HOM05D006228 ORTHO05D007847 9.1e-70 268.1 425 41.4
GSVIVG01016380001 Vitis vinifera HOM05D006228 ORTHO05D007847 4.5e-61 239.2 435 37.0
COL.COLO4_25614 Corchorus olitorius HOM05D006228 ORTHO05D007847 7.2e-59 231.9 407 36.6
Gohir.D06G170400 Gossypium hirsutum HOM05D006228 ORTHO05D007847 4.7e-58 229.2 404 37.6
Gorai.010G199300 Gossypium raimondii HOM05D006228 ORTHO05D007847 4.7e-58 229.2 404 37.6
Thecc.10G027500 Theobroma cacao HOM05D006228 ORTHO05D007847 4.7e-58 229.2 420 37.6
Haze_17175 Corylus avellana HOM05D006228 ORTHO05D007847 6.1e-58 228.8 438 34.7
Gohir.A06G164900 Gossypium hirsutum HOM05D006228 ORTHO05D007847 1.4e-57 227.6 405 37.3
Potri.008G063500 Populus trichocarpa HOM05D006228 ORTHO05D007847 1.4e-57 227.6 358 38.8
Manes.10G018500 Manihot esculenta HOM05D006228 ORTHO05D007847 1.8e-57 227.3 432 35.9
AUR62022833 Chenopodium quinoa HOM05D006228 ORTHO05D007847 3.0e-57 226.5 329 41.3
ECA232G3403 Erigeron canadensis HOM05D006228 ORTHO05D007847 6.8e-57 225.3 397 37.0
TWI09G0225 Tripterygium wilfordii HOM05D006228 ORTHO05D007847 8.8e-57 224.9 427 35.1
Aqoxy1G00736 Aquilegia oxysepala HOM05D006228 ORTHO05D007847 2.0e-56 223.8 411 36.0
PSO384G3635 Papaver somniferum HOM05D006228 ORTHO05D007847 2.6e-56 223.4 412 35.7
Dinv34431 Davidia involucrata HOM05D006228 ORTHO05D007847 9.8e-56 221.5 436 35.6
TAR633G1830 Trochodendron aralioides HOM05D006228 ORTHO05D007847 2.2e-55 220.3 432 34.7
Aqoxy3G00589 Aquilegia oxysepala HOM05D006228 ORTHO05D007847 2.8e-55 219.9 348 37.6
FvH4_7g23870 Fragaria vesca HOM05D006228 ORTHO05D007847 4.9e-55 219.2 406 35.5
HanXRQChr09g0246891 Helianthus annuus HOM05D006228 ORTHO05D007847 6.3e-55 218.8 400 37.0
Duzib106G2031 Durio zibethinus HOM05D006228 ORTHO05D007847 8.3e-55 218.4 380 38.7
RcHm_v2.0_Chr1g0369221 Rosa chinensis HOM05D006228 ORTHO05D007847 2.4e-54 216.9 405 36.3
FAN06G4757 Fragaria x ananassa HOM05D006228 ORTHO05D007847 4.1e-54 216.1 404 35.6
Prupe.2G245100 Prunus persica HOM05D006228 ORTHO05D007847 5.4e-54 215.7 228 46.5
FAN01G0169 Fragaria x ananassa HOM05D006228 ORTHO05D007847 7.0e-54 215.3 404 35.4
Solyc06g009690.3 Solanum lycopersicum HOM05D006228 ORTHO05D007847 1.6e-53 214.2 240 45.4
Cc02_g06990 Coffea canephora HOM05D006228 ORTHO05D007847 2.7e-53 213.4 227 48.5
PSO585G0034 Papaver somniferum HOM05D006228 ORTHO05D007847 3.5e-53 213.0 229 46.7
FAN03G1418 Fragaria x ananassa HOM05D006228 ORTHO05D007847 4.5e-53 212.6 328 38.4
SGA_v2.0_scaffold2G01060 Striga asiatica HOM05D006228 ORTHO05D007847 4.5e-53 212.6 219 49.8
Actinidia13913 Actinidia chinensis HOM05D006228 ORTHO05D007847 5.9e-53 212.2 430 34.7
Sopen06g004350 Solanum pennellii HOM05D006228 ORTHO05D007847 5.9e-53 212.2 217 48.8
MBI14_g08147_MAGBIO Magnolia biondii HOM05D006228 ORTHO05D007847 1.0e-52 211.5 219 49.8
CSS0000174 Camellia sinensis var. sinensis HOM05D006228 ORTHO05D007847 1.3e-52 211.1 455 34.3
Hma1.2p1_0026F.1_g016930 Hydrangea macrophylla HOM05D006228 ORTHO05D007847 1.3e-52 211.1 225 49.8
AUR62012200 Chenopodium quinoa HOM05D006228 ORTHO05D007847 1.7e-52 210.7 329 39.8
CAN.G1280.21 Capsicum annuum HOM05D006228 ORTHO05D007847 2.9e-52 209.9 223 48.0
PGSC0003DMG400007303 Solanum tuberosum HOM05D006228 ORTHO05D007847 2.9e-52 209.9 223 47.5
ClCG11G010510 Citrullus lanatus HOM05D006228 ORTHO05D007847 3.8e-52 209.5 350 37.4
DCAR_011778 Daucus carota HOM05D006228 ORTHO05D007847 6.6e-52 208.8 378 37.8
Migut.F00709 Erythranthe guttata HOM05D006228 ORTHO05D007847 8.6e-52 208.4 227 49.3
Lj1A949T58 Lonicera japonica HOM05D006228 ORTHO05D007847 8.6e-52 208.4 236 46.6
Nn2g13585 Nelumbo nucifera HOM05D006228 ORTHO05D007847 8.6e-52 208.4 237 46.0
MD07G1212900 Malus domestica HOM05D006228 ORTHO05D007847 1.5e-51 207.6 346 36.7
CSS0026214 Camellia sinensis var. sinensis HOM05D006228 ORTHO05D007847 2.5e-51 206.8 430 34.4
CiPaw.01G295100 Carya illinoinensis HOM05D006228 ORTHO05D007847 5.6e-51 205.7 430 33.3
FAN10G3493 Fragaria x ananassa HOM05D006228 ORTHO05D007847 5.6e-51 205.7 377 36.1
Glyma.18G031000 Glycine max HOM05D006228 ORTHO05D007847 7.3e-51 205.3 331 38.4
Sc11g0007370 Simmondsia chinensis HOM05D006228 ORTHO05D007847 7.3e-51 205.3 368 35.6
CsaV3_5G008840 Cucumis sativus L. HOM05D006228 ORTHO05D007847 1.2e-50 204.5 341 38.1
Cfa005508 Carpinus fangiana HOM05D006228 ORTHO05D007847 2.1e-50 203.8 439 32.8
Oeu006660.1 Olea europaea HOM05D006228 ORTHO05D007847 2.1e-50 203.8 227 47.1
Rhsim09G0171700 Rhododendron simsii HOM05D006228 ORTHO05D007847 3.6e-50 203.0 250 44.0
Nitab4.5_0012179g0020 Nicotiana tabacum HOM05D006228 ORTHO05D007847 6.1e-50 202.2 243 44.4
EL10Ac2g04780 Beta vulgaris HOM05D006228 ORTHO05D007847 8.0e-50 201.8 228 47.4
Medtr3g070010 Medicago truncatula HOM05D006228 ORTHO05D007847 1.8e-49 200.7 422 33.9
VMungo1383G2528 Vigna mungo HOM05D006228 ORTHO05D007847 1.8e-49 200.7 347 36.9
Psat5g127520 Pisum sativum HOM05D006228 ORTHO05D007847 4.0e-49 199.5 225 46.2
Hund13827 Selenicereus undatus HOM05D006228 ORTHO05D007847 5.2e-49 199.1 213 48.8
Sed0002982 Sechium edule HOM05D006228 ORTHO05D007847 6.8e-49 198.7 222 47.7
Lalb_Chr18g0052781 Lupinus albus HOM05D006228 ORTHO05D007847 3.4e-48 196.4 224 46.0
Ciclev10031701m.g Citrus clementina HOM05D006228 ORTHO05D007847 4.4e-48 196.1 225 46.2
SHI03521 Sapria himalayana HOM05D006228 ORTHO05D007847 4.4e-48 196.1 215 48.4
SalBow5G2373 Salvia bowleyana HOM05D006228 ORTHO05D007847 1.7e-47 194.1 197 49.7
TPR.G29810 Trifolium pratense HOM05D006228 ORTHO05D007847 2.9e-47 193.4 225 45.3
Ca_17139_v3 Cicer arietinum L. HOM05D006228 ORTHO05D007847 4.9e-47 192.6 225 44.4
ATR0580G418 Amborella trichopoda HOM05D006228 ORTHO05D007847 6.4e-47 192.2 216 47.7
Atru.chr12.264 Acer truncatum HOM05D006228 ORTHO05D007847 4.1e-46 189.5 335 36.4
Lj6g0016911 Lotus japonicus HOM05D006228 ORTHO05D007847 2.0e-45 187.2 225 45.3
Zm00001eb226270 Zea mays HOM05D006228 ORTHO05D007847 2.7e-45 186.8 223 43.0
Sabra08G0046800 Salix brachista HOM05D006228 ORTHO05D007847 1.0e-44 184.9 434 32.7
Nitab4.5_0000278g0180 Nicotiana tabacum HOM05D006228 ORTHO05D007847 1.7e-44 184.1 225 44.0
Ah.16g103060 Amaranthus hybridus HOM05D006228 ORTHO05D007847 2.3e-44 183.7 230 43.5
arahy.Tifrunner.gnm1.ann1.H1F5T1 Arachis hypogaea HOM05D006228 ORTHO05D007847 5.0e-44 182.6 239 42.7
Os06g0694100 Oryza sativa ssp. japonica HOM05D006228 ORTHO05D007847 8.6e-44 181.8 223 43.0
Peaxi162Scf00401g00030 Petunia axillaris HOM05D006228 ORTHO05D007847 1.1e-43 181.4 223 43.9
PGR044G0451 Punica granatum HOM05D006228 ORTHO05D007847 7.3e-43 178.7 238 44.5
Lsat_1_v5_gn_9_63220 Lactuca sativa HOM05D006228 ORTHO05D007847 8.0e-42 175.3 233 43.8
Phvul.001G239600 Phaseolus vulgaris HOM05D006228 ORTHO05D007847 1.4e-41 174.5 223 43.9
unitig_747.g21715 Utricularia gibba HOM05D006228 ORTHO05D007847 8.9e-41 171.8 206 43.7
Eucgr.J00246 Eucalyptus grandis HOM05D006228 ORTHO05D007847 1.2e-40 171.4 225 43.1
MELO3C025144.2 Cucumis melo HOM05D006228 ORTHO05D007847 7.5e-40 168.7 216 43.5
vmacro10067 Vaccinium macrocarpon HOM05D006228 ORTHO05D007847 5.4e-38 162.5 297 37.7
BcaC02g07378 Brassica carinata HOM05D006228 ORTHO05D007847 1.2e-37 161.4 204 49.5
arahy.Tifrunner.gnm1.ann1.PGVU2S Arachis hypogaea HOM05D006228 ORTHO05D007847 4.3e-35 152.9 141 52.5
CDE05G2573 Ceratophyllum demersum HOM05D006228 ORTHO05D007847 5.6e-35 152.5 143 55.2
SEGI_03712 Sequoiadendron giganteum HOM05D006228 ORTHO05D007847 2.1e-34 150.6 220 35.9
FAN06G0021 Fragaria x ananassa HOM05D006228 ORTHO05D007847 4.4e-32 142.9 281 35.2
BolC4t28269H Brassica oleracea HOM05D006228 ORTHO05D007847 3.2e-30 136.7 165 48.5
Actinidia25353 Actinidia chinensis HOM05D006228 ORTHO05D007847 3.6e-26 123.2 134 49.3
Pp3c11_8050 Physcomitrium patens HOM05D006228 ORTHO05D007847 1.2e-24 118.2 187 35.3
SMO273G0042 Selaginella moellendorffii HOM05D006228 ORTHO05D007847 7.6e-24 115.5 157 40.1
Sed0008304 Sechium edule HOM05D006228 ORTHO05D007847 4.9e-23 112.8 172 39.0
Mapoly0014s0032 Marchantia polymorpha HOM05D006228 ORTHO05D007847 1.2e-21 108.2 174 33.9
QL08p062537 Quercus lobata HOM05D006228 ORTHO05D007847 1.2e-21 108.2 149 38.3
AagrBONN_evm.TU.Sc2ySwM_344.5121 Anthoceros agrestis HOM05D006228 ORTHO05D007847 1.3e-20 104.8 162 35.8
RcHm_v2.0_Chr2g0110551 Rosa chinensis HOM05D006228 ORTHO05D007847 4.3e-19 99.8 136 39.7
Actinidia00930 Actinidia chinensis HOM05D006228 ORTHO05D007847 2.4e-17 94.0 146 37.7
HPP92_018568 Vanilla planifolia HOM05D006228 ORTHO05D007847 2.9e-15 87.0 74 52.7
C04p67680 Brassica napus HOM05D006228 ORTHO05D007847 3.8e-15 86.7 151 38.4
HPP92_018569 Vanilla planifolia HOM05D006228 ORTHO05D007847 6.0e-13 79.3 146 34.2
Cpa.g.sc19.228 Carica papaya HOM05D006228 ORTHO05D007847 1.5e-11 74.7 410 24.1
RcHm_v2.0_Chr1g0339731 Rosa chinensis HOM05D006228 ORTHO05D007847 1.6e-10 71.2 125 36.8
arahy.Tifrunner.gnm1.ann1.DSNI2G Arachis hypogaea HOM05D002669 ORTHO05D003001 6.2e-10 69.3 87 41.4
SMO147G0063 Selaginella moellendorffii HOM05D006228 ORTHO05D007847 4.0e-09 66.6 157 31.8
arahy.Tifrunner.gnm1.ann1.YTZ5F3 Arachis hypogaea HOM05D006228 ORTHO05D007847 5.3e-09 66.2 51 56.9


User provided reference genes

Program Settings