Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g28959 Brassica carinata HOM05D003667 ORTHO05D004397 1.9e-57 225.7 120 100.0
Thhalv10017208m.g Eutrema salsugineum HOM05D003667 ORTHO05D004397 6.3e-37 157.5 226 49.1
Sp4g19200 Schrenkiella parvula HOM05D003667 ORTHO05D004397 1.4e-36 156.4 226 48.2
C04p11070 Brassica napus HOM05D003667 ORTHO05D004397 3.1e-36 155.2 226 48.2
BolC4t22755H Brassica oleracea HOM05D003667 ORTHO05D004397 3.1e-36 155.2 226 48.2
AL8G24670 Arabidopsis lyrata HOM05D003667 ORTHO05D004397 1.2e-35 153.3 220 48.6
BcaB02g09321 Brassica carinata HOM05D003667 ORTHO05D004397 1.5e-35 152.9 222 47.3
Carub.0008s1055 Capsella rubella HOM05D003667 ORTHO05D004397 5.9e-35 151.0 220 47.7
AL4G33130 Arabidopsis lyrata HOM05D003667 ORTHO05D004397 7.7e-35 150.6 225 47.1
AT2G36900 Arabidopsis thaliana HOM05D003667 ORTHO05D004397 7.7e-35 150.6 225 47.1
A05p08960 Brassica napus HOM05D003667 ORTHO05D004397 1.0e-34 150.2 226 46.5
BraA05t19858Z Brassica rapa HOM05D003667 ORTHO05D004397 1.0e-34 150.2 226 46.5
Carub.0004s1876 Capsella rubella HOM05D003667 ORTHO05D004397 1.0e-34 150.2 226 46.9
AT5G50440 Arabidopsis thaliana HOM05D003667 ORTHO05D004397 3.8e-34 148.3 220 47.3
CARHR257860 Cardamine hirsuta HOM05D003667 ORTHO05D004397 3.8e-34 148.3 220 47.3
CARHR131380 Cardamine hirsuta HOM05D003667 ORTHO05D004397 8.5e-34 147.1 226 45.6
Aa31LG6G14320 Aethionema arabicum HOM05D003667 ORTHO05D004397 5.5e-33 144.4 230 45.7
Gohir.A11G231200 Gossypium hirsutum HOM05D003667 ORTHO05D004397 7.4e-30 134.0 219 41.1
Gohir.D11G242600 Gossypium hirsutum HOM05D003667 ORTHO05D004397 7.4e-30 134.0 219 41.1
Gorai.007G256800 Gossypium raimondii HOM05D003667 ORTHO05D004397 9.7e-30 133.7 219 40.6
THA.LOC104823778 Tarenaya hassleriana HOM05D003667 ORTHO05D004397 2.2e-29 132.5 229 41.9
Thhalv10014611m.g Eutrema salsugineum HOM05D003667 ORTHO05D004397 2.8e-29 132.1 214 43.0
Duzib106G0749 Durio zibethinus HOM05D003667 ORTHO05D004397 6.3e-29 131.0 222 39.2
Ciclev10022078m.g Citrus clementina HOM05D003667 ORTHO05D004397 4.1e-28 128.3 229 38.9
Thecc.05G244000 Theobroma cacao HOM05D003667 ORTHO05D004397 4.1e-28 128.3 222 39.2
BcaC02g11814 Brassica carinata HOM05D003667 ORTHO05D004397 2.6e-27 125.6 75 84.0
Lj2A112G40 Lonicera japonica HOM05D003667 ORTHO05D004397 3.5e-27 125.2 227 39.2
Nitab4.5_0001701g0060 Nicotiana tabacum HOM05D003667 ORTHO05D004397 4.5e-27 124.8 162 46.9
COL.COLO4_28620 Corchorus olitorius HOM05D003667 ORTHO05D004397 5.9e-27 124.4 222 38.7
CsaV3_4G012110 Cucumis sativus L. HOM05D003667 ORTHO05D004397 7.7e-27 124.0 227 38.3
TWI38G1994 Tripterygium wilfordii HOM05D003667 ORTHO05D004397 7.7e-27 124.0 230 39.1
Sed0016620 Sechium edule HOM05D003667 ORTHO05D004397 1.0e-26 123.6 223 37.7
ClCG04G005470 Citrullus lanatus HOM05D003667 ORTHO05D004397 1.3e-26 123.2 228 37.3
Sed0010728 Sechium edule HOM05D003667 ORTHO05D004397 1.7e-26 122.9 228 38.2
Sopen07g024170 Solanum pennellii HOM05D003667 ORTHO05D004397 3.8e-26 121.7 233 36.5
TWI38G1198 Tripterygium wilfordii HOM05D003667 ORTHO05D004397 5.0e-26 121.3 227 38.8
MELO3C008823.2 Cucumis melo HOM05D003667 ORTHO05D004397 6.5e-26 120.9 227 37.9
MD02G1195300 Malus domestica HOM05D003667 ORTHO05D004397 1.1e-25 120.2 222 37.8
Solyc07g047720.3 Solanum lycopersicum HOM05D003667 ORTHO05D004397 1.1e-25 120.2 235 35.7
Manes.09G137700 Manihot esculenta HOM05D003667 ORTHO05D004397 2.5e-25 119.0 229 36.7
RcHm_v2.0_Chr5g0045181 Rosa chinensis HOM05D003667 ORTHO05D004397 5.5e-25 117.9 224 36.6
PGSC0003DMG400006127 Solanum tuberosum HOM05D003667 ORTHO05D004397 5.5e-25 117.9 242 34.7
FAN25G1089 Fragaria x ananassa HOM05D003667 ORTHO05D004397 2.7e-24 115.5 226 36.3
Atru.chr2.1481 Acer truncatum HOM05D003667 ORTHO05D004397 3.6e-24 115.2 225 36.4
ClCG02G007830 Citrullus lanatus HOM05D003667 ORTHO05D004397 1.8e-23 112.8 227 35.2
Potri.013G062900 Populus trichocarpa HOM05D003667 ORTHO05D004397 2.3e-23 112.5 217 35.9
GSVIVG01029952001 Vitis vinifera HOM05D003667 ORTHO05D004397 2.3e-23 112.5 219 36.5
Hma1.2p1_0106F.1_g051140 Hydrangea macrophylla HOM05D003667 ORTHO05D004397 3.0e-23 112.1 222 36.0
Sabra13G0056100 Salix brachista HOM05D003667 ORTHO05D004397 3.0e-23 112.1 221 36.2
DCAR_013483 Daucus carota HOM05D003667 ORTHO05D004397 4.0e-23 111.7 69 81.2
FvH4_3g25040 Fragaria vesca HOM05D003667 ORTHO05D004397 4.0e-23 111.7 224 35.3
FAN21G0540 Fragaria x ananassa HOM05D003667 ORTHO05D004397 5.2e-23 111.3 226 35.4
MBI17_g12494_MAGBIO Magnolia biondii HOM05D003667 ORTHO05D004397 5.2e-23 111.3 223 35.4
Nitab4.5_0001774g0040 Nicotiana tabacum HOM05D003667 ORTHO05D004397 5.2e-23 111.3 234 34.6
Oeu063104.1 Olea europaea HOM05D003667 ORTHO05D004397 5.2e-23 111.3 201 39.8
MSTRG.26557 Avicennia marina HOM05D003667 ORTHO05D004397 6.7e-23 110.9 229 34.9
Eucgr.K01520 Eucalyptus grandis HOM05D003667 ORTHO05D004397 6.7e-23 110.9 226 34.5
Cc03_g11050 Coffea canephora HOM05D003667 ORTHO05D004397 8.8e-23 110.5 224 36.2
MSTRG.10431 Avicennia marina HOM05D003667 ORTHO05D004397 2.0e-22 109.4 92 59.8
PGSC0003DMG400018832 Solanum tuberosum HOM05D003667 ORTHO05D004397 2.6e-22 109.0 240 35.8
CAN.G992.19 Capsicum annuum HOM05D003667 ORTHO05D004397 3.3e-22 108.6 234 33.8
Migut.L01870 Erythranthe guttata HOM05D003667 ORTHO05D004397 3.3e-22 108.6 238 35.3
PSO170G5262 Papaver somniferum HOM05D003667 ORTHO05D004397 4.4e-22 108.2 69 73.9
Oeu035461.1 Olea europaea HOM05D003667 ORTHO05D004397 5.7e-22 107.8 237 34.2
Lalb_Chr17g0348151 Lupinus albus HOM05D003667 ORTHO05D004397 9.7e-22 107.1 210 38.1
Nitab4.5_0001741g0020 Nicotiana tabacum HOM05D003667 ORTHO05D004397 9.7e-22 107.1 231 34.6
SGA_v2.0_scaffold392G50657 Striga asiatica HOM05D003667 ORTHO05D004397 9.7e-22 107.1 92 60.9
Cpa.g.sc28.13 Carica papaya HOM05D003667 ORTHO05D004397 1.3e-21 106.7 107 57.0
PSO541G6155 Papaver somniferum HOM05D003667 ORTHO05D004397 1.3e-21 106.7 75 66.7
PSO675G2224 Papaver somniferum HOM05D003667 ORTHO05D004397 1.3e-21 106.7 75 66.7
SGA_v2.0_scaffold41G15803 Striga asiatica HOM05D003667 ORTHO05D004397 1.3e-21 106.7 91 60.4
TAR623G0153 Trochodendron aralioides HOM05D003667 ORTHO05D004397 1.3e-21 106.7 224 34.8
PSO357G0141 Papaver somniferum HOM05D003667 ORTHO05D004397 2.2e-21 105.9 69 71.0
CSS0004374 Camellia sinensis var. sinensis HOM05D003667 ORTHO05D004397 2.8e-21 105.5 225 34.2
CSS0013214 Camellia sinensis var. sinensis HOM05D003667 ORTHO05D004397 2.8e-21 105.5 225 34.2
Peaxi162Scf00776g00027 Petunia axillaris HOM05D003667 ORTHO05D004397 2.8e-21 105.5 204 35.3
HPP92_027259 Vanilla planifolia HOM05D003667 ORTHO05D004397 2.8e-21 105.5 69 73.9
CANSAT78G1932 Cannabis sativa HOM05D003667 ORTHO05D004397 3.7e-21 105.1 221 33.5
Hund10761 Selenicereus undatus HOM05D003667 ORTHO05D004397 8.3e-21 104.0 222 34.7
Aqoxy1G00535 Aquilegia oxysepala HOM05D003667 ORTHO05D004397 1.1e-20 103.6 223 34.1
Nn6g34578 Nelumbo nucifera HOM05D003667 ORTHO05D004397 1.4e-20 103.2 75 64.0
HanXRQChr07g0197181 Helianthus annuus HOM05D003667 ORTHO05D004397 1.8e-20 102.8 68 72.1
Os03g0655200 Oryza sativa ssp. japonica HOM05D003667 ORTHO05D004397 2.4e-20 102.4 92 55.4
arahy.Tifrunner.gnm1.ann1.FV18MX Arachis hypogaea HOM05D003667 ORTHO05D004397 3.1e-20 102.1 214 35.5
Prupe.2G153200 Prunus persica HOM05D003667 ORTHO05D004397 3.1e-20 102.1 219 35.6
Lsat_1_v5_gn_6_31701 Lactuca sativa HOM05D003667 ORTHO05D004397 4.1e-20 101.7 228 33.8
SEGI_40073 Sequoiadendron giganteum HOM05D003667 ORTHO05D004397 4.1e-20 101.7 92 55.4
BolC4t28047H Brassica oleracea HOM05D003667 ORTHO05D004397 5.3e-20 101.3 53 94.3
Ca_13917_v3 Cicer arietinum L. HOM05D003667 ORTHO05D004397 5.3e-20 101.3 224 33.5
HanXRQChr14g0453611 Helianthus annuus HOM05D003667 ORTHO05D004397 5.3e-20 101.3 224 33.5
Rhsim13G0206500 Rhododendron simsii HOM05D003667 ORTHO05D004397 1.2e-19 100.1 226 34.5
arahy.Tifrunner.gnm1.ann1.7QGR70 Arachis hypogaea HOM05D003667 ORTHO05D004397 1.6e-19 99.8 214 35.5
BcaC02g10601 Brassica carinata HOM05D003667 ORTHO05D004397 1.6e-19 99.8 95 61.1
Phvul.006G027100 Phaseolus vulgaris HOM05D003667 ORTHO05D004397 1.6e-19 99.8 218 32.6
Medtr3g450200 Medicago truncatula HOM05D003667 ORTHO05D004397 2.0e-19 99.4 228 34.2
BraA04t18306Z Brassica rapa HOM05D003667 ORTHO05D004397 3.5e-19 98.6 52 92.3
Rhsim02G0195900 Rhododendron simsii HOM05D003667 ORTHO05D004397 3.5e-19 98.6 72 69.4
A04p28220 Brassica napus HOM05D003667 ORTHO05D004397 4.5e-19 98.2 53 92.5
C04p65580 Brassica napus HOM05D003667 ORTHO05D004397 4.5e-19 98.2 53 92.5
Lj2g0005685 Lotus japonicus HOM05D003667 ORTHO05D004397 5.9e-19 97.8 214 34.1
Mapoly0001s0234 Marchantia polymorpha HOM05D003667 ORTHO05D004397 5.9e-19 97.8 91 54.9
Actinidia06203 Actinidia chinensis HOM05D003667 ORTHO05D004397 7.7e-19 97.4 75 64.0
TPR.G8769 Trifolium pratense HOM05D003667 ORTHO05D004397 7.7e-19 97.4 219 34.7
FAN11G0144 Fragaria x ananassa HOM05D003667 ORTHO05D004397 1.0e-18 97.1 90 58.9
Nn7g37255 Nelumbo nucifera HOM05D003667 ORTHO05D004397 1.0e-18 97.1 74 66.2
unitig_578.g16057 Utricularia gibba HOM05D003667 ORTHO05D004397 1.3e-18 96.7 75 64.0
arahy.Tifrunner.gnm1.ann1.VNW58P Arachis hypogaea HOM05D003667 ORTHO05D004397 1.7e-18 96.3 211 34.6
Psat2g018160 Pisum sativum HOM05D003667 ORTHO05D004397 2.2e-18 95.9 219 34.2
Actinidia07960 Actinidia chinensis HOM05D003667 ORTHO05D004397 2.9e-18 95.5 75 64.0
unitig_8.g4943 Utricularia gibba HOM05D003667 ORTHO05D004397 2.9e-18 95.5 238 32.4
C04p25660 Brassica napus HOM05D003667 ORTHO05D004397 5.0e-18 94.7 120 53.3
C05p50890 Brassica napus HOM05D003667 ORTHO05D004397 5.0e-18 94.7 120 53.3
CDE10G1021 Ceratophyllum demersum HOM05D003667 ORTHO05D004397 5.0e-18 94.7 216 31.9
Glyma.18G114700 Glycine max HOM05D003667 ORTHO05D004397 5.0e-18 94.7 218 32.6
Psat5g209680 Pisum sativum HOM05D003667 ORTHO05D004397 6.5e-18 94.4 225 32.9
MBI05_g12099_MAGBIO Magnolia biondii HOM05D003667 ORTHO05D004397 8.5e-18 94.0 208 33.2
Zm00001eb052810 Zea mays HOM05D003667 ORTHO05D004397 8.5e-18 94.0 230 32.6
Haze_14026 Corylus avellana HOM05D003667 ORTHO05D004397 1.5e-17 93.2 218 33.9
CiPaw.03G011100 Carya illinoinensis HOM05D003667 ORTHO05D004397 1.9e-17 92.8 219 33.3
Medtr5g090520 Medicago truncatula HOM05D003667 ORTHO05D004397 1.9e-17 92.8 218 33.0
SMO358G0442 Selaginella moellendorffii HOM05D003667 ORTHO05D004397 5.5e-17 91.3 80 60.0
VMungo0540G2144 Vigna mungo HOM05D003667 ORTHO05D004397 7.2e-17 90.9 212 32.1
Glyma.08G304700 Glycine max HOM05D003667 ORTHO05D004397 1.2e-16 90.1 65 67.7
Ca_06238_v3 Cicer arietinum L. HOM05D003667 ORTHO05D004397 1.6e-16 89.7 92 54.3
Pp3c7_13000 Physcomitrium patens HOM05D003667 ORTHO05D004397 1.6e-16 89.7 75 58.7
AUR62008662 Chenopodium quinoa HOM05D003667 ORTHO05D004397 2.7e-16 89.0 223 33.2
Lsat_1_v5_gn_2_103600 Lactuca sativa HOM05D003667 ORTHO05D004397 2.7e-16 89.0 221 31.2
Prupe.7G022400 Prunus persica HOM05D003667 ORTHO05D004397 2.7e-16 89.0 66 72.7
FAN16G1288 Fragaria x ananassa HOM05D003667 ORTHO05D004397 6.1e-16 87.8 58 75.9
Lalb_Chr10g0106501 Lupinus albus HOM05D003667 ORTHO05D004397 6.1e-16 87.8 89 51.7
TPR.G14738 Trifolium pratense HOM05D003667 ORTHO05D004397 1.0e-15 87.0 68 64.7
Cfa017699 Carpinus fangiana HOM05D003667 ORTHO05D004397 1.4e-15 86.7 56 69.6
CiPaw.04G007600 Carya illinoinensis HOM05D003667 ORTHO05D004397 2.3e-15 85.9 67 65.7
EL10Ac7g17477 Beta vulgaris HOM05D003667 ORTHO05D004397 4.0e-15 85.1 227 32.2
Haze_20440 Corylus avellana HOM05D003667 ORTHO05D004397 5.2e-15 84.7 57 70.2
arahy.Tifrunner.gnm1.ann1.B982CP Arachis hypogaea HOM05D003667 ORTHO05D004397 8.8e-15 84.0 195 32.8
Glyma.02G282800 Glycine max HOM05D003667 ORTHO05D004397 8.8e-15 84.0 118 50.0
BNapus_Darmor_BZH_scaffold_271p00010 Brassica napus HOM05D003667 ORTHO05D004397 1.2e-14 83.6 112 50.9
Pp3c11_11980 Physcomitrium patens HOM05D003667 ORTHO05D004397 2.6e-14 82.4 75 54.7
Lj6g0022641 Lotus japonicus HOM05D003667 ORTHO05D004397 9.8e-14 80.5 59 66.1
AUR62033107 Chenopodium quinoa HOM05D003667 ORTHO05D004397 1.7e-13 79.7 50 80.0
Solyc05g040100.4 Solanum lycopersicum HOM05D003667 ORTHO05D004397 3.7e-13 78.6 81 53.1
TPR.G36075 Trifolium pratense HOM05D003667 ORTHO05D004397 4.8e-13 78.2 53 71.7
CBR_g20321 Chara braunii HOM05D003667 ORTHO05D004397 1.1e-12 77.0 69 58.0
CDE10G1036 Ceratophyllum demersum HOM05D003667 ORTHO05D004397 1.8e-12 76.3 216 29.2
Cre12.g554200 Chlamydomonas reinhardtii HOM05D003667 ORTHO05D004397 1.7e-10 69.7 85 48.2
ECA238G3478 Erigeron canadensis HOM05D003667 ORTHO05D004397 2.8e-08 62.4 38 73.7
CSS0038188 Camellia sinensis var. sinensis HOM05D003667 ORTHO05D004397 3.6e-08 62.0 75 49.3
MCO05G601 Micromonas commoda HOM05D003667 ORTHO05D004397 6.1e-08 61.2 70 47.1
Sc01g0006150 Simmondsia chinensis HOM05D003667 ORTHO05D004397 6.1e-08 61.2 84 46.4
PRCOL_00002098 Prasinoderma coloniale HOM05D003667 ORTHO05D004397 8.0e-08 60.8 74 43.2
Dinv25059 Davidia involucrata HOM05D003667 ORTHO05D004397 2.3e-07 59.3 115 35.7
Actinidia03933 Actinidia chinensis HOM05D003667 ORTHO05D004397 8.9e-07 57.4 54 53.7
Dinv05568 Davidia involucrata HOM05D003667 ORTHO05D004397 3.4e-06 55.5 84 41.7
Ah.02g128310 Amaranthus hybridus HOM05D003667 ORTHO05D004397 4.4e-06 55.1 117 33.3
Rhsim02G0194700 Rhododendron simsii HOM05D003667 ORTHO05D004397 7.5e-06 54.3 88 42.0
Rhsim02G0195800 Rhododendron simsii HOM05D003667 ORTHO05D004397 7.5e-06 54.3 88 42.0


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