Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g28916 Brassica carinata HOM05D000171 ORTHO05D000101 2.0e-55 218.8 106 100.0
BcaC02g07628 Brassica carinata HOM05D000171 ORTHO05D000101 3.6e-20 101.7 63 71.4
BolC4t27998H Brassica oleracea HOM05D000748 ORTHO05D000101 3.6e-20 101.7 63 71.4
AL7G33990 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 8.9e-19 97.1 63 63.5
BraA04t17669Z Brassica rapa HOM05D000171 ORTHO05D000101 1.7e-17 92.8 59 71.2
CARHR226260 Cardamine hirsuta HOM05D000171 ORTHO05D000101 2.1e-15 85.9 63 55.6
CARHR226700 Cardamine hirsuta HOM05D000171 ORTHO05D000101 2.1e-15 85.9 63 55.6
Carub.0007s2124 Capsella rubella HOM05D000171 ORTHO05D000101 2.7e-15 85.5 63 52.4
Thhalv10025237m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.3e-14 83.2 68 55.9
BcaNung02553 Brassica carinata HOM05D000171 ORTHO05D000101 2.5e-13 79.0 69 52.2
Carub.0003s2519 Capsella rubella HOM05D000171 ORTHO05D000101 1.2e-12 76.6 75 49.3
BcaNung02552 Brassica carinata HOM05D000171 ORTHO05D000101 3.6e-12 75.1 68 51.5
BolC4t27210H Brassica oleracea HOM05D000171 ORTHO05D000101 3.6e-12 75.1 44 72.7
Carub.0004s2322 Capsella rubella HOM05D000171 ORTHO05D000101 4.7e-12 74.7 63 47.6
Carub.0007s2126 Capsella rubella HOM05D000171 ORTHO05D000101 4.7e-12 74.7 64 46.9
CARHR210940 Cardamine hirsuta HOM05D000171 ORTHO05D000101 8.1e-12 73.9 63 44.4
AL4G38860 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.1e-11 73.6 63 44.4
BcaC06g30637 Brassica carinata HOM05D000171 ORTHO05D000101 1.1e-11 73.6 68 50.0
BolC7t45568H Brassica oleracea HOM05D000171 ORTHO05D000101 1.1e-11 73.6 68 50.0
BolC7t45552H Brassica oleracea HOM05D000171 ORTHO05D000101 1.4e-11 73.2 66 53.0
Carub.0001s4456 Capsella rubella HOM05D000171 ORTHO05D000101 1.4e-11 73.2 63 44.4
BcaC01g00644 Brassica carinata HOM05D000171 ORTHO05D000101 1.8e-11 72.8 59 52.5
BolC3t20543H Brassica oleracea HOM05D000171 ORTHO05D000101 1.8e-11 72.8 59 52.5
AT4G19940 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 4.0e-11 71.6 64 48.4
AT2G40920 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 5.2e-11 71.2 63 42.9
AT4G19930 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 6.8e-11 70.9 75 44.0
Carub.0007s2125 Capsella rubella HOM05D000171 ORTHO05D000101 6.8e-11 70.9 63 49.2
Sp1g09440 Schrenkiella parvula HOM05D000171 ORTHO05D000101 2.6e-10 68.9 79 35.4
AL8G39600 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 5.8e-10 67.8 64 48.4
BraA03t14292Z Brassica rapa HOM05D000171 ORTHO05D000101 1.3e-09 66.6 86 38.4
Carub.0005s0876 Capsella rubella HOM05D000171 ORTHO05D000101 1.3e-09 66.6 64 40.6
AL1G54860 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.7e-09 66.2 63 36.5
BcaB03g11651 Brassica carinata HOM05D000171 ORTHO05D000101 1.7e-09 66.2 59 49.2
BolC7t45551H Brassica oleracea HOM05D000171 ORTHO05D000101 2.9e-09 65.5 69 43.5
Thhalv10016561m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 2.9e-09 65.5 63 42.9
BcaB03g11646 Brassica carinata HOM05D000171 ORTHO05D000101 3.8e-09 65.1 68 47.1
AL4G31270 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 4.9e-09 64.7 64 40.6
BolC2t09183H Brassica oleracea HOM05D000171 ORTHO05D000101 4.9e-09 64.7 89 32.6
Thhalv10011525m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 4.9e-09 64.7 64 37.5
Thhalv10012025m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 4.9e-09 64.7 64 37.5
C03p27380 Brassica napus HOM05D000171 ORTHO05D000101 6.4e-09 64.3 64 40.6
C07p50610 Brassica napus HOM05D000171 ORTHO05D000101 6.4e-09 64.3 86 37.2
BolC3t15119H Brassica oleracea HOM05D000171 ORTHO05D000101 6.4e-09 64.3 64 40.6
C03p27370 Brassica napus HOM05D000171 ORTHO05D000101 8.4e-09 63.9 63 38.1
BolC3t15117H Brassica oleracea HOM05D000171 ORTHO05D000101 8.4e-09 63.9 63 38.1
BraA02t06948Z Brassica rapa HOM05D000171 ORTHO05D000101 8.4e-09 63.9 89 32.6
BcaC03g15472 Brassica carinata HOM05D000171 ORTHO05D000101 1.1e-08 63.5 63 39.7
Carub.0004s2438 Capsella rubella HOM05D000171 ORTHO05D000101 1.1e-08 63.5 63 38.1
Thhalv10005397m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.1e-08 63.5 63 38.1
Sp1g05850 Schrenkiella parvula HOM05D000171 ORTHO05D000101 1.4e-08 63.2 63 41.3
A02p19000 Brassica napus HOM05D000171 ORTHO05D000101 1.9e-08 62.8 63 38.1
C02p31520 Brassica napus HOM05D000171 ORTHO05D000101 1.9e-08 62.8 63 38.1
BcaB03g11650 Brassica carinata HOM05D000171 ORTHO05D000101 2.4e-08 62.4 68 47.1
BcaC01g05368 Brassica carinata HOM05D000171 ORTHO05D000101 2.4e-08 62.4 63 39.7
Carub.0003s3064 Capsella rubella HOM05D000171 ORTHO05D000101 2.4e-08 62.4 79 35.4
Sp4g23370 Schrenkiella parvula HOM05D000171 ORTHO05D000101 2.4e-08 62.4 71 39.4
BcaB01g03500 Brassica carinata HOM05D000171 ORTHO05D000101 3.2e-08 62.0 63 36.5
AT5G62660 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 4.1e-08 61.6 64 42.2
A02p18970 Brassica napus HOM05D000171 ORTHO05D000101 5.4e-08 61.2 66 36.4
BcaNung03484 Brassica carinata HOM05D000171 ORTHO05D000101 7.1e-08 60.8 63 44.4
AL8G39400 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 9.2e-08 60.5 64 40.6
AT2G40925 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 9.2e-08 60.5 64 42.2
BraA02t06939Z Brassica rapa HOM05D000171 ORTHO05D000101 9.2e-08 60.5 63 36.5
BcaB01g03499 Brassica carinata HOM05D000171 ORTHO05D000101 1.2e-07 60.1 63 36.5
BcaB01g03501 Brassica carinata HOM05D000171 ORTHO05D000101 1.2e-07 60.1 63 38.1
BcaB03g13266 Brassica carinata HOM05D000171 ORTHO05D000101 1.2e-07 60.1 63 38.1
BcaC07g38647 Brassica carinata HOM05D000171 ORTHO05D000101 1.2e-07 60.1 63 38.1
C08p14200 Brassica napus HOM05D000171 ORTHO05D000101 1.2e-07 60.1 63 38.1
BolC8t49058H Brassica oleracea HOM05D000171 ORTHO05D000101 1.2e-07 60.1 63 38.1
BcaB03g13267 Brassica carinata HOM05D000171 ORTHO05D000101 1.6e-07 59.7 63 36.5
BcaC07g38624 Brassica carinata HOM05D000171 ORTHO05D000101 1.6e-07 59.7 63 34.9
A08p00330 Brassica napus HOM05D000171 ORTHO05D000101 2.1e-07 59.3 72 30.6
BcaC07g40198 Brassica carinata HOM05D000171 ORTHO05D000101 2.7e-07 58.9 86 36.0
C03p93170 Brassica napus HOM05D000171 ORTHO05D000101 2.7e-07 58.9 72 31.9
BolC7t45564H Brassica oleracea HOM05D000171 ORTHO05D000101 2.7e-07 58.9 93 33.3
Carub.0003s3063 Capsella rubella HOM05D000171 ORTHO05D000101 3.5e-07 58.5 65 38.5
CARHR182090 Cardamine hirsuta HOM05D000171 ORTHO05D000101 3.5e-07 58.5 60 38.3
BraA08t35273Z Brassica rapa HOM05D000171 ORTHO05D000101 4.6e-07 58.2 63 36.5
CARHR136020 Cardamine hirsuta HOM05D000171 ORTHO05D000101 6.0e-07 57.8 63 36.5
A03p23050 Brassica napus HOM05D000171 ORTHO05D000101 7.8e-07 57.4 63 34.9
BraA03t11528Z Brassica rapa HOM05D000171 ORTHO05D000101 7.8e-07 57.4 63 34.9
BraA03t14296Z Brassica rapa HOM05D000171 ORTHO05D000101 7.8e-07 57.4 86 33.7
BraA08t32091Z Brassica rapa HOM05D000171 ORTHO05D000101 7.8e-07 57.4 72 30.6
AL4G38870 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.0e-06 57.0 63 38.1
A08p33570 Brassica napus HOM05D000171 ORTHO05D000101 1.3e-06 56.6 63 36.5
A02p18980 Brassica napus HOM05D000171 ORTHO05D000101 1.7e-06 56.2 63 34.9
BolC8t49012H Brassica oleracea HOM05D000171 ORTHO05D000101 1.7e-06 56.2 60 40.0
BcaC01g05366 Brassica carinata HOM05D000171 ORTHO05D000101 2.3e-06 55.8 62 32.3
BcaC07g40197 Brassica carinata HOM05D000171 ORTHO05D000101 2.3e-06 55.8 86 33.7
Carub.0008s2317 Capsella rubella HOM05D000171 ORTHO05D000101 3.0e-06 55.5 64 42.2
C03p27440 Brassica napus HOM05D000171 ORTHO05D000101 3.9e-06 55.1 62 32.3
BolC3t15121H Brassica oleracea HOM05D000171 ORTHO05D000101 3.9e-06 55.1 62 32.3
Thhalv10005275m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 3.9e-06 55.1 67 37.3
BcaC08g43649 Brassica carinata HOM05D000171 ORTHO05D000101 5.1e-06 54.7 66 36.4
C02p62250 Brassica napus HOM05D004904 ORTHO05D000101 5.1e-06 54.7 79 38.0
C06p10670 Brassica napus HOM05D000171 ORTHO05D000101 5.1e-06 54.7 66 36.4
BolC6t36149H Brassica oleracea HOM05D000171 ORTHO05D000101 5.1e-06 54.7 66 36.4
BcaB06g26495 Brassica carinata HOM05D000171 ORTHO05D000101 6.6e-06 54.3 63 31.7
AT2G40910 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 8.6e-06 53.9 64 34.4
BcaC04g19915 Brassica carinata HOM05D000171 ORTHO05D000101 8.6e-06 53.9 62 33.9
BcaC04g20172 Brassica carinata HOM05D000171 ORTHO05D000101 8.6e-06 53.9 62 33.9
BraA10t43382Z Brassica rapa HOM05D000171 ORTHO05D000101 8.6e-06 53.9 62 33.9


User provided reference genes

Program Settings