Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g28824 Brassica carinata HOM05D002102 ORTHO05D004119 1.4e-44 182.6 91 100.0
BcaB06g28821 Brassica carinata HOM05D002102 ORTHO05D004119 1.8e-44 182.2 90 100.0
BcaC02g07749 Brassica carinata HOM05D002102 ORTHO05D004119 5.8e-35 150.6 90 84.4
BolC4t27882H Brassica oleracea HOM05D002102 ORTHO05D004119 5.8e-35 150.6 90 84.4
BraA04t18169Z Brassica rapa HOM05D002102 ORTHO05D004119 1.3e-34 149.4 90 82.2
A04p26640 Brassica napus HOM05D002102 ORTHO05D004119 6.4e-34 147.1 90 81.1
C04p64060 Brassica napus HOM05D002102 ORTHO05D004119 7.1e-33 143.7 90 80.0
BcaB06g28826 Brassica carinata HOM05D002102 ORTHO05D004119 1.6e-32 142.5 84 84.5
BcaC02g11574 Brassica carinata HOM05D002102 ORTHO05D004119 4.3e-30 134.4 104 71.2
C04p13880 Brassica napus HOM05D002102 ORTHO05D004119 4.3e-30 134.4 104 71.2
BolC4t22976H Brassica oleracea HOM05D002102 ORTHO05D004119 4.3e-30 134.4 104 71.2
Thhalv10017016m.g Eutrema salsugineum HOM05D002102 ORTHO05D004119 5.6e-30 134.0 102 70.6
Sp4g17210 Schrenkiella parvula HOM05D002102 ORTHO05D004119 7.4e-30 133.7 105 66.7
BcaB02g09499 Brassica carinata HOM05D002102 ORTHO05D004119 6.2e-29 130.6 106 68.9
A03p19350 Brassica napus HOM05D002102 ORTHO05D004119 8.2e-29 130.2 102 69.6
CARHR129060 Cardamine hirsuta HOM05D002102 ORTHO05D004119 2.4e-28 128.6 101 69.3
BraA03t11191Z Brassica rapa HOM05D002102 ORTHO05D004119 4.0e-28 127.9 102 68.6
AT2G34910 Arabidopsis thaliana HOM05D002102 ORTHO05D004119 5.3e-28 127.5 101 72.3
BcaC01g05749 Brassica carinata HOM05D002102 ORTHO05D004119 1.2e-27 126.3 101 68.3
C03p22600 Brassica napus HOM05D002102 ORTHO05D004119 1.2e-27 126.3 101 68.3
AL4G30920 Arabidopsis lyrata HOM05D002102 ORTHO05D004119 2.0e-27 125.6 101 71.3
BolC3t14657H Brassica oleracea HOM05D002102 ORTHO05D004119 2.0e-27 125.6 101 68.3
Carub.0004s1659 Capsella rubella HOM05D002102 ORTHO05D004119 2.0e-27 125.6 103 70.9
A05p10770 Brassica napus HOM05D002102 ORTHO05D004119 3.4e-27 124.8 104 67.3
BraA05t20021Z Brassica rapa HOM05D002102 ORTHO05D004119 3.4e-27 124.8 104 67.3
Aa31LG10G6430 Aethionema arabicum HOM05D002102 ORTHO05D004119 2.3e-23 112.1 103 61.2
Aa31LG6G12270 Aethionema arabicum HOM05D002102 ORTHO05D004119 3.4e-19 98.2 97 56.7
Sp1g26750 Schrenkiella parvula HOM05D002102 ORTHO05D004119 5.9e-19 97.4 101 59.4
THA.LOC104798573 Tarenaya hassleriana HOM05D002102 ORTHO05D004119 1.3e-18 96.3 97 57.7
Carub.0001s2919 Capsella rubella HOM05D002102 ORTHO05D004119 2.2e-18 95.5 100 56.0
AT1G30850 Arabidopsis thaliana HOM05D002102 ORTHO05D004119 5.0e-18 94.4 100 54.0
Thhalv10008294m.g Eutrema salsugineum HOM05D002102 ORTHO05D004119 5.0e-18 94.4 100 56.0
BcaB03g13811 Brassica carinata HOM05D002102 ORTHO05D004119 4.2e-17 91.3 100 56.0
AL1G45140 Arabidopsis lyrata HOM05D002102 ORTHO05D004119 5.5e-17 90.9 100 54.0
A08p10980 Brassica napus HOM05D002102 ORTHO05D004119 7.2e-17 90.5 96 55.2
CARHR030340 Cardamine hirsuta HOM05D002102 ORTHO05D004119 9.3e-17 90.1 101 54.5
A07p09590 Brassica napus HOM05D002102 ORTHO05D004119 2.7e-16 88.6 100 55.0
BraA07t28753Z Brassica rapa HOM05D002102 ORTHO05D004119 2.7e-16 88.6 100 55.0
BcaB04g18204 Brassica carinata HOM05D002102 ORTHO05D004119 4.6e-16 87.8 96 54.2
BcaC07g37800 Brassica carinata HOM05D002102 ORTHO05D004119 4.6e-16 87.8 96 55.2
BolC7t41979H Brassica oleracea HOM05D002102 ORTHO05D004119 4.6e-16 87.8 102 57.8
BolC8t48191H Brassica oleracea HOM05D002102 ORTHO05D004119 4.6e-16 87.8 96 55.2
C07p14770 Brassica napus HOM05D002102 ORTHO05D004119 1.8e-15 85.9 102 56.9
BraA08t33092Z Brassica rapa HOM05D002102 ORTHO05D004119 1.8e-15 85.9 96 55.2
BcaC05g27123 Brassica carinata HOM05D002102 ORTHO05D004119 3.9e-15 84.7 100 51.0
C05p30080 Brassica napus HOM05D002102 ORTHO05D004119 3.9e-15 84.7 100 51.0
BolC5t31744H Brassica oleracea HOM05D002102 ORTHO05D004119 3.9e-15 84.7 100 51.0
BcaB07g32751 Brassica carinata HOM05D002102 ORTHO05D004119 5.1e-15 84.3 102 50.0
A09p35310 Brassica napus HOM05D002102 ORTHO05D004119 6.7e-15 84.0 100 50.0
BraA09t39060Z Brassica rapa HOM05D002102 ORTHO05D004119 6.7e-15 84.0 100 50.0
THA.LOC104814329 Tarenaya hassleriana HOM05D002102 ORTHO05D004119 1.1e-14 83.2 99 53.5


User provided reference genes

Program Settings