Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g28692 Brassica carinata HOM05D002076 ORTHO05D002087 5.3e-81 304.3 154 100.0
BcaC02g07798 Brassica carinata HOM05D002076 ORTHO05D002087 6.0e-32 141.4 94 88.3
BolC4t27779H Brassica oleracea HOM05D002076 ORTHO05D002087 1.5e-30 136.7 95 87.4
C04p63020 Brassica napus HOM05D002076 ORTHO05D002087 7.3e-30 134.4 95 86.3
A04p25800 Brassica napus HOM05D002076 ORTHO05D002087 1.1e-28 130.6 99 83.8
BraA04t18083Z Brassica rapa HOM05D002076 ORTHO05D002087 1.1e-28 130.6 99 83.8
BcaB06g28693 Brassica carinata HOM05D002076 ORTHO05D002087 3.8e-26 122.1 97 76.3
BcaC02g11435 Brassica carinata HOM05D002076 ORTHO05D002087 6.4e-26 121.3 96 72.9
C04p15620 Brassica napus HOM05D002076 ORTHO05D002087 6.4e-26 121.3 96 72.9
BolC4t23130H Brassica oleracea HOM05D002076 ORTHO05D002087 6.4e-26 121.3 96 72.9
Sp4g15830 Schrenkiella parvula HOM05D002076 ORTHO05D002087 9.3e-25 117.5 95 71.6
BraA05t20146Z Brassica rapa HOM05D002076 ORTHO05D002087 6.0e-24 114.8 97 70.1
A05p12060 Brassica napus HOM05D002076 ORTHO05D002087 1.7e-23 113.2 97 69.1
CARHR127500 Cardamine hirsuta HOM05D002076 ORTHO05D002087 2.3e-23 112.8 120 59.2
BcaB02g10568 Brassica carinata HOM05D002076 ORTHO05D002087 9.6e-22 107.5 98 70.4
Carub.0004s1512 Capsella rubella HOM05D002076 ORTHO05D002087 2.8e-21 105.9 120 58.3
AT2G33490 Arabidopsis thaliana HOM05D002076 ORTHO05D002087 6.2e-21 104.8 120 56.7
AL4G29160 Arabidopsis lyrata HOM05D002076 ORTHO05D002087 1.4e-20 103.6 120 56.7
Thhalv10016385m.g Eutrema salsugineum HOM05D002076 ORTHO05D002087 2.7e-16 89.4 94 62.8
Aa31LG9G13420 Aethionema arabicum HOM05D002076 ORTHO05D002087 4.5e-11 72.0 103 54.4
BcaC02g07817 Brassica carinata HOM05D000171 ORTHO05D000101 7.1e-09 64.7 31 90.3
THA.LOC104812599 Tarenaya hassleriana HOM05D002076 ORTHO05D002087 2.1e-08 63.2 73 56.2
Atru.chr11.2399 Acer truncatum HOM05D002076 ORTHO05D002087 1.9e-06 56.6 74 45.9
THA.LOC104820529 Tarenaya hassleriana HOM05D002076 ORTHO05D002087 1.9e-06 56.6 71 52.1
Ciclev10030944m.g Citrus clementina HOM05D002076 ORTHO05D002087 9.6e-06 54.3 70 44.3


User provided reference genes

Program Settings