Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g28657 Brassica carinata HOM05D007635 ORTHO05D009612 1.1e-87 326.6 167 100.0
BcaC02g07856 Brassica carinata HOM05D007635 ORTHO05D009612 1.8e-82 309.3 167 94.6
BolC4t27744H Brassica oleracea HOM05D007635 ORTHO05D009612 1.8e-82 309.3 167 94.6
BraA04t18051Z Brassica rapa HOM05D007635 ORTHO05D009612 6.8e-82 307.4 167 94.6
A04p25480 Brassica napus HOM05D007635 ORTHO05D009612 4.4e-81 304.7 167 94.0
C04p62620 Brassica napus HOM05D007635 ORTHO05D009612 5.8e-81 304.3 167 92.8
Sp4g15480 Schrenkiella parvula HOM05D007635 ORTHO05D009612 1.7e-80 302.8 167 91.0
Thhalv10017331m.g Eutrema salsugineum HOM05D007635 ORTHO05D009612 3.6e-75 285.0 167 86.8
AL4G28740 Arabidopsis lyrata HOM05D007635 ORTHO05D009612 1.5e-68 263.1 167 83.2
AL569U10010 Arabidopsis lyrata HOM05D007635 ORTHO05D009612 1.5e-68 263.1 167 83.2
AT2G33180 Arabidopsis thaliana HOM05D007635 ORTHO05D009612 2.5e-68 262.3 167 81.4
Carub.0004s1461 Capsella rubella HOM05D007635 ORTHO05D009612 2.4e-66 255.8 167 79.6
CARHR127160 Cardamine hirsuta HOM05D007635 ORTHO05D009612 3.4e-65 251.9 167 79.0
Aa31LG5G4080 Aethionema arabicum HOM05D007635 ORTHO05D009612 2.4e-58 229.2 167 71.3
Gorai.011G162800 Gossypium raimondii HOM05D007635 ORTHO05D009612 8.2e-43 177.6 118 74.6
Eucgr.L01778 Eucalyptus grandis HOM05D007635 ORTHO05D009612 3.1e-42 175.6 175 57.7
Eucgr.K02034 Eucalyptus grandis HOM05D007635 ORTHO05D009612 5.3e-42 174.9 173 58.4
Duzib268G0659 Durio zibethinus HOM05D007635 ORTHO05D009612 6.9e-42 174.5 110 77.3
COL.COLO4_05721 Corchorus olitorius HOM05D001044 ORTHO05D007204 2.9e-40 169.1 118 72.9
QL07p037425 Quercus lobata HOM05D007635 ORTHO05D009612 1.9e-39 166.4 116 72.4
Potri.001G053700 Populus trichocarpa HOM05D007635 ORTHO05D009612 3.2e-39 165.6 131 65.6
PGR142G1826 Punica granatum HOM05D007635 ORTHO05D009612 3.2e-39 165.6 133 63.2
GSVIVG01030149001 Vitis vinifera HOM05D007635 ORTHO05D009612 2.7e-38 162.5 114 71.1
CANSAT64G1146 Cannabis sativa HOM05D007635 ORTHO05D009612 4.6e-38 161.8 109 75.2
Ciclev10006014m.g Citrus clementina HOM05D007635 ORTHO05D009612 3.9e-37 158.7 128 66.4
Cfa016671 Carpinus fangiana HOM05D003127 ORTHO05D003709 5.1e-37 158.3 129 65.9
Haze_19686 Corylus avellana HOM05D007635 ORTHO05D009612 5.1e-37 158.3 116 71.6
RcHm_v2.0_Chr3g0475481 Rosa chinensis HOM05D007635 ORTHO05D009612 6.7e-37 157.9 93 80.6
PGSC0003DMG400021288 Solanum tuberosum HOM05D007635 ORTHO05D009612 6.7e-37 157.9 157 58.0
unitig_26.g8994 Utricularia gibba HOM05D007635 ORTHO05D009612 6.7e-37 157.9 96 80.2
Sopen10g003580 Solanum pennellii HOM05D007635 ORTHO05D009612 8.8e-37 157.5 158 57.6
Ca_09045_v3 Cicer arietinum L. HOM05D007635 ORTHO05D009612 1.1e-36 157.1 94 78.7
TWI09G0209 Tripterygium wilfordii HOM05D007635 ORTHO05D009612 1.1e-36 157.1 171 54.4
Dinv26633 Davidia involucrata HOM05D007635 ORTHO05D009612 1.5e-36 156.8 96 77.1
Manes.15G049600 Manihot esculenta HOM05D007635 ORTHO05D009612 1.5e-36 156.8 97 78.4
CiPaw.09G019400 Carya illinoinensis HOM05D007635 ORTHO05D009612 1.9e-36 156.4 164 54.9
Nn1g07615 Nelumbo nucifera HOM05D007635 ORTHO05D009612 1.9e-36 156.4 96 79.2
Prupe.7G097800 Prunus persica HOM05D007635 ORTHO05D009612 1.9e-36 156.4 93 79.6
CAN.G904.10 Capsicum annuum HOM05D007635 ORTHO05D009612 2.5e-36 156.0 139 59.7
Peaxi162Scf00035g02213 Petunia axillaris HOM05D007635 ORTHO05D009612 2.5e-36 156.0 157 56.7
arahy.Tifrunner.gnm1.ann1.X3I9NV Arachis hypogaea HOM05D007635 ORTHO05D009612 3.3e-36 155.6 155 54.8
Ah.05g169970 Amaranthus hybridus HOM05D007635 ORTHO05D009612 4.3e-36 155.2 112 72.3
AUR62038521 Chenopodium quinoa HOM05D007635 ORTHO05D009612 4.3e-36 155.2 96 78.1
Nitab4.5_0000923g0190 Nicotiana tabacum HOM05D007635 ORTHO05D009612 4.3e-36 155.2 159 54.7
Os09g0481800 Oryza sativa ssp. japonica HOM05D007635 ORTHO05D009612 5.7e-36 154.8 92 81.5
Solyc10g007670.4 Solanum lycopersicum HOM05D007635 ORTHO05D009612 5.7e-36 154.8 137 62.0
Lalb_Chr20g0111441 Lupinus albus HOM05D007635 ORTHO05D009612 7.4e-36 154.5 94 77.7
Zm00001eb101710 Zea mays HOM05D007635 ORTHO05D009612 7.4e-36 154.5 92 81.5
TAR374G1245 Trochodendron aralioides HOM05D007635 ORTHO05D009612 9.7e-36 154.1 140 58.6
AUR62027757 Chenopodium quinoa HOM05D007635 ORTHO05D009612 1.3e-35 153.7 112 70.5
Phvul.001G194300 Phaseolus vulgaris HOM05D007635 ORTHO05D009612 1.7e-35 153.3 94 76.6
CsaV3_3G037770 Cucumis sativus L. HOM05D007635 ORTHO05D009612 2.2e-35 152.9 93 79.6
FAN02G0889 Fragaria x ananassa HOM05D007635 ORTHO05D009612 2.2e-35 152.9 93 78.5
FAN05G0948 Fragaria x ananassa HOM05D007635 ORTHO05D009612 2.2e-35 152.9 93 78.5
ClCG10G018500 Citrullus lanatus HOM05D003127 ORTHO05D003709 2.8e-35 152.5 117 68.4
VMungo1383G2560 Vigna mungo HOM05D007635 ORTHO05D009612 2.8e-35 152.5 94 76.6
FvH4_6g20030 Fragaria vesca HOM05D007635 ORTHO05D009612 4.8e-35 151.8 93 77.4
FAN09G2965 Fragaria x ananassa HOM05D007635 ORTHO05D009612 4.8e-35 151.8 93 77.4
FAN14G1263 Fragaria x ananassa HOM05D007635 ORTHO05D009612 4.8e-35 151.8 93 77.4
Glyma.19G198300 Glycine max HOM05D007635 ORTHO05D009612 4.8e-35 151.8 94 76.6
Lj1g0026019 Lotus japonicus HOM05D007635 ORTHO05D009612 4.8e-35 151.8 130 58.5
PSO541G5044 Papaver somniferum HOM05D007635 ORTHO05D009612 4.8e-35 151.8 93 75.3
PSO675G5663 Papaver somniferum HOM05D007635 ORTHO05D009612 4.8e-35 151.8 93 75.3
MSTRG.12845 Avicennia marina HOM05D007635 ORTHO05D009612 6.3e-35 151.4 116 66.4
CSS0021722 Camellia sinensis var. sinensis HOM05D007635 ORTHO05D009612 8.2e-35 151.0 96 75.0
CSS0041027 Camellia sinensis var. sinensis HOM05D007635 ORTHO05D009612 8.2e-35 151.0 96 75.0
Cc05_g09950 Coffea canephora HOM05D007635 ORTHO05D009612 8.2e-35 151.0 136 63.2
ATR0751G143 Amborella trichopoda HOM05D007635 ORTHO05D009612 1.4e-34 150.2 136 56.6
Medtr7g105840 Medicago truncatula HOM05D007635 ORTHO05D009612 1.4e-34 150.2 94 76.6
Psat3g030120 Pisum sativum HOM05D003127 ORTHO05D003709 3.1e-34 149.1 93 77.4
Actinidia12337 Actinidia chinensis HOM05D007635 ORTHO05D009612 4.1e-34 148.7 165 52.7
Glyma.03G200700 Glycine max HOM05D007635 ORTHO05D009612 5.3e-34 148.3 144 57.6
Lsat_1_v5_gn_7_99401 Lactuca sativa HOM05D007635 ORTHO05D009612 2.6e-33 146.0 161 49.7
TPR.G23321 Trifolium pratense HOM05D007635 ORTHO05D009612 2.6e-33 146.0 98 73.5
Sc26g0000090 Simmondsia chinensis HOM05D007635 ORTHO05D009612 1.0e-32 144.1 121 64.5
Rhsim06G0182000 Rhododendron simsii HOM05D007635 ORTHO05D009612 1.7e-32 143.3 100 71.0
Rhsim06G0183000 Rhododendron simsii HOM05D007635 ORTHO05D009612 1.7e-32 143.3 100 71.0
ECA236G3620 Erigeron canadensis HOM05D007635 ORTHO05D009612 5.0e-32 141.7 168 47.6
Pp3c11_15670 Physcomitrium patens HOM05D007635 ORTHO05D009612 6.5e-32 141.4 100 67.0
SGA_v2.0_scaffold130G34228 Striga asiatica HOM05D007635 ORTHO05D009612 6.5e-32 141.4 105 71.4
MBI15_g36010_MAGBIO Magnolia biondii HOM05D007635 ORTHO05D009612 8.5e-32 141.0 119 60.5
MBI15_g47427_MAGBIO Magnolia biondii HOM05D007635 ORTHO05D009612 8.5e-32 141.0 119 60.5
SEGI_23489 Sequoiadendron giganteum HOM05D007635 ORTHO05D009612 8.5e-32 141.0 125 60.8
CBR_g50773 Chara braunii HOM05D007635 ORTHO05D009612 7.2e-31 137.9 100 67.0
AagrBONN_evm.TU.Sc2ySwM_362.2476 Anthoceros agrestis HOM05D007635 ORTHO05D009612 7.9e-30 134.4 93 69.9
vmacro12032 Vaccinium macrocarpon HOM05D007635 ORTHO05D009612 2.3e-29 132.9 143 54.5
EL10Ac1g01217 Beta vulgaris HOM05D007635 ORTHO05D009612 5.7e-28 128.3 79 79.7
Atru.BG.99.p Acer truncatum HOM05D007635 ORTHO05D009612 7.4e-28 127.9 71 83.1
MD12G1037400 Malus domestica HOM05D007635 ORTHO05D009612 5.3e-26 121.7 92 65.2
Nitab4.5_0002209g0110 Nicotiana tabacum HOM05D007635 ORTHO05D009612 2.6e-25 119.4 138 51.4
Aqoxy2G03911 Aquilegia oxysepala HOM05D007635 ORTHO05D009612 1.3e-24 117.1 98 58.2
Cpa.g.sc59.77 Carica papaya HOM05D007635 ORTHO05D009612 2.9e-24 115.9 106 55.7
Sed0019283 Sechium edule HOM05D003127 ORTHO05D003709 9.4e-23 110.9 76 71.1
FAN05G1739 Fragaria x ananassa HOM05D007635 ORTHO05D009612 1.2e-22 110.5 62 80.6
HanXRQChr11g0329581 Helianthus annuus HOM05D007635 ORTHO05D009612 4.7e-22 108.6 64 76.6
MELO3C009519.2 Cucumis melo HOM05D003127 ORTHO05D003709 8.0e-22 107.8 63 79.4
Migut.H02083 Erythranthe guttata HOM05D007635 ORTHO05D009612 8.0e-22 107.8 134 47.0
Pp3c11_15610 Physcomitrium patens HOM05D007635 ORTHO05D009612 6.3e-19 98.2 62 71.0
HPP92_017857 Vanilla planifolia HOM05D007635 ORTHO05D009612 1.8e-18 96.7 63 68.3
Gohir.A10G120700 Gossypium hirsutum HOM05D007635 ORTHO05D009612 5.7e-12 75.1 57 64.9
Gohir.D10G145600 Gossypium hirsutum HOM05D007635 ORTHO05D009612 2.8e-11 72.8 57 63.2
Thecc.04G214500 Theobroma cacao HOM05D007635 ORTHO05D009612 6.3e-11 71.6 57 63.2


User provided reference genes

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