Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g28566 Brassica carinata HOM05D008462 ORTHO05D010511 1.3e-34 149.1 71 100.0
BcaC06g30603 Brassica carinata HOM05D008462 ORTHO05D010511 3.4e-30 134.4 71 93.0
BcaC06g30601 Brassica carinata HOM05D008462 ORTHO05D010511 1.4e-28 129.0 67 89.6
BolC7t45511H Brassica oleracea HOM05D008462 ORTHO05D010511 1.7e-26 122.1 69 84.1
BcaNung02684 Brassica carinata HOM05D008462 ORTHO05D010511 1.1e-25 119.4 69 81.2
C07p50070 Brassica napus HOM05D008462 ORTHO05D010511 1.1e-25 119.4 69 81.2
BraA03t14245Z Brassica rapa HOM05D008462 ORTHO05D010511 9.5e-25 116.3 69 78.3
BolC7t45509H Brassica oleracea HOM05D000817 ORTHO05D000702 9.8e-22 106.3 65 83.1
A07p07140 Brassica napus HOM05D008462 ORTHO05D010511 4.6e-19 97.4 73 71.2
BraA07t28500Z Brassica rapa HOM05D008462 ORTHO05D010511 4.6e-19 97.4 73 71.2
BcaC06g35797 Brassica carinata HOM05D008462 ORTHO05D010511 4.3e-17 90.9 73 67.1
C07p10750 Brassica napus HOM05D008462 ORTHO05D010511 4.3e-17 90.9 73 67.1
BolC7t41541H Brassica oleracea HOM05D008462 ORTHO05D010511 4.3e-17 90.9 73 67.1
Sp3g22770 Schrenkiella parvula HOM05D008462 ORTHO05D010511 1.4e-12 75.9 73 56.2
AT3G25170 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 1.9e-12 75.5 73 52.1
Thhalv10002753m.g Eutrema salsugineum HOM05D008462 ORTHO05D010511 5.4e-12 73.9 74 55.4
AL3G40860 Arabidopsis lyrata HOM05D008462 ORTHO05D010511 2.7e-11 71.6 73 50.7
AT3G25165 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 3.0e-10 68.2 69 47.8
AL3G52890 Arabidopsis lyrata HOM05D008462 ORTHO05D010511 8.6e-10 66.6 70 47.1
AT2G19030 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 1.1e-09 66.2 70 47.1
AT2G19045 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 1.1e-09 66.2 70 48.6
Sp3g32450 Schrenkiella parvula HOM05D008462 ORTHO05D010511 1.1e-09 66.2 70 42.9
AT2G19040 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 3.3e-09 64.7 70 47.1
CARHR101500 Cardamine hirsuta HOM05D008462 ORTHO05D010511 1.2e-08 62.8 69 46.4
C05p61610 Brassica napus HOM05D008462 ORTHO05D010511 1.6e-08 62.4 73 52.1
AL3G40850 Arabidopsis lyrata HOM05D008462 ORTHO05D010511 6.2e-08 60.5 72 45.8
Carub.0003s3328 Capsella rubella HOM05D008462 ORTHO05D010511 6.2e-08 60.5 70 42.9
CARHR101510 Cardamine hirsuta HOM05D008462 ORTHO05D010511 6.2e-08 60.5 72 48.6
AL3G52880 Arabidopsis lyrata HOM05D008462 ORTHO05D010511 1.1e-07 59.7 70 44.3
Carub.0003s3341 Capsella rubella HOM05D008462 ORTHO05D010511 1.1e-07 59.7 70 42.9
Aa31sc95G170 Aethionema arabicum HOM05D008462 ORTHO05D010511 1.8e-07 58.9 71 42.3
AT2G19020 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 1.8e-07 58.9 71 49.3
C07p01380 Brassica napus HOM05D008462 ORTHO05D010511 2.4e-07 58.5 80 51.2
BraA05t22955Z Brassica rapa HOM05D008462 ORTHO05D010511 2.4e-07 58.5 73 50.7
Thhalv10026849m.g Eutrema salsugineum HOM05D008462 ORTHO05D010511 5.2e-07 57.4 76 38.2
C05p61600 Brassica napus HOM05D008462 ORTHO05D010511 6.8e-07 57.0 80 50.0
C05p42410 Brassica napus HOM05D046735 ORTHO05D010511 1.2e-06 56.2 67 47.8
Carub.0003s2550 Capsella rubella HOM05D008462 ORTHO05D010511 4.4e-06 54.3 72 44.4
CARHR109540 Cardamine hirsuta HOM05D008462 ORTHO05D010511 4.4e-06 54.3 69 42.0
AL9U11140 Arabidopsis lyrata HOM05D008462 ORTHO05D010511 7.6e-06 53.5 72 40.3


User provided reference genes

Program Settings