Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g28560 Brassica carinata HOM05D006896 ORTHO05D007622 2.1e-94 349.4 169 100.0
A07p06970 Brassica napus HOM05D006896 ORTHO05D007622 2.6e-49 199.5 172 66.9
C07p10600 Brassica napus HOM05D006896 ORTHO05D007622 1.1e-47 194.1 178 64.6
BolC7t41525H Brassica oleracea HOM05D006896 ORTHO05D007622 4.2e-47 192.2 178 64.0
BraA07t28487Z Brassica rapa HOM05D006896 ORTHO05D007622 3.6e-46 189.1 165 66.1
BcaB05g23986 Brassica carinata HOM05D006896 ORTHO05D007622 6.1e-46 188.3 180 61.7
A02p24490 Brassica napus HOM05D006896 ORTHO05D007622 1.6e-41 173.7 167 60.5
C02p38670 Brassica napus HOM05D006896 ORTHO05D007622 1.6e-41 173.7 167 60.5
BolC2t09885H Brassica oleracea HOM05D006896 ORTHO05D007622 1.6e-41 173.7 167 60.5
BraA02t07439Z Brassica rapa HOM05D006896 ORTHO05D007622 1.6e-41 173.7 167 60.5
BcaC03g16098 Brassica carinata HOM05D006896 ORTHO05D007622 7.7e-41 171.4 167 59.9
BcaC06g35810 Brassica carinata HOM05D006896 ORTHO05D007622 2.3e-37 159.8 157 60.5
Thhalv10023695m.g Eutrema salsugineum HOM05D006896 ORTHO05D007622 6.3e-35 151.8 184 52.7
AL6G51750 Arabidopsis lyrata HOM05D006896 ORTHO05D007622 5.4e-34 148.7 177 51.4
Thhalv10028974m.g Eutrema salsugineum HOM05D006896 ORTHO05D007622 1.7e-32 143.7 171 52.0
Sp6g01500 Schrenkiella parvula HOM05D006896 ORTHO05D007622 2.8e-30 136.3 170 49.4
BcaB06g26744 Brassica carinata HOM05D006896 ORTHO05D007622 2.3e-29 133.3 177 50.3
Carub.0006s3560 Capsella rubella HOM05D006896 ORTHO05D007622 8.3e-27 124.8 175 45.1
Carub.0003s1963 Capsella rubella HOM05D006896 ORTHO05D007622 1.1e-26 124.4 152 48.0
THA.LOC104825918 Tarenaya hassleriana HOM05D006896 ORTHO05D007622 1.1e-26 124.4 153 45.1
Aa31LG5G1310 Aethionema arabicum HOM05D006896 ORTHO05D007622 5.4e-26 122.1 162 45.7
AT4G01590 Arabidopsis thaliana HOM05D006896 ORTHO05D007622 9.2e-26 121.3 168 46.4
CARHR250080 Cardamine hirsuta HOM05D006896 ORTHO05D007622 2.8e-22 109.8 161 41.6
AT4G35685 Arabidopsis thaliana HOM05D006896 ORTHO05D007622 6.2e-14 82.0 181 37.0
Thecc.01G002700 Theobroma cacao HOM05D006896 ORTHO05D007622 2.3e-13 80.1 149 36.9
Eucgr.F03083 Eucalyptus grandis HOM05D006896 ORTHO05D007622 3.4e-12 76.3 175 34.9
Gohir.A09G147400 Gossypium hirsutum HOM05D006896 ORTHO05D007622 7.5e-12 75.1 149 36.9
Gohir.D09G143000 Gossypium hirsutum HOM05D006896 ORTHO05D007622 1.3e-11 74.3 149 36.9
Gorai.006G164500 Gossypium raimondii HOM05D006896 ORTHO05D007622 1.3e-11 74.3 149 36.9
Ciclev10026494m.g Citrus clementina HOM05D006896 ORTHO05D007622 2.0e-09 67.0 150 31.3
Os07g0611600 Oryza sativa ssp. japonica HOM05D006896 ORTHO05D007622 3.5e-09 66.2 172 32.0
Cpa.g.sc25.137 Carica papaya HOM05D006896 ORTHO05D007622 4.6e-09 65.9 148 33.1
Ciclev10022257m.g Citrus clementina HOM05D006896 ORTHO05D007622 4.6e-09 65.9 146 34.9
TWI75G0052 Tripterygium wilfordii HOM05D006896 ORTHO05D007622 7.8e-09 65.1 173 33.5
Manes.04G135200 Manihot esculenta HOM05D006896 ORTHO05D007622 1.0e-08 64.7 146 31.5
CiPaw.04G076100 Carya illinoinensis HOM05D006896 ORTHO05D007622 3.9e-08 62.8 178 32.0
Zm00001eb122950 Zea mays HOM05D006896 ORTHO05D007622 8.6e-08 61.6 151 31.1
GSVIVG01016958001 Vitis vinifera HOM05D006896 ORTHO05D007622 1.1e-07 61.2 166 30.1
Potri.003G047600 Populus trichocarpa HOM05D006896 ORTHO05D007622 1.5e-07 60.8 146 34.2
CANSAT21G0002 Cannabis sativa HOM05D006896 ORTHO05D007622 2.5e-07 60.1 171 31.6
Cfa015335 Carpinus fangiana HOM05D006896 ORTHO05D007622 1.2e-06 57.8 160 33.8
MD08G1165000 Malus domestica HOM05D006896 ORTHO05D007622 1.6e-06 57.4 178 32.0
EL10Ac4g10121 Beta vulgaris HOM05D006896 ORTHO05D007622 2.8e-06 56.6 178 29.8
EL10Ac4g10168 Beta vulgaris HOM05D006896 ORTHO05D007622 2.8e-06 56.6 178 29.8
Ah.06g194440 Amaranthus hybridus HOM05D006896 ORTHO05D007622 4.7e-06 55.8 139 33.1
Haze_24358 Corylus avellana HOM05D006896 ORTHO05D007622 6.2e-06 55.5 183 32.8
Nitab4.5_0002546g0010 Nicotiana tabacum HOM05D006896 ORTHO05D007622 6.2e-06 55.5 179 26.8


User provided reference genes

Program Settings