Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g28488 Brassica carinata HOM05D008879 ORTHO05D010552 2.5e-37 158.3 82 100.0
C04p60330 Brassica napus HOM05D008879 ORTHO05D010552 2.5e-37 158.3 82 100.0
BolC4t27533H Brassica oleracea HOM05D008879 ORTHO05D010552 2.5e-37 158.3 82 100.0
A04p23850 Brassica napus HOM05D008879 ORTHO05D010552 1.4e-35 152.5 82 96.3
BraA04t17908Z Brassica rapa HOM05D008879 ORTHO05D010552 1.4e-35 152.5 82 96.3
BcaB06g28411 Brassica carinata HOM05D008879 ORTHO05D010552 2.0e-34 148.7 82 92.7
Thhalv10017588m.g Eutrema salsugineum HOM05D008879 ORTHO05D010552 8.4e-33 143.3 82 87.8
Sp4g13570 Schrenkiella parvula HOM05D008879 ORTHO05D010552 4.2e-32 141.0 82 87.8
BcaB01g04065 Brassica carinata HOM05D008879 ORTHO05D010552 5.1e-30 134.0 82 82.9
A05p14570 Brassica napus HOM05D008879 ORTHO05D010552 6.6e-30 133.7 81 81.5
BcaC01g05980 Brassica carinata HOM05D008879 ORTHO05D010552 8.7e-30 133.3 82 86.6
C03p20490 Brassica napus HOM05D008879 ORTHO05D010552 8.7e-30 133.3 82 86.6
BolC3t14429H Brassica oleracea HOM05D008879 ORTHO05D010552 8.7e-30 133.3 82 86.6
BcaC02g11194 Brassica carinata HOM05D008879 ORTHO05D010552 5.6e-29 130.6 81 80.2
C04p19410 Brassica napus HOM05D008879 ORTHO05D010552 5.6e-29 130.6 81 80.2
BolC4t23473H Brassica oleracea HOM05D008879 ORTHO05D010552 5.6e-29 130.6 81 80.2
A03p17370 Brassica napus HOM05D008879 ORTHO05D010552 7.3e-29 130.2 83 86.7
Carub.0004s1234 Capsella rubella HOM05D008879 ORTHO05D010552 1.3e-28 129.4 82 82.9
BraA03t11008Z Brassica rapa HOM05D008879 ORTHO05D010552 4.8e-28 127.5 83 85.5
Carub.0004s1233 Capsella rubella HOM05D008879 ORTHO05D010552 1.1e-27 126.3 81 77.8
CARHR124670 Cardamine hirsuta HOM05D008879 ORTHO05D010552 5.3e-27 124.0 81 77.8
BcaB02g10362 Brassica carinata HOM05D008879 ORTHO05D010552 1.2e-26 122.9 81 77.8
AT2G31085 Arabidopsis thaliana HOM05D008879 ORTHO05D010552 2.0e-26 122.1 82 78.0
CARHR124660 Cardamine hirsuta HOM05D008879 ORTHO05D010552 3.4e-26 121.3 81 76.5
AL4G26260 Arabidopsis lyrata HOM05D008879 ORTHO05D010552 8.4e-25 116.7 82 74.4
AT2G31083 Arabidopsis thaliana HOM05D008879 ORTHO05D010552 1.4e-24 115.9 82 74.4
AL4G26270 Arabidopsis lyrata HOM05D008879 ORTHO05D010552 1.9e-24 115.5 81 75.3
THA.LOC104826219 Tarenaya hassleriana HOM05D008879 ORTHO05D010552 1.1e-19 99.8 82 65.9
THA.LOC104826220 Tarenaya hassleriana HOM05D008879 ORTHO05D010552 1.1e-19 99.8 82 65.9
THA.LOC104815845 Tarenaya hassleriana HOM05D008879 ORTHO05D010552 1.2e-18 96.3 82 58.5
Aa31LG5G5820 Aethionema arabicum HOM05D008879 ORTHO05D010552 1.9e-16 89.0 63 68.3
Ciclev10018336m.g Citrus clementina HOM05D008879 ORTHO05D010552 4.8e-12 74.3 77 54.5
Haze_13339 Corylus avellana HOM05D008879 ORTHO05D010552 3.4e-10 68.2 83 50.6
Cfa014710 Carpinus fangiana HOM05D008879 ORTHO05D010552 1.7e-09 65.9 83 48.2
Potri.019G090800 Populus trichocarpa HOM05D008879 ORTHO05D010552 3.8e-09 64.7 74 47.3
Sabra19G0104400 Salix brachista HOM05D008879 ORTHO05D010552 1.4e-08 62.8 73 43.8
TWI14G0991 Tripterygium wilfordii HOM05D008879 ORTHO05D010552 7.1e-08 60.5 77 48.1
Sabra13G0100400 Salix brachista HOM05D008879 ORTHO05D010552 1.2e-07 59.7 62 50.0
Potri.001G376200 Populus trichocarpa HOM05D008879 ORTHO05D010552 6.1e-07 57.4 82 41.5
Haze_06271 Corylus avellana HOM05D019009 ORTHO05D013262 1.0e-06 56.6 77 41.6
COL.COLO4_17611 Corchorus olitorius HOM05D017499 ORTHO05D010552 2.3e-06 55.5 59 47.5
Thecc.10G087500 Theobroma cacao HOM05D012232 ORTHO05D013262 3.0e-06 55.1 83 42.2
TAR624G1413 Trochodendron aralioides HOM05D000001 ORTHO05D000003 8.7e-06 53.5 83 38.6


User provided reference genes

Program Settings