Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g28483 Brassica carinata HOM05D011249 ORTHO05D013690 1.0e-38 162.9 83 100.0
BcaB06g28486 Brassica carinata HOM05D011249 ORTHO05D013690 1.0e-38 162.9 83 100.0
C04p60310 Brassica napus HOM05D011249 ORTHO05D013690 1.0e-38 162.9 83 100.0
BolC4t27532H Brassica oleracea HOM05D011249 ORTHO05D013690 1.0e-38 162.9 83 100.0
BcaB06g28410 Brassica carinata HOM05D011249 ORTHO05D013690 1.5e-37 159.1 83 96.4
BraA04t17907Z Brassica rapa HOM05D011249 ORTHO05D013690 4.3e-37 157.5 83 96.4
A04p23830 Brassica napus HOM05D011249 ORTHO05D013690 2.2e-36 155.2 82 93.9
Thhalv10017928m.g Eutrema salsugineum HOM05D011249 ORTHO05D013690 3.2e-32 141.4 83 86.7
BcaB01g04066 Brassica carinata HOM05D011249 ORTHO05D013690 9.4e-32 139.8 83 85.5
Sp4g13560 Schrenkiella parvula HOM05D011249 ORTHO05D013690 1.0e-30 136.3 83 83.1
Carub.0004s1232 Capsella rubella HOM05D011249 ORTHO05D013690 1.1e-27 126.3 85 78.8
CARHR124650 Cardamine hirsuta HOM05D011249 ORTHO05D013690 4.5e-26 120.9 85 74.1
AT2G31082 Arabidopsis thaliana HOM05D011249 ORTHO05D013690 7.7e-26 120.2 84 75.0
AL426U10010 Arabidopsis lyrata HOM05D011249 ORTHO05D013690 1.7e-25 119.0 85 74.1
AL4G26250 Arabidopsis lyrata HOM05D011249 ORTHO05D013690 1.7e-25 119.0 85 74.1
Aa31LG5G5830 Aethionema arabicum HOM05D011249 ORTHO05D013690 2.1e-15 85.5 71 66.2
Ah.01g015460 Amaranthus hybridus HOM05D011249 ORTHO05D061595 6.8e-06 53.9 76 35.5


User provided reference genes

Program Settings