Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g28482 Brassica carinata HOM05D009623 ORTHO05D011251 4.2e-40 167.5 83 100.0
C04p60300 Brassica napus HOM05D009623 ORTHO05D011251 4.2e-40 167.5 83 100.0
BolC4t27531H Brassica oleracea HOM05D009623 ORTHO05D011251 4.2e-40 167.5 83 100.0
A04p23810 Brassica napus HOM05D009623 ORTHO05D011251 6.1e-39 163.7 83 98.8
BraA04t17906Z Brassica rapa HOM05D009623 ORTHO05D011251 1.4e-38 162.5 83 97.6
BcaB06g28408 Brassica carinata HOM05D009623 ORTHO05D011251 3.3e-37 157.9 83 94.0
Thhalv10017782m.g Eutrema salsugineum HOM05D009623 ORTHO05D011251 1.4e-32 142.5 83 88.0
Sp4g13550 Schrenkiella parvula HOM05D009623 ORTHO05D011251 4.2e-32 141.0 83 83.1
AL4G26240 Arabidopsis lyrata HOM05D009623 ORTHO05D011251 9.4e-32 139.8 83 86.7
AT2G31081 Arabidopsis thaliana HOM05D009623 ORTHO05D011251 6.7e-30 133.7 83 85.5
CARHR124630 Cardamine hirsuta HOM05D009623 ORTHO05D011251 4.4e-29 131.0 83 79.5
Carub.0004s1231 Capsella rubella HOM05D009623 ORTHO05D011251 5.9e-26 120.6 83 75.9
AT1G06225 Arabidopsis thaliana HOM05D009623 ORTHO05D011251 3.6e-23 111.3 85 71.8
Aa31LG5G5840 Aethionema arabicum HOM05D009623 ORTHO05D011251 5.7e-21 104.0 85 68.2
AL1G16210 Arabidopsis lyrata HOM05D009623 ORTHO05D011251 5.7e-21 104.0 85 65.9
THA.LOC109116767 Tarenaya hassleriana HOM05D009623 ORTHO05D011251 7.5e-21 103.6 83 63.9
CARHR005760 Cardamine hirsuta HOM05D009623 ORTHO05D011251 1.3e-20 102.8 85 68.2
Carub.0001s0558 Capsella rubella HOM05D009623 ORTHO05D011251 8.2e-20 100.1 83 65.1
BcaB02g06813 Brassica carinata HOM05D009623 ORTHO05D011251 7.0e-19 97.1 85 62.4
BraA10t42755Z Brassica rapa HOM05D009623 ORTHO05D011251 1.6e-18 95.9 85 61.2
A10p04840 Brassica napus HOM05D009623 ORTHO05D011251 2.7e-18 95.1 85 60.0
BolC5t29225H Brassica oleracea HOM05D009623 ORTHO05D011251 6.5e-17 90.5 85 56.5
THA.LOC104800858 Tarenaya hassleriana HOM05D009623 ORTHO05D011251 3.2e-16 88.2 83 60.2
BcaC05g24293 Brassica carinata HOM05D009623 ORTHO05D011251 7.2e-16 87.0 85 55.3
C05p04540 Brassica napus HOM05D009623 ORTHO05D011251 7.2e-16 87.0 85 55.3
Ciclev10017647m.g Citrus clementina HOM05D009623 ORTHO05D011251 1.6e-07 59.3 85 42.4
Potri.013G119100 Populus trichocarpa HOM05D017147 ORTHO05D011251 6.1e-07 57.4 79 39.2
Cpa.g.sc209.26 Carica papaya HOM05D009623 ORTHO05D011251 1.0e-06 56.6 85 47.1
Cfa014706 Carpinus fangiana HOM05D017147 ORTHO05D011251 2.3e-06 55.5 80 42.5
Manes.13G138500 Manihot esculenta HOM05D009623 ORTHO05D011251 6.8e-06 53.9 84 36.9
Potri.019G091100 Populus trichocarpa HOM05D017147 ORTHO05D011251 8.8e-06 53.5 83 37.3


User provided reference genes

Program Settings