Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g28476 Brassica carinata HOM05D008913 ORTHO05D011317 1.1e-106 389.8 182 100.0
BcaB06g28479 Brassica carinata HOM05D008913 ORTHO05D011317 3.7e-105 384.8 182 98.9
C04p60260 Brassica napus HOM05D008913 ORTHO05D011317 6.9e-104 380.6 180 98.3
BolC4t27526H Brassica oleracea HOM05D008913 ORTHO05D011317 6.9e-104 380.6 180 98.3
C09p59750 Brassica napus HOM05D005083 ORTHO05D006310 4.8e-89 331.3 185 87.0
A10p21990 Brassica napus HOM05D008913 ORTHO05D011317 2.5e-85 318.9 182 86.3
BraA10t44256Z Brassica rapa HOM05D008913 ORTHO05D011317 2.5e-85 318.9 182 86.3
BcaC04g18794 Brassica carinata HOM05D008913 ORTHO05D011317 1.8e-80 302.8 184 80.4
BcaB07g31709 Brassica carinata HOM05D008913 ORTHO05D011317 4.1e-56 221.9 190 64.2
BraA10t42594Z Brassica rapa HOM05D008913 ORTHO05D011317 5.4e-48 194.9 178 56.7
A06p07010 Brassica napus HOM05D008913 ORTHO05D011317 2.5e-45 186.0 172 57.6
C01p47600 Brassica napus HOM05D008913 ORTHO05D011317 7.3e-45 184.5 173 55.5
BolC9t58813H Brassica oleracea HOM05D008913 ORTHO05D011317 1.8e-43 179.9 101 84.2
BolC1t04730H Brassica oleracea HOM05D008913 ORTHO05D011317 2.6e-42 176.0 198 51.5
BraA06t23916Z Brassica rapa HOM05D008913 ORTHO05D011317 5.4e-40 168.3 151 57.6
BcaNung06671 Brassica carinata HOM05D008913 ORTHO05D011317 3.5e-39 165.6 150 58.7
BolC8t50471H Brassica oleracea HOM05D008913 ORTHO05D011317 8.6e-38 161.0 172 48.3
C08p28650 Brassica napus HOM05D008913 ORTHO05D011317 4.3e-37 158.7 172 48.3
BraA01t04152Z Brassica rapa HOM05D008913 ORTHO05D011317 8.1e-36 154.5 173 47.4
BcaC07g39706 Brassica carinata HOM05D008913 ORTHO05D011317 1.8e-35 153.3 172 47.1
BolC1t05281H Brassica oleracea HOM05D008913 ORTHO05D011317 1.8e-35 153.3 173 47.4
C08p28640 Brassica napus HOM05D008913 ORTHO05D011317 3.1e-35 152.5 177 48.6
BcaC09g48187 Brassica carinata HOM05D008913 ORTHO05D011317 4.0e-35 152.1 173 48.0
C08p28630 Brassica napus HOM05D008913 ORTHO05D011317 6.8e-35 151.4 177 48.0
BolC8t50470H Brassica oleracea HOM05D008913 ORTHO05D011317 6.8e-35 151.4 177 48.0
BcaC07g39704 Brassica carinata HOM05D008913 ORTHO05D011317 2.0e-34 149.8 177 47.5
BcaC07g39705 Brassica carinata HOM05D008913 ORTHO05D011317 2.0e-34 149.8 177 47.5
A10p03200 Brassica napus HOM05D008913 ORTHO05D011130 4.3e-29 132.1 124 54.8
BcaNung00080 Brassica carinata HOM05D008913 ORTHO05D011317 2.8e-28 129.4 166 43.4
BolC5t29076H Brassica oleracea HOM05D008913 ORTHO05D011130 2.4e-19 99.8 86 59.3
AT3G13280 Arabidopsis thaliana HOM05D008913 ORTHO05D011317 5.6e-13 78.6 172 37.2
AL7G41400 Arabidopsis lyrata HOM05D008913 ORTHO05D011317 2.8e-12 76.3 136 33.1
Thhalv10017826m.g Eutrema salsugineum HOM05D008913 ORTHO05D011317 6.9e-11 71.6 127 33.1
C01p23810 Brassica napus HOM05D001636 ORTHO05D040027 1.9e-08 63.5 106 35.8
BolC7t45340H Brassica oleracea HOM05D001636 ORTHO05D009134 1.9e-08 63.5 118 31.4
C07p48170 Brassica napus HOM05D001636 ORTHO05D009134 3.2e-08 62.8 114 31.6
Carub.0007s3262 Capsella rubella HOM05D001636 ORTHO05D011036 4.2e-08 62.4 120 32.5
Thhalv10017693m.g Eutrema salsugineum HOM05D001456 ORTHO05D011317 9.3e-08 61.2 155 32.3
Carub.0003s0625 Capsella rubella HOM05D001636 ORTHO05D009134 1.6e-07 60.5 137 29.2
C05p02950 Brassica napus HOM05D008913 ORTHO05D011130 3.0e-06 56.2 60 51.7
Carub.0002s1385 Capsella rubella HOM05D001636 ORTHO05D009134 3.0e-06 56.2 132 28.0
A01p18890 Brassica napus HOM05D006174 ORTHO05D007987 3.9e-06 55.8 113 33.6
BraA01t01830Z Brassica rapa HOM05D006174 ORTHO05D007987 3.9e-06 55.8 113 33.6


User provided reference genes

Program Settings