Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g28372 Brassica carinata HOM05D008517 ORTHO05D010482 1.1e-171 606.7 324 100.0
BraA04t17851Z Brassica rapa HOM05D008517 ORTHO05D010482 6.9e-155 550.8 326 93.3
BcaC02g08016 Brassica carinata HOM05D008517 ORTHO05D010482 8.4e-153 543.9 327 92.7
C04p59390 Brassica napus HOM05D008517 ORTHO05D010482 8.4e-153 543.9 327 92.7
BolC4t27447H Brassica oleracea HOM05D008517 ORTHO05D010482 8.4e-153 543.9 327 92.7
A04p23240 Brassica napus HOM05D008517 ORTHO05D010482 2.1e-151 539.3 327 92.0
Sp4g13060 Schrenkiella parvula HOM05D008517 ORTHO05D010482 3.1e-131 472.2 313 80.8
Thhalv10016822m.g Eutrema salsugineum HOM05D008517 ORTHO05D010482 2.3e-126 456.1 309 79.6
A05p14960 Brassica napus HOM05D008517 ORTHO05D010482 2.1e-119 433.0 307 77.5
BraA05t20422Z Brassica rapa HOM05D008517 ORTHO05D010482 2.1e-119 433.0 307 77.5
BcaB02g10328 Brassica carinata HOM05D008517 ORTHO05D010482 1.8e-118 429.9 307 76.2
BolC4t23540H Brassica oleracea HOM05D008517 ORTHO05D010482 3.3e-117 425.6 307 76.9
Carub.0004s1167 Capsella rubella HOM05D008517 ORTHO05D010482 1.3e-116 423.7 328 72.0
BcaC02g11142 Brassica carinata HOM05D008517 ORTHO05D010482 2.2e-116 422.9 307 76.5
C04p20010 Brassica napus HOM05D008517 ORTHO05D010482 2.2e-116 422.9 307 76.5
AL4G25390 Arabidopsis lyrata HOM05D008517 ORTHO05D010482 3.1e-115 419.1 324 73.5
AT2G30505 Arabidopsis thaliana HOM05D008517 ORTHO05D010482 2.0e-114 416.4 327 73.1
CARHR123960 Cardamine hirsuta HOM05D008517 ORTHO05D010482 5.9e-114 414.8 324 71.6
Aa31LG5G6260 Aethionema arabicum HOM05D008517 ORTHO05D010482 2.7e-74 283.1 335 54.9
THA.LOC104800796 Tarenaya hassleriana HOM05D008517 ORTHO05D010482 4.8e-47 192.6 190 51.6
Cpa.g.sc2.275 Carica papaya HOM05D008517 ORTHO05D010482 1.4e-38 164.5 225 38.2
Manes.02G211300 Manihot esculenta HOM05D008517 ORTHO05D010482 2.1e-26 124.0 159 40.9
Eucgr.J01845 Eucalyptus grandis HOM05D008517 ORTHO05D010482 1.1e-22 111.7 195 34.4
Lj6g0010191 Lotus japonicus HOM05D008517 ORTHO05D010482 7.7e-21 105.5 197 32.0
TAR633G1539 Trochodendron aralioides HOM05D000050 ORTHO05D010482 2.2e-20 104.0 190 33.7
Rhsim13G0058200 Rhododendron simsii HOM05D008517 ORTHO05D010482 2.9e-20 103.6 198 30.3
TPR.G13887 Trifolium pratense HOM05D008517 ORTHO05D010482 2.9e-20 103.6 258 27.5
Actinidia23156 Actinidia chinensis HOM05D000033 ORTHO05D000913 1.1e-19 101.7 248 26.6
arahy.Tifrunner.gnm1.ann1.92WL97 Arachis hypogaea HOM05D008517 ORTHO05D010482 1.1e-19 101.7 220 30.9
Ca_15071_v3 Cicer arietinum L. HOM05D008517 ORTHO05D010482 1.1e-19 101.7 197 29.4
Medtr3g062470 Medicago truncatula HOM05D008517 ORTHO05D010482 1.1e-19 101.7 203 32.0
arahy.Tifrunner.gnm1.ann1.Q24W9G Arachis hypogaea HOM05D008517 ORTHO05D010482 2.5e-19 100.5 220 30.0
CSS0018299 Camellia sinensis var. sinensis HOM05D008517 ORTHO05D010482 5.5e-19 99.4 200 30.5
Dinv12288 Davidia involucrata HOM05D008517 ORTHO05D010482 5.5e-19 99.4 202 30.7
Psat5g147520 Pisum sativum HOM05D008517 ORTHO05D010482 9.4e-19 98.6 192 30.7
PGR119G1844 Punica granatum HOM05D008517 ORTHO05D010482 9.4e-19 98.6 191 37.2
RcHm_v2.0_Chr5g0073561 Rosa chinensis HOM05D016692 ORTHO05D010482 1.6e-18 97.8 223 28.7
Atru.chr10.2344 Acer truncatum HOM05D008517 ORTHO05D010482 2.1e-18 97.4 186 31.2
MELO3C020481.2 Cucumis melo HOM05D008517 ORTHO05D010482 2.1e-18 97.4 189 30.2
MD11G1051900 Malus domestica HOM05D016692 ORTHO05D010482 2.1e-18 97.4 197 29.9
FAN21G3878 Fragaria x ananassa HOM05D016692 ORTHO05D010482 4.6e-18 96.3 190 30.5
Lj2A1104T76 Lonicera japonica HOM05D008517 ORTHO05D010482 1.0e-17 95.1 221 29.0
Lalb_Chr18g0054121 Lupinus albus HOM05D008517 ORTHO05D010482 1.0e-17 95.1 216 31.0
Lalb_Chr15g0085691 Lupinus albus HOM05D008517 ORTHO05D010482 1.8e-17 94.4 197 29.4
ClCG03G000030 Citrullus lanatus HOM05D008517 ORTHO05D010482 8.8e-17 92.0 188 29.3
MSTRG.12716 Avicennia marina HOM05D008517 ORTHO05D010482 7.4e-16 89.0 185 30.3
FvH4_3g40830 Fragaria vesca HOM05D016692 ORTHO05D010482 7.4e-16 89.0 255 27.1
FAN25G0531 Fragaria x ananassa HOM05D000033 ORTHO05D000913 9.7e-16 88.6 296 26.0
FAN11G0742 Fragaria x ananassa HOM05D016692 ORTHO05D010482 2.8e-15 87.0 255 27.1
MD03G1049700 Malus domestica HOM05D016692 ORTHO05D010482 2.8e-15 87.0 184 29.3
VMungo0540G2173 Vigna mungo HOM05D008517 ORTHO05D010482 6.3e-15 85.9 243 27.6
Glyma.18G051200 Glycine max HOM05D008517 ORTHO05D010482 8.2e-15 85.5 160 33.8
Glyma.11G199600 Glycine max HOM05D008517 ORTHO05D010482 1.1e-14 85.1 160 31.9
Phvul.006G080100 Phaseolus vulgaris HOM05D008517 ORTHO05D010482 1.1e-14 85.1 188 31.9
Sed0007690 Sechium edule HOM05D008517 ORTHO05D010482 2.9e-12 77.0 220 27.3
CARHR000970 Cardamine hirsuta HOM05D005178 ORTHO05D006123 1.4e-11 74.7 188 30.9
Aa31LG1G27670 Aethionema arabicum HOM05D005178 ORTHO05D006123 8.8e-09 65.5 189 27.0
Atru.chr5.616 Acer truncatum HOM05D005178 ORTHO05D006123 4.4e-08 63.2 161 27.3
Nn5g26812 Nelumbo nucifera HOM05D008517 ORTHO05D010482 7.4e-08 62.4 162 30.2
Lsat_1_v5_gn_8_99661 Lactuca sativa HOM05D008517 ORTHO05D010482 2.2e-07 60.8 174 29.9
BraA10t42331Z Brassica rapa HOM05D005178 ORTHO05D006123 2.8e-07 60.5 166 30.7
Thhalv10009686m.g Eutrema salsugineum HOM05D005178 ORTHO05D006123 3.7e-07 60.1 125 32.0
Carub.0001s0080 Capsella rubella HOM05D005178 ORTHO05D006123 4.8e-07 59.7 147 30.6
Ca_09491_v3 Cicer arietinum L. HOM05D005178 ORTHO05D006123 4.8e-07 59.7 156 24.4
BcaB03g13583 Brassica carinata HOM05D005178 ORTHO05D006123 6.3e-07 59.3 166 30.7
C05p00550 Brassica napus HOM05D005178 ORTHO05D006123 6.3e-07 59.3 166 30.7
BolC5t28844H Brassica oleracea HOM05D005178 ORTHO05D006123 6.3e-07 59.3 166 30.7
A10p00520 Brassica napus HOM05D005178 ORTHO05D006123 1.1e-06 58.5 166 30.1
Sp1g00860 Schrenkiella parvula HOM05D005178 ORTHO05D006123 1.1e-06 58.5 125 32.8
PGR042G2135 Punica granatum HOM05D005178 ORTHO05D006123 4.1e-06 56.6 133 30.1


User provided reference genes

Program Settings