Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g28317 Brassica carinata HOM05D004551 ORTHO05D005262 5.6e-35 150.6 87 100.0
Sp4g12260 Schrenkiella parvula HOM05D004551 ORTHO05D005262 1.7e-31 139.0 84 81.0
A04p22520 Brassica napus HOM05D004551 ORTHO05D005262 4.9e-31 137.5 84 79.8
C04p21310 Brassica napus HOM05D004551 ORTHO05D005262 4.9e-31 137.5 87 79.3
AL4G24240 Arabidopsis lyrata HOM05D004551 ORTHO05D005262 1.4e-30 136.0 84 77.4
A05p15870 Brassica napus HOM05D004551 ORTHO05D005262 1.4e-30 136.0 84 79.8
BcaB02g10259 Brassica carinata HOM05D004551 ORTHO05D005262 1.2e-29 132.9 84 76.2
C04p58670 Brassica napus HOM05D004551 ORTHO05D005262 2.1e-29 132.1 96 71.9
BolC4t27387H Brassica oleracea HOM05D004551 ORTHO05D005262 2.7e-29 131.7 93 73.1
CARHR122870 Cardamine hirsuta HOM05D004551 ORTHO05D005262 4.6e-29 131.0 81 77.8
Thhalv10017490m.g Eutrema salsugineum HOM05D004551 ORTHO05D005262 2.3e-28 128.6 84 73.8
AT2G29530 Arabidopsis thaliana HOM05D004551 ORTHO05D005262 3.9e-28 127.9 80 76.2
Aa31LG5G6930 Aethionema arabicum HOM05D004551 ORTHO05D005262 5.1e-28 127.5 80 76.2
Carub.0004s1058 Capsella rubella HOM05D004551 ORTHO05D005262 1.9e-27 125.6 84 71.4
THA.LOC104800711 Tarenaya hassleriana HOM05D004551 ORTHO05D005262 4.3e-27 124.4 80 72.5
BraA04t17797Z Brassica rapa HOM05D004551 ORTHO05D005262 6.2e-26 120.6 113 58.4
Duzib168G2386 Durio zibethinus HOM05D004551 ORTHO05D005262 7.5e-24 113.6 78 69.2
Thecc.09G309400 Theobroma cacao HOM05D004551 ORTHO05D005262 7.5e-24 113.6 78 69.2
TWI75G0664 Tripterygium wilfordii HOM05D004551 ORTHO05D005262 2.2e-23 112.1 83 62.7
COL.COLO4_19068 Corchorus olitorius HOM05D004551 ORTHO05D005262 2.9e-23 111.7 77 68.8
Gohir.A03G047200 Gossypium hirsutum HOM05D004551 ORTHO05D005262 2.9e-23 111.7 79 67.1
Gorai.003G126500 Gossypium raimondii HOM05D004551 ORTHO05D005262 2.9e-23 111.7 79 67.1
Ciclev10029702m.g Citrus clementina HOM05D004551 ORTHO05D005262 1.1e-22 109.8 78 66.7
Gohir.A05G091300 Gossypium hirsutum HOM05D004551 ORTHO05D005262 1.1e-22 109.8 78 66.7
Gohir.D05G092200 Gossypium hirsutum HOM05D004551 ORTHO05D005262 1.1e-22 109.8 78 66.7
Gorai.009G094700 Gossypium raimondii HOM05D004551 ORTHO05D005262 1.1e-22 109.8 78 66.7
Duzib150G1644 Durio zibethinus HOM05D004551 ORTHO05D005262 4.1e-22 107.8 78 74.4
Duzib170G1093 Durio zibethinus HOM05D004551 ORTHO05D005262 4.1e-22 107.8 77 72.7
BraA05t20500Z Brassica rapa HOM05D004551 ORTHO05D005262 7.1e-22 107.1 137 48.9
ClCG03G001090 Citrullus lanatus HOM05D004551 ORTHO05D005262 2.1e-21 105.5 84 64.3
MELO3C020586.2 Cucumis melo HOM05D004551 ORTHO05D005262 2.7e-21 105.1 84 64.3
CsaV3_1G035840 Cucumis sativus L. HOM05D004551 ORTHO05D005262 2.7e-21 105.1 84 64.3
Potri.009G039600 Populus trichocarpa HOM05D004551 ORTHO05D005262 3.5e-21 104.8 78 59.0
HanXRQChr08g0237601 Helianthus annuus HOM05D004551 ORTHO05D005262 1.3e-20 102.8 84 57.1
Potri.001G246500 Populus trichocarpa HOM05D004551 ORTHO05D005262 1.7e-20 102.4 78 57.7
HanXRQChr02g0055991 Helianthus annuus HOM05D004551 ORTHO05D005262 2.3e-20 102.1 84 57.1
Sed0000742 Sechium edule HOM05D004551 ORTHO05D005262 2.3e-20 102.1 84 63.1
Lsat_1_v5_gn_9_25241 Lactuca sativa HOM05D004551 ORTHO05D005262 3.9e-20 101.3 84 56.0
HanXRQChr09g0243371 Helianthus annuus HOM05D004551 ORTHO05D005262 5.1e-20 100.9 84 56.0
HanXRQChr09g0243381 Helianthus annuus HOM05D004551 ORTHO05D005262 5.1e-20 100.9 84 56.0
Eucgr.B02289 Eucalyptus grandis HOM05D004551 ORTHO05D005262 6.6e-20 100.5 84 64.3
Atru.chr3.4045 Acer truncatum HOM05D004551 ORTHO05D005262 8.6e-20 100.1 76 71.1
Phvul.008G288300 Phaseolus vulgaris HOM05D004551 ORTHO05D005262 8.6e-20 100.1 77 59.7
CiPaw.14G063000 Carya illinoinensis HOM05D004551 ORTHO05D005262 1.1e-19 99.8 84 63.1
MD11G1085200 Malus domestica HOM05D004551 ORTHO05D005262 1.5e-19 99.4 84 63.1
Prupe.6G065200 Prunus persica HOM05D004551 ORTHO05D005262 1.5e-19 99.4 83 54.2
Ca_01298_v3 Cicer arietinum L. HOM05D004551 ORTHO05D005262 1.9e-19 99.0 84 53.6
FvH4_3g37430 Fragaria vesca HOM05D004551 ORTHO05D005262 2.5e-19 98.6 76 60.5
FAN11G1128 Fragaria x ananassa HOM05D004551 ORTHO05D005262 2.5e-19 98.6 76 60.5
CSS0004921 Camellia sinensis var. sinensis HOM05D004551 ORTHO05D005262 4.3e-19 97.8 84 60.7
Lj4g0001727 Lotus japonicus HOM05D004551 ORTHO05D005262 5.6e-19 97.4 84 54.8
RcHm_v2.0_Chr5g0067321 Rosa chinensis HOM05D004551 ORTHO05D005262 5.6e-19 97.4 78 65.4
FAN16G1443 Fragaria x ananassa HOM05D004551 ORTHO05D005262 7.3e-19 97.1 76 59.2
FAN16G2867 Fragaria x ananassa HOM05D004551 ORTHO05D005262 7.3e-19 97.1 76 59.2
FAN25G2220 Fragaria x ananassa HOM05D004551 ORTHO05D005262 7.3e-19 97.1 76 59.2
Glyma.13G339700 Glycine max HOM05D004551 ORTHO05D005262 7.3e-19 97.1 77 55.8
CiPaw.13G084300 Carya illinoinensis HOM05D004551 ORTHO05D005262 9.5e-19 96.7 84 60.7
Glyma.02G308400 Glycine max HOM05D004551 ORTHO05D005262 9.5e-19 96.7 77 55.8
Oeu017418.1 Olea europaea HOM05D004551 ORTHO05D005262 9.5e-19 96.7 84 52.4
Lj3g0011983 Lotus japonicus HOM05D004551 ORTHO05D005262 1.2e-18 96.3 84 53.6
Dinv35533 Davidia involucrata HOM05D004551 ORTHO05D005262 1.6e-18 95.9 77 54.5
Sc12g0001090 Simmondsia chinensis HOM05D004551 ORTHO05D005262 1.6e-18 95.9 77 66.2
Dinv34317 Davidia involucrata HOM05D004551 ORTHO05D005262 2.1e-18 95.5 84 61.9
Lalb_Chr24g0397121 Lupinus albus HOM05D004551 ORTHO05D005262 2.1e-18 95.5 78 55.1
Psat5g285840 Pisum sativum HOM05D004551 ORTHO05D005262 2.1e-18 95.5 83 53.0
GSVIVG01024832001 Vitis vinifera HOM05D004551 ORTHO05D005262 2.1e-18 95.5 77 62.3
ECA247G0999 Erigeron canadensis HOM05D004551 ORTHO05D005262 2.8e-18 95.1 83 69.9
Hma1.2p1_0543F.1_g175360 Hydrangea macrophylla HOM05D004551 ORTHO05D005262 2.8e-18 95.1 84 59.5
Glyma.14G004700 Glycine max HOM05D004551 ORTHO05D005262 3.6e-18 94.7 77 57.1
Glyma.15G034700 Glycine max HOM05D004551 ORTHO05D005262 3.6e-18 94.7 76 56.6
Hma1.2p1_1521F.1_g288710 Hydrangea macrophylla HOM05D004551 ORTHO05D005262 3.6e-18 94.7 77 55.8
QL01p028907 Quercus lobata HOM05D004551 ORTHO05D005262 4.7e-18 94.4 77 62.3
MBI05_g10286_MAGBIO Magnolia biondii HOM05D004551 ORTHO05D005262 8.1e-18 93.6 76 53.9
Manes.01G166600 Manihot esculenta HOM05D004551 ORTHO05D005262 8.1e-18 93.6 84 52.4
Manes.02G124000 Manihot esculenta HOM05D004551 ORTHO05D005262 8.1e-18 93.6 84 51.2
Nn2g13555 Nelumbo nucifera HOM05D004551 ORTHO05D005262 8.1e-18 93.6 77 62.3
Hund18875 Selenicereus undatus HOM05D004551 ORTHO05D005262 8.1e-18 93.6 80 53.8
arahy.Tifrunner.gnm1.ann1.CMV3ZL Arachis hypogaea HOM05D004551 ORTHO05D005262 1.4e-17 92.8 86 51.2
arahy.Tifrunner.gnm1.ann1.S44GTI Arachis hypogaea HOM05D004551 ORTHO05D005262 1.8e-17 92.4 86 50.0
Oeu036200.1 Olea europaea HOM05D004551 ORTHO05D005262 1.8e-17 92.4 81 51.9
TPR.G6876 Trifolium pratense HOM05D004551 ORTHO05D005262 1.8e-17 92.4 77 51.9
CSS0032515 Camellia sinensis var. sinensis HOM05D004551 ORTHO05D005262 2.4e-17 92.0 77 51.9
CANSAT54G1854 Cannabis sativa HOM05D004551 ORTHO05D005262 2.4e-17 92.0 75 65.3
Cc01_g13610 Coffea canephora HOM05D004551 ORTHO05D005262 2.4e-17 92.0 75 66.7
Pp3c1_35930 Physcomitrium patens HOM05D004551 ORTHO05D005262 3.1e-17 91.7 74 54.1
PSO339G1751 Papaver somniferum HOM05D004551 ORTHO05D005262 4.0e-17 91.3 76 53.9
PSO384G2886 Papaver somniferum HOM05D004551 ORTHO05D005262 4.0e-17 91.3 76 53.9
Medtr2g097870 Medicago truncatula HOM05D004551 ORTHO05D005262 6.8e-17 90.5 81 50.6
Rhsim04G0164100 Rhododendron simsii HOM05D004551 ORTHO05D005262 6.8e-17 90.5 84 52.4
Cc06_g01910 Coffea canephora HOM05D004551 ORTHO05D005262 8.9e-17 90.1 84 56.0
Actinidia08554 Actinidia chinensis HOM05D004551 ORTHO05D005262 1.5e-16 89.4 77 62.3
Aqoxy1G00774 Aquilegia oxysepala HOM05D004551 ORTHO05D005262 1.5e-16 89.4 78 60.3
Migut.J00249 Erythranthe guttata HOM05D004551 ORTHO05D005262 1.5e-16 89.4 84 47.6
CDE02G0008 Ceratophyllum demersum HOM05D004551 ORTHO05D005262 2.0e-16 89.0 74 51.4
CDE04G2361 Ceratophyllum demersum HOM05D004551 ORTHO05D005262 2.0e-16 89.0 74 51.4
Mapoly0052s0053 Marchantia polymorpha HOM05D004551 ORTHO05D005262 2.6e-16 88.6 73 53.4
EL10Ac7g16095 Beta vulgaris HOM05D004551 ORTHO05D005262 3.4e-16 88.2 77 53.2
FAN21G1099 Fragaria x ananassa HOM05D004551 ORTHO05D005262 3.4e-16 88.2 70 58.6
PGSC0003DMG402020339 Solanum tuberosum HOM05D004551 ORTHO05D005262 5.8e-16 87.4 77 50.6
Nitab4.5_0002152g0070 Nicotiana tabacum HOM05D004551 ORTHO05D005262 7.6e-16 87.0 76 51.3
Sed0006275 Sechium edule HOM05D004551 ORTHO05D005262 7.6e-16 87.0 74 62.2
unitig_578.g15888 Utricularia gibba HOM05D004551 ORTHO05D005262 7.6e-16 87.0 80 47.5
Zm00001eb211450 Zea mays HOM05D004551 ORTHO05D005262 7.6e-16 87.0 71 54.9
DCAR_005918 Daucus carota HOM05D004551 ORTHO05D005262 9.9e-16 86.7 70 72.9
Peaxi162Scf01302g00041 Petunia axillaris HOM05D004551 ORTHO05D005262 9.9e-16 86.7 76 51.3
Solyc09g011760.3 Solanum lycopersicum HOM05D004551 ORTHO05D005262 9.9e-16 86.7 77 49.4
Sopen09g006580 Solanum pennellii HOM05D004551 ORTHO05D005262 9.9e-16 86.7 77 49.4
Os03g0825400 Oryza sativa ssp. japonica HOM05D004551 ORTHO05D005262 1.3e-15 86.3 73 61.6
AagrBONN_evm.TU.Sc2ySwM_117.3522 Anthoceros agrestis HOM05D004551 ORTHO05D005262 2.2e-15 85.5 72 52.8
Ah.15g090420 Amaranthus hybridus HOM05D004551 ORTHO05D005262 2.9e-15 85.1 72 54.2
SalBow1G6960 Salvia bowleyana HOM05D004551 ORTHO05D005262 3.8e-15 84.7 77 49.4
vmacro08615 Vaccinium macrocarpon HOM05D004551 ORTHO05D005262 3.8e-15 84.7 78 53.8
Migut.L01982 Erythranthe guttata HOM05D004551 ORTHO05D005262 4.9e-15 84.3 77 48.1
Lalb_Chr22g0352421 Lupinus albus HOM05D004551 ORTHO05D005262 4.9e-15 84.3 66 57.6
Os07g0243100 Oryza sativa ssp. japonica HOM05D004551 ORTHO05D005262 4.9e-15 84.3 68 55.9
Glyma.15G229800 Glycine max HOM05D004551 ORTHO05D005262 1.1e-14 83.2 66 56.1
Dinv17073 Davidia involucrata HOM05D004551 ORTHO05D005262 1.4e-14 82.8 71 56.3
Dinv43017 Davidia involucrata HOM05D004551 ORTHO05D005262 1.4e-14 82.8 71 56.3
Sabra16G0149600 Salix brachista HOM05D004551 ORTHO05D005262 1.4e-14 82.8 64 57.8
Sopen06g001810 Solanum pennellii HOM05D004551 ORTHO05D005262 1.9e-14 82.4 84 46.4
PGSC0003DMG400020830 Solanum tuberosum HOM05D004551 ORTHO05D005262 2.4e-14 82.0 78 50.0
Solyc06g005840.4 Solanum lycopersicum HOM05D004551 ORTHO05D005262 4.2e-14 81.3 84 46.4
Haze_24227 Corylus avellana HOM05D004551 ORTHO05D005262 5.4e-14 80.9 68 55.9
PGR102G3288 Punica granatum HOM05D004551 ORTHO05D005262 2.1e-13 79.0 69 63.8
MD03G1080700 Malus domestica HOM05D004551 ORTHO05D005262 2.7e-13 78.6 61 55.7
BolC4t23660H Brassica oleracea HOM05D004551 ORTHO05D005262 3.5e-13 78.2 57 66.7
vmacro03012 Vaccinium macrocarpon HOM05D004551 ORTHO05D005262 4.6e-13 77.8 70 51.4
Gohir.D03G120000 Gossypium hirsutum HOM05D004551 ORTHO05D005262 6.0e-13 77.4 79 53.2
AUR62020055 Chenopodium quinoa HOM05D004551 ORTHO05D005262 7.8e-13 77.0 66 56.1
Nitab4.5_0002405g0130 Nicotiana tabacum HOM05D004551 ORTHO05D005262 7.8e-13 77.0 63 54.0
HPP92_018167 Vanilla planifolia HOM05D004551 ORTHO05D005262 7.8e-13 77.0 59 61.0
ECA236G0522 Erigeron canadensis HOM05D004551 ORTHO05D005262 1.7e-12 75.9 59 57.6
unitig_8.g4441 Utricularia gibba HOM05D004551 ORTHO05D005262 2.3e-12 75.5 93 43.0
MCO07G332 Micromonas commoda HOM05D004551 ORTHO05D005262 8.7e-12 73.6 66 48.5
CAN.G978.3 Capsicum annuum HOM05D004551 ORTHO05D005262 1.5e-11 72.8 65 49.2
CBR_g3168 Chara braunii HOM05D004551 ORTHO05D005262 5.6e-11 70.9 74 41.9
Nitab4.5_0000880g0120 Nicotiana tabacum HOM05D004551 ORTHO05D005262 5.6e-11 70.9 58 56.9
Ah.13g070320 Amaranthus hybridus HOM05D004551 ORTHO05D005262 4.8e-10 67.8 56 57.1
VMungo0647G0519 Vigna mungo HOM05D000879 ORTHO05D002864 4.8e-10 67.8 53 52.8
SMO172G0051 Selaginella moellendorffii HOM05D004551 ORTHO05D005262 8.1e-10 67.0 70 44.3
Oeu030799.1 Olea europaea HOM05D004551 ORTHO05D005262 3.1e-09 65.1 52 53.8
MD02G1203300 Malus domestica HOM05D004551 ORTHO05D005262 6.9e-09 63.9 50 60.0
Cre12.g514900 Chlamydomonas reinhardtii HOM05D004551 ORTHO05D005262 7.6e-08 60.5 82 39.0
QL02p091823 Quercus lobata HOM05D000741 ORTHO05D000506 7.6e-08 60.5 52 48.1
EL10Ac7g17098 Beta vulgaris HOM05D004551 ORTHO05D005262 9.9e-08 60.1 93 37.6
QL02p079044 Quercus lobata HOM05D004551 ORTHO05D005262 1.3e-07 59.7 51 49.0
HPP92_018179 Vanilla planifolia HOM05D004551 ORTHO05D005262 2.2e-07 58.9 48 60.4
AUR62001717 Chenopodium quinoa HOM05D004551 ORTHO05D005262 2.9e-07 58.5 96 36.5
Phvul.L008843 Phaseolus vulgaris HOM05D004551 ORTHO05D005262 2.9e-07 58.5 77 42.9
Zm00001eb063090 Zea mays HOM05D004551 ORTHO05D005262 3.2e-06 55.1 68 44.1
DCAR_007410 Daucus carota HOM05D004551 ORTHO05D005262 4.2e-06 54.7 69 44.9
SGA_v2.0_scaffold75G24985 Striga asiatica HOM05D001002 ORTHO05D000802 4.2e-06 54.7 40 55.0
PRCOL_00001542 Prasinoderma coloniale HOM05D002457 ORTHO05D005262 5.4e-06 54.3 59 52.5


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