Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g28230 Brassica carinata HOM05D006265 ORTHO05D007822 7.4e-30 133.3 70 100.0
CARHR153580 Cardamine hirsuta HOM05D006265 ORTHO05D007822 4.4e-14 80.9 45 91.1
A06p39550 Brassica napus HOM05D006265 ORTHO05D007822 1.7e-13 79.0 45 88.9
AL5G20540 Arabidopsis lyrata HOM05D006265 ORTHO05D007822 4.8e-13 77.4 45 86.7
C07p38720 Brassica napus HOM05D006265 ORTHO05D007822 6.3e-13 77.0 45 88.9
BolC7t44392H Brassica oleracea HOM05D006265 ORTHO05D007822 8.2e-13 76.6 45 86.7
BraA06t26870Z Brassica rapa HOM05D006265 ORTHO05D007822 8.2e-13 76.6 45 86.7
Sp2g18310 Schrenkiella parvula HOM05D006265 ORTHO05D007822 1.8e-12 75.5 44 86.4
AT3G32940 Arabidopsis thaliana HOM05D006265 ORTHO05D007822 2.4e-12 75.1 45 82.2
Thhalv10003817m.g Eutrema salsugineum HOM05D006265 ORTHO05D007822 9.1e-12 73.2 46 80.4
Aa31sc13G30 Aethionema arabicum HOM05D006265 ORTHO05D007822 3.5e-11 71.2 45 80.0
Carub.0005s0594 Capsella rubella HOM05D006265 ORTHO05D007822 4.5e-11 70.9 45 80.0
THA.LOC104811062 Tarenaya hassleriana HOM05D006265 ORTHO05D007822 4.2e-09 64.3 45 71.1
QL01p007989 Quercus lobata HOM05D006265 ORTHO05D007822 3.0e-07 58.2 44 61.4
MD03G1010200 Malus domestica HOM05D006265 ORTHO05D007822 8.8e-07 56.6 46 63.0
Sed0014267 Sechium edule HOM05D006265 ORTHO05D007822 8.8e-07 56.6 60 50.0
Dinv09750 Davidia involucrata HOM05D006265 ORTHO05D007822 1.2e-06 56.2 46 56.5
MSTRG.18861 Avicennia marina HOM05D006265 ORTHO05D007822 1.5e-06 55.8 49 49.0
vmacro04214 Vaccinium macrocarpon HOM05D006265 ORTHO05D007822 1.5e-06 55.8 48 56.2
vmacro22565 Vaccinium macrocarpon HOM05D006265 ORTHO05D007822 1.5e-06 55.8 48 56.2
Rhsim13G0230200 Rhododendron simsii HOM05D006265 ORTHO05D007822 2.0e-06 55.5 48 54.2
SGA_v2.0_scaffold18G08319 Striga asiatica HOM05D006265 ORTHO05D007822 2.0e-06 55.5 47 48.9
MELO3C014671.2 Cucumis melo HOM05D006265 ORTHO05D007822 3.3e-06 54.7 44 59.1
Oeu029371.1 Olea europaea HOM05D006265 ORTHO05D007822 3.3e-06 54.7 47 53.2
CsaV3_4G023450 Cucumis sativus L. HOM05D006265 ORTHO05D007822 4.4e-06 54.3 44 56.8
Manes.15G105700 Manihot esculenta HOM05D006265 ORTHO05D007822 4.4e-06 54.3 47 57.4
Atru.chr3.2261 Acer truncatum HOM05D006265 ORTHO05D007822 7.5e-06 53.5 45 64.4
Atru.chr3.2267 Acer truncatum HOM05D006265 ORTHO05D007822 7.5e-06 53.5 45 64.4
Actinidia39362 Actinidia chinensis HOM05D006265 ORTHO05D007822 7.5e-06 53.5 46 56.5
Cfa009611 Carpinus fangiana HOM05D006265 ORTHO05D007822 9.7e-06 53.1 44 56.8
ClCG02G023910 Citrullus lanatus HOM05D006265 ORTHO05D007822 9.7e-06 53.1 44 54.5
Haze_22984 Corylus avellana HOM05D006265 ORTHO05D007822 9.7e-06 53.1 44 56.8
MD03G1009900 Malus domestica HOM05D006265 ORTHO05D007822 9.7e-06 53.1 44 59.1


User provided reference genes

Program Settings