Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g28215 Brassica carinata HOM05D011190 ORTHO05D013686 4.4e-63 245.0 176 100.0
BcaC02g08169 Brassica carinata HOM05D011190 ORTHO05D013686 2.4e-45 186.0 190 81.6
C04p57660 Brassica napus HOM05D011190 ORTHO05D013686 2.4e-45 186.0 190 81.6
A04p21570 Brassica napus HOM05D011190 ORTHO05D013686 6.6e-43 177.9 190 80.5
BraA04t17722Z Brassica rapa HOM05D011190 ORTHO05D013686 1.9e-42 176.4 190 80.0
BolC4t27286H Brassica oleracea HOM05D011190 ORTHO05D013686 3.8e-30 135.6 195 68.7
Sp4g11260 Schrenkiella parvula HOM05D011190 ORTHO05D013686 3.4e-23 112.5 220 60.9
Thhalv10017667m.g Eutrema salsugineum HOM05D011190 ORTHO05D013686 2.9e-22 109.4 75 78.7
BolC4t23788H Brassica oleracea HOM05D011190 ORTHO05D013686 4.3e-18 95.5 74 71.6
BraA07t29606Z Brassica rapa HOM05D011190 ORTHO05D013686 1.3e-17 94.0 239 51.9
BcaNung07071 Brassica carinata HOM05D011190 ORTHO05D013686 4.8e-17 92.0 241 52.3
AL4G21580 Arabidopsis lyrata HOM05D011190 ORTHO05D013686 1.1e-16 90.9 70 70.0
Aa31LG5G7780 Aethionema arabicum HOM05D011190 ORTHO05D013686 2.4e-16 89.7 224 47.8
AT2G28440 Arabidopsis thaliana HOM05D011190 ORTHO05D013686 3.1e-16 89.4 70 71.4
CARHR121400 Cardamine hirsuta HOM05D011190 ORTHO05D013686 9.0e-16 87.8 221 54.3
C04p22940 Brassica napus HOM05D011190 ORTHO05D013686 5.8e-15 85.1 217 53.9
PSO063G5002 Papaver somniferum HOM05D011190 ORTHO05D004445 1.2e-07 60.8 56 51.8
PSO339G4510 Papaver somniferum HOM05D011190 ORTHO05D004445 1.2e-07 60.8 56 51.8
Glyma.12G067800 Glycine max HOM05D004188 ORTHO05D004445 9.9e-07 57.8 50 50.0
Glyma.11G146900 Glycine max HOM05D004188 ORTHO05D004445 2.2e-06 56.6 53 49.1
Manes.04G021600 Manihot esculenta HOM05D004188 ORTHO05D004445 2.2e-06 56.6 72 43.1
PGR102G1665 Punica granatum HOM05D004188 ORTHO05D004445 2.9e-06 56.2 53 49.1
Dinv31327 Davidia involucrata HOM05D001979 ORTHO05D001961 4.9e-06 55.5 44 59.1


User provided reference genes

Program Settings