Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g28041 Brassica carinata HOM05D000051 ORTHO05D000015 8.7e-63 243.4 120 100.0
BcaB06g28043 Brassica carinata HOM05D000051 ORTHO05D000015 3.5e-56 221.5 166 72.3
BcaC02g08367 Brassica carinata HOM05D000051 ORTHO05D000015 1.1e-46 189.9 164 64.6
C04p55150 Brassica napus HOM05D000051 ORTHO05D000015 1.1e-46 189.9 164 64.6
BolC4t27053H Brassica oleracea HOM05D000051 ORTHO05D000015 1.1e-46 189.9 164 64.6
A04p19410 Brassica napus HOM05D000051 ORTHO05D000015 2.5e-33 145.6 163 50.3
BraA04t17536Z Brassica rapa HOM05D000051 ORTHO05D000015 1.2e-32 143.3 163 49.7
C04p54990 Brassica napus HOM05D000051 ORTHO05D000015 9.7e-22 107.1 65 80.0
BolC4t27034H Brassica oleracea HOM05D000051 ORTHO05D000015 2.8e-21 105.5 144 46.5
Thhalv10000196m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 4.8e-21 104.8 130 47.7
BolC3t15582H Brassica oleracea HOM05D000051 ORTHO05D000015 8.3e-21 104.0 148 44.6
C03p32410 Brassica napus HOM05D000051 ORTHO05D000015 1.4e-20 103.2 148 43.2
Carub.0004s0736 Capsella rubella HOM05D000051 ORTHO05D000015 2.5e-17 92.4 149 40.3
AL8G32530 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.6e-16 89.7 147 38.1
CARHR270410 Cardamine hirsuta HOM05D000051 ORTHO05D000015 2.1e-16 89.4 148 38.5
AL4G20070 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 3.6e-16 88.6 149 39.6
AT2G26860 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 4.7e-16 88.2 149 39.6
Carub.0004s0734 Capsella rubella HOM05D000051 ORTHO05D000015 2.3e-15 85.9 147 38.8
Thhalv10013701m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 5.7e-14 81.3 142 38.0
BcaB01g03002 Brassica carinata HOM05D000051 ORTHO05D000015 1.3e-13 80.1 129 40.3
AL8G32520 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.7e-13 79.7 147 40.1
BraA09t41763Z Brassica rapa HOM05D000051 ORTHO05D000015 3.7e-13 78.6 137 36.5
CARHR270430 Cardamine hirsuta HOM05D000051 ORTHO05D000015 6.3e-13 77.8 144 38.2
BcaB08g37442 Brassica carinata HOM05D000051 ORTHO05D000015 3.1e-12 75.5 148 33.1
A04p19550 Brassica napus HOM05D000051 ORTHO05D027194 3.1e-12 75.5 40 92.5
BraA04t17548Z Brassica rapa HOM05D000051 ORTHO05D027194 3.1e-12 75.5 40 92.5
AT5G60610 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 4.1e-12 75.1 148 33.8
CARHR152780 Cardamine hirsuta HOM05D000051 ORTHO05D000015 7.0e-12 74.3 144 37.5
CARHR270420 Cardamine hirsuta HOM05D000051 ORTHO05D000015 7.0e-12 74.3 144 35.4
A02p11930 Brassica napus HOM05D000051 ORTHO05D000015 2.7e-11 72.4 147 33.3
BraA02t06257Z Brassica rapa HOM05D000051 ORTHO05D000015 2.7e-11 72.4 147 33.3
CARHR152840 Cardamine hirsuta HOM05D000051 ORTHO05D000015 5.9e-11 71.2 61 54.1
BraA03t11032Z Brassica rapa HOM05D000051 ORTHO05D000015 1.7e-10 69.7 120 35.0
CARHR105990 Cardamine hirsuta HOM05D000051 ORTHO05D000015 1.7e-10 69.7 54 59.3
A02p09180 Brassica napus HOM05D000051 ORTHO05D000015 2.3e-10 69.3 126 38.1
BraA02t05985Z Brassica rapa HOM05D000051 ORTHO05D000015 2.3e-10 69.3 126 38.1
C08p47800 Brassica napus HOM05D000051 ORTHO05D000015 5.0e-10 68.2 135 34.8
Thhalv10011562m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 6.6e-10 67.8 152 34.9
Thhalv10015423m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 2.5e-09 65.9 115 35.7
Thhalv10027384m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 3.3e-09 65.5 103 37.9
A09p64190 Brassica napus HOM05D000051 ORTHO05D000015 4.2e-09 65.1 135 33.3
AT5G38565 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 5.5e-09 64.7 119 37.8
Carub.0008s1717 Capsella rubella HOM05D000051 ORTHO05D000015 9.5e-09 63.9 150 34.0
CARHR270400 Cardamine hirsuta HOM05D000051 ORTHO05D000015 9.5e-09 63.9 148 32.4
A09p47900 Brassica napus HOM05D000051 ORTHO05D000015 2.1e-08 62.8 105 32.4
CARHR274270 Cardamine hirsuta HOM05D000051 ORTHO05D000015 2.1e-08 62.8 151 30.5
AT5G56400 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 2.8e-08 62.4 147 28.6
Carub.0008s1718 Capsella rubella HOM05D000051 ORTHO05D000015 2.8e-08 62.4 68 44.1
CARHR274280 Cardamine hirsuta HOM05D000051 ORTHO05D000015 2.8e-08 62.4 155 33.5
AT5G56690 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 3.6e-08 62.0 150 32.0
BcaB01g04399 Brassica carinata HOM05D000051 ORTHO05D000015 6.1e-08 61.2 104 35.6
BcaB05g22262 Brassica carinata HOM05D000051 ORTHO05D000015 6.1e-08 61.2 126 33.3
Carub.0008s1689 Capsella rubella HOM05D000051 ORTHO05D000015 6.1e-08 61.2 145 31.7
C08p30140 Brassica napus HOM05D000051 ORTHO05D000015 8.0e-08 60.8 105 32.4
CARHR269990 Cardamine hirsuta HOM05D000051 ORTHO05D000015 8.0e-08 60.8 145 31.7
Thhalv10015489m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 8.0e-08 60.8 141 30.5
THA.LOC104811717 Tarenaya hassleriana HOM05D000051 ORTHO05D000015 8.0e-08 60.8 145 33.8
AT3G54910 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 1.0e-07 60.5 142 30.3
BcaB05g21945 Brassica carinata HOM05D000051 ORTHO05D000015 1.0e-07 60.5 111 36.0
A03p17670 Brassica napus HOM05D000051 ORTHO05D000015 1.0e-07 60.5 131 31.3
C08p30750 Brassica napus HOM05D000051 ORTHO05D000015 1.0e-07 60.5 105 33.3
BraA02t05981Z Brassica rapa HOM05D000051 ORTHO05D000015 1.0e-07 60.5 142 30.3
Thhalv10019567m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 1.0e-07 60.5 142 28.9
AL8G32140 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.8e-07 59.7 144 30.6
AT5G56420 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 1.8e-07 59.7 145 31.7
BcaC06g32817 Brassica carinata HOM05D000051 ORTHO05D000015 1.8e-07 59.7 103 32.0
A03p13460 Brassica napus HOM05D000051 ORTHO05D000015 1.8e-07 59.7 149 29.5
C02p15340 Brassica napus HOM05D000051 ORTHO05D000015 1.8e-07 59.7 132 34.8
Carub.0008s1665 Capsella rubella HOM05D000051 ORTHO05D000015 1.8e-07 59.7 112 39.3
Thhalv10015540m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 1.8e-07 59.7 142 29.6
AT5G11370 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 2.3e-07 59.3 144 30.6
Carub.0008s1716 Capsella rubella HOM05D000051 ORTHO05D000015 2.3e-07 59.3 147 30.6
CARHR214030 Cardamine hirsuta HOM05D000051 ORTHO05D000015 2.3e-07 59.3 127 31.5
AL8G32130 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 3.0e-07 58.9 147 27.9
Carub.0008s1682 Capsella rubella HOM05D000051 ORTHO05D000015 3.0e-07 58.9 142 29.6
A02p09160 Brassica napus HOM05D000051 ORTHO05D000015 4.0e-07 58.5 144 28.5
A09p48470 Brassica napus HOM05D000051 ORTHO05D000015 4.0e-07 58.5 51 51.0
C02p15320 Brassica napus HOM05D000051 ORTHO05D000015 4.0e-07 58.5 145 29.7
BraA09t40299Z Brassica rapa HOM05D000051 ORTHO05D000015 4.0e-07 58.5 51 51.0
Carub.0007s3726 Capsella rubella HOM05D000051 ORTHO05D000015 4.0e-07 58.5 141 31.2
Sp1g38380 Schrenkiella parvula HOM05D000051 ORTHO05D000015 4.0e-07 58.5 143 28.0
BcaB01g00147 Brassica carinata HOM05D000051 ORTHO05D000015 5.2e-07 58.2 82 37.8
A03p20020 Brassica napus HOM05D000051 ORTHO05D000015 5.2e-07 58.2 135 29.6
Thhalv10010416m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 5.2e-07 58.2 54 46.3
AT4G15060 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 6.8e-07 57.8 156 30.8
A02p09120 Brassica napus HOM05D000051 ORTHO05D000015 6.8e-07 57.8 135 30.4
Carub.0008s2368 Capsella rubella HOM05D000051 ORTHO05D000015 6.8e-07 57.8 146 29.5
Thhalv10028332m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 6.8e-07 57.8 145 31.7
BcaB05g22266 Brassica carinata HOM05D000051 ORTHO05D000015 8.9e-07 57.4 136 28.7
A09p47850 Brassica napus HOM05D000051 ORTHO05D000015 8.9e-07 57.4 169 27.8
CARHR269940 Cardamine hirsuta HOM05D000051 ORTHO05D000015 8.9e-07 57.4 146 28.8
A02p08930 Brassica napus HOM05D000051 ORTHO05D000015 1.2e-06 57.0 106 33.0
C03p15750 Brassica napus HOM05D000051 ORTHO05D000015 1.2e-06 57.0 145 28.3
C07p54840 Brassica napus HOM05D000051 ORTHO05D000015 1.2e-06 57.0 69 43.5
A03p13450 Brassica napus HOM05D000051 ORTHO05D000015 1.5e-06 56.6 145 28.3
C02p15270 Brassica napus HOM05D000051 ORTHO05D000015 1.5e-06 56.6 135 30.4
BolC2t07644H Brassica oleracea HOM05D000051 ORTHO05D000015 1.5e-06 56.6 135 30.4
BraA02t05962Z Brassica rapa HOM05D000051 ORTHO05D000015 1.5e-06 56.6 106 32.1
BcaC07g37868 Brassica carinata HOM05D000051 ORTHO05D000015 2.0e-06 56.2 146 31.5
BolC8t48260H Brassica oleracea HOM05D000051 ORTHO05D000015 2.0e-06 56.2 146 31.5
BraA03t10652Z Brassica rapa HOM05D000051 ORTHO05D000015 2.0e-06 56.2 145 28.3
CARHR270020 Cardamine hirsuta HOM05D000051 ORTHO05D000015 2.0e-06 56.2 144 30.6
BraA04t16819Z Brassica rapa HOM05D000051 ORTHO05D000015 2.6e-06 55.8 144 31.2
Sp6g18240 Schrenkiella parvula HOM05D000051 ORTHO05D000015 2.6e-06 55.8 144 30.6
AL1G63730 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 3.4e-06 55.5 167 29.3
BcaC01g06427 Brassica carinata HOM05D000051 ORTHO05D000015 3.4e-06 55.5 144 29.9
A02p09150 Brassica napus HOM05D000051 ORTHO05D000015 3.4e-06 55.5 142 29.6
BolC8t50693H Brassica oleracea HOM05D000051 ORTHO05D000015 3.4e-06 55.5 105 30.5
BraA04t16288Z Brassica rapa HOM05D000051 ORTHO05D000015 3.4e-06 55.5 49 51.0
Thhalv10015729m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 3.4e-06 55.5 141 30.5
Sp6g18230 Schrenkiella parvula HOM05D000051 ORTHO05D000015 3.4e-06 55.5 140 32.1
Aa31LG3G12320 Aethionema arabicum HOM05D000051 ORTHO05D000015 4.4e-06 55.1 148 25.7
BcaB01g00146 Brassica carinata HOM05D000051 ORTHO05D000015 4.4e-06 55.1 52 46.2
BcaC07g39872 Brassica carinata HOM05D000051 ORTHO05D000015 4.4e-06 55.1 51 47.1
BolC7t45973H Brassica oleracea HOM05D000051 ORTHO05D000015 4.4e-06 55.1 69 42.0
BraA03t10647Z Brassica rapa HOM05D000051 ORTHO05D000015 4.4e-06 55.1 145 31.7
BraA09t40244Z Brassica rapa HOM05D000051 ORTHO05D000015 4.4e-06 55.1 144 29.9
Aa31LG3G5160 Aethionema arabicum HOM05D000051 ORTHO05D000015 5.7e-06 54.7 145 27.6
AL7G52020 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 5.7e-06 54.7 146 30.8
AT5G62970 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 5.7e-06 54.7 158 27.8
A09p47860 Brassica napus HOM05D000051 ORTHO05D000015 5.7e-06 54.7 100 33.0
C08p30110 Brassica napus HOM05D000051 ORTHO05D000015 5.7e-06 54.7 103 32.0
Sp6g18220 Schrenkiella parvula HOM05D000051 ORTHO05D000015 5.7e-06 54.7 144 27.8
BcaB01g00144 Brassica carinata HOM05D000051 ORTHO05D000015 7.5e-06 54.3 142 31.0
BcaNung02455 Brassica carinata HOM05D000051 ORTHO05D000015 7.5e-06 54.3 105 33.3
A09p48430 Brassica napus HOM05D000051 ORTHO05D000015 7.5e-06 54.3 109 31.2
BraA02t05979Z Brassica rapa HOM05D000051 ORTHO05D000015 7.5e-06 54.3 135 30.4
Carub.0001s3076 Capsella rubella HOM05D000051 ORTHO05D000015 7.5e-06 54.3 142 28.9
CARHR269730 Cardamine hirsuta HOM05D000051 ORTHO05D000015 7.5e-06 54.3 113 33.6
Aa31LG3G3830 Aethionema arabicum HOM05D000051 ORTHO05D000015 9.8e-06 53.9 144 29.2
BcaB01g00094 Brassica carinata HOM05D000051 ORTHO05D000015 9.8e-06 53.9 103 33.0
A10p13730 Brassica napus HOM05D000051 ORTHO05D000015 9.8e-06 53.9 139 29.5
C03p15840 Brassica napus HOM05D000051 ORTHO05D000015 9.8e-06 53.9 62 46.8
C04p45280 Brassica napus HOM05D000051 ORTHO05D000015 9.8e-06 53.9 144 30.6
C09p47880 Brassica napus HOM05D000051 ORTHO05D000015 9.8e-06 53.9 139 29.5
BolC3t14015H Brassica oleracea HOM05D000051 ORTHO05D000015 9.8e-06 53.9 62 46.8
BolC4t26111H Brassica oleracea HOM05D000051 ORTHO05D000015 9.8e-06 53.9 144 30.6
BolC9t55892H Brassica oleracea HOM05D000051 ORTHO05D000015 9.8e-06 53.9 139 29.5
CARHR269930 Cardamine hirsuta HOM05D000051 ORTHO05D000015 9.8e-06 53.9 142 31.7
Thhalv10009391m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 9.8e-06 53.9 53 47.2


User provided reference genes

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