Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g27977 Brassica carinata HOM05D008317 ORTHO05D010808 2.4e-101 372.1 179 100.0
BcaC02g08445 Brassica carinata HOM05D008317 ORTHO05D010808 9.9e-87 323.6 185 87.6
BraA04t17491Z Brassica rapa HOM05D008317 ORTHO05D010808 1.3e-78 296.6 206 75.7
C04p54130 Brassica napus HOM05D008317 ORTHO05D010808 2.8e-65 252.3 152 84.2
BolC4t26965H Brassica oleracea HOM05D008317 ORTHO05D010808 2.8e-65 252.3 152 84.2
BcaC07g40928 Brassica carinata HOM05D008317 ORTHO05D010808 1.4e-56 223.4 209 58.9
C08p39230 Brassica napus HOM05D008317 ORTHO05D010808 1.4e-56 223.4 209 58.9
A09p56280 Brassica napus HOM05D008317 ORTHO05D010808 5.3e-56 221.5 209 58.4
BolC8t51496H Brassica oleracea HOM05D008317 ORTHO05D010808 6.9e-56 221.1 209 58.4
BcaC07g40929 Brassica carinata HOM05D008317 ORTHO05D010808 2.0e-55 219.5 209 57.4
BraA09t41023Z Brassica rapa HOM05D008317 ORTHO05D010808 7.6e-55 217.6 209 58.4
A04p18900 Brassica napus HOM05D008317 ORTHO05D010808 4.6e-52 208.4 208 60.1
BraA04t17492Z Brassica rapa HOM05D008317 ORTHO05D010808 4.6e-52 208.4 210 59.0
C04p54070 Brassica napus HOM05D008317 ORTHO05D010808 3.0e-51 205.7 211 58.3
BcaB06g27971 Brassica carinata HOM05D008317 ORTHO05D010808 5.1e-51 204.9 211 56.4
BcaC02g08453 Brassica carinata HOM05D008317 ORTHO05D010808 6.7e-51 204.5 210 58.1
Sp4g03480 Schrenkiella parvula HOM05D008317 ORTHO05D010808 1.1e-50 203.8 207 59.4
BcaB06g27982 Brassica carinata HOM05D008317 ORTHO05D010808 1.3e-38 163.7 200 51.5
BraA04t17487Z Brassica rapa HOM05D008317 ORTHO05D010808 7.2e-37 157.9 188 53.2
A04p18780 Brassica napus HOM05D008317 ORTHO05D010808 1.0e-35 154.1 188 52.7
BcaB06g27976 Brassica carinata HOM05D008317 ORTHO05D010808 4.1e-32 142.1 67 98.5
BcaC02g08446 Brassica carinata HOM05D008317 ORTHO05D010808 4.1e-32 142.1 67 98.5
BolC4t26958H Brassica oleracea HOM05D008317 ORTHO05D010808 5.3e-32 141.7 130 65.4
A04p18820 Brassica napus HOM05D008317 ORTHO05D010808 2.3e-27 126.3 63 96.8
AL4G15690 Arabidopsis lyrata HOM05D008317 ORTHO05D010808 3.5e-23 112.5 203 39.9
AL4G18590 Arabidopsis lyrata HOM05D008317 ORTHO05D010808 1.3e-22 110.5 207 37.7
AT2G24480 Arabidopsis thaliana HOM05D008317 ORTHO05D010808 2.5e-21 106.3 201 37.3
BcaB06g27978 Brassica carinata HOM05D008317 ORTHO05D010808 1.0e-19 100.9 61 78.7
AT3G28620 Arabidopsis thaliana HOM05D008317 ORTHO05D010808 1.7e-17 93.6 214 34.6
Thhalv10003018m.g Eutrema salsugineum HOM05D008317 ORTHO05D010808 1.7e-17 93.6 196 36.2
Carub.0004s0382 Capsella rubella HOM05D008317 ORTHO05D010808 4.8e-17 92.0 197 37.6
AL4G14960 Arabidopsis lyrata HOM05D008317 ORTHO05D010808 2.4e-16 89.7 203 34.0
AL8G17380 Arabidopsis lyrata HOM05D008317 ORTHO05D010808 4.5e-15 85.5 200 33.0
AT3G42940 Arabidopsis thaliana HOM05D008317 ORTHO05D010808 1.0e-14 84.3 164 36.6
AT5G43200 Arabidopsis thaliana HOM05D008317 ORTHO05D010808 5.0e-14 82.0 209 34.0
AL4G14890 Arabidopsis lyrata HOM05D001404 ORTHO05D010808 8.0e-12 74.7 155 32.9
BraA09t41022Z Brassica rapa HOM05D015942 ORTHO05D015884 1.8e-11 73.6 192 31.2
A09p56270 Brassica napus HOM05D015942 ORTHO05D015884 4.0e-11 72.4 192 30.7
BcaC07g40927 Brassica carinata HOM05D015942 ORTHO05D015884 2.0e-07 60.1 153 34.6
C08p39220 Brassica napus HOM05D015942 ORTHO05D015884 2.0e-07 60.1 153 34.6
AT2G24285 Arabidopsis thaliana HOM05D008317 ORTHO05D010808 2.7e-07 59.7 108 39.8
BolC8t51495H Brassica oleracea HOM05D015942 ORTHO05D015884 4.5e-07 58.9 153 34.0
AL4G14950 Arabidopsis lyrata HOM05D008317 ORTHO05D010808 5.9e-07 58.5 82 34.1
AL4G14900 Arabidopsis lyrata HOM05D008317 ORTHO05D010808 3.8e-06 55.8 109 38.5


User provided reference genes

Program Settings