Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g27858 Brassica carinata HOM05D001224 ORTHO05D003542 6.4e-51 203.8 101 100.0
BcaB06g26726 Brassica carinata HOM05D001224 ORTHO05D003542 1.6e-30 136.0 69 94.2
BcaB01g01308 Brassica carinata HOM05D001224 ORTHO05D003542 1.5e-28 129.4 84 72.6
BcaB07g33216 Brassica carinata HOM05D001224 ORTHO05D003542 3.4e-28 128.3 71 87.3
BcaB06g27272 Brassica carinata HOM05D001224 ORTHO05D003542 5.0e-27 124.4 66 90.9
A01p20520 Brassica napus HOM05D001224 ORTHO05D003542 8.5e-27 123.6 85 68.2
A03p65930 Brassica napus HOM05D001224 ORTHO05D003542 2.5e-26 122.1 84 67.9
A08p09950 Brassica napus HOM05D001224 ORTHO05D003542 2.5e-26 122.1 84 67.9
BraA07t28348Z Brassica rapa HOM05D001224 ORTHO05D003542 2.5e-26 122.1 84 67.9
BraA08t32989Z Brassica rapa HOM05D001224 ORTHO05D003542 2.5e-26 122.1 84 67.9
C09p21160 Brassica napus HOM05D001224 ORTHO05D003542 3.2e-26 121.7 84 66.7
BolC9t55018H Brassica oleracea HOM05D001224 ORTHO05D003542 3.2e-26 121.7 84 66.7
BraA10t42919Z Brassica rapa HOM05D001224 ORTHO05D003542 4.2e-26 121.3 84 66.7
BcaB03g16496 Brassica carinata HOM05D001224 ORTHO05D003542 5.5e-26 120.9 84 69.0
BolC7t45418H Brassica oleracea HOM05D001224 ORTHO05D003542 7.2e-26 120.6 81 69.1
BolC9t57316H Brassica oleracea HOM05D001224 ORTHO05D003542 7.2e-26 120.6 85 67.1
BcaC09g48966 Brassica carinata HOM05D001224 ORTHO05D003542 9.4e-26 120.2 84 66.7
C03p65990 Brassica napus HOM05D001224 ORTHO05D003542 9.4e-26 120.2 84 66.7
C04p21370 Brassica napus HOM05D001224 ORTHO05D003542 9.4e-26 120.2 84 66.7
C07p49100 Brassica napus HOM05D001224 ORTHO05D003542 9.4e-26 120.2 84 66.7
C08p08880 Brassica napus HOM05D001224 ORTHO05D003542 9.4e-26 120.2 85 65.9
C09p27480 Brassica napus HOM05D001224 ORTHO05D003542 9.4e-26 120.2 84 66.7
C09p28480 Brassica napus HOM05D001224 ORTHO05D003542 9.4e-26 120.2 84 66.7
BolC3t17910H Brassica oleracea HOM05D001224 ORTHO05D003542 9.4e-26 120.2 85 65.9
BolC3t18859H Brassica oleracea HOM05D001224 ORTHO05D003542 9.4e-26 120.2 84 66.7
BolC6t36735H Brassica oleracea HOM05D001224 ORTHO05D003542 9.4e-26 120.2 84 66.7
A10p08840 Brassica napus HOM05D001224 ORTHO05D003542 1.2e-25 119.8 88 71.6
C01p44930 Brassica napus HOM05D001224 ORTHO05D003542 1.2e-25 119.8 84 66.7
C07p30720 Brassica napus HOM05D001224 ORTHO05D003542 1.6e-25 119.4 84 65.5
A05p28400 Brassica napus HOM05D001224 ORTHO05D003542 2.1e-25 119.0 88 70.5
C02p53510 Brassica napus HOM05D001224 ORTHO05D003542 2.1e-25 119.0 84 66.7
BcaC06g35692 Brassica carinata HOM05D001224 ORTHO05D003542 2.7e-25 118.6 88 70.5
A03p54410 Brassica napus HOM05D001224 ORTHO05D003542 2.7e-25 118.6 84 65.5
A10p06600 Brassica napus HOM05D001224 ORTHO05D003542 2.7e-25 118.6 88 70.5
C04p41850 Brassica napus HOM05D001224 ORTHO05D003542 2.7e-25 118.6 84 66.7
C07p01200 Brassica napus HOM05D001224 ORTHO05D003542 2.7e-25 118.6 88 70.5
BcaC08g44372 Brassica carinata HOM05D001224 ORTHO05D003542 3.6e-25 118.2 84 65.5
A01p26300 Brassica napus HOM05D001224 ORTHO05D003542 3.6e-25 118.2 88 69.3
C01p38690 Brassica napus HOM05D001224 ORTHO05D003542 3.6e-25 118.2 84 66.7
C07p01160 Brassica napus HOM05D001224 ORTHO05D003542 3.6e-25 118.2 88 70.5
BcaC05g25873 Brassica carinata HOM05D001224 ORTHO05D003542 4.6e-25 117.9 84 65.5
C01p30530 Brassica napus HOM05D001224 ORTHO05D003542 4.6e-25 117.9 84 65.5
BcaC02g09035 Brassica carinata HOM05D001224 ORTHO05D003542 7.9e-25 117.1 88 69.3
BcaC05g28168 Brassica carinata HOM05D001224 ORTHO05D003542 7.9e-25 117.1 88 69.3
A10p06840 Brassica napus HOM05D001224 ORTHO05D003542 7.9e-25 117.1 88 69.3
C05p42040 Brassica napus HOM05D001224 ORTHO05D003542 7.9e-25 117.1 88 69.3
C09p19450 Brassica napus HOM05D001224 ORTHO05D003542 7.9e-25 117.1 84 65.5
BolC6t35441H Brassica oleracea HOM05D001224 ORTHO05D003542 7.9e-25 117.1 88 69.3
BolC8t49591H Brassica oleracea HOM05D001224 ORTHO05D003542 7.9e-25 117.1 88 69.3
BcaC02g09113 Brassica carinata HOM05D001224 ORTHO05D003542 1.0e-24 116.7 84 64.3
BcaB07g33940 Brassica carinata HOM05D001224 ORTHO05D003542 1.4e-24 116.3 79 70.9
BcaC02g12295 Brassica carinata HOM05D001224 ORTHO05D003542 1.4e-24 116.3 88 69.3
BcaC06g35970 Brassica carinata HOM05D001224 ORTHO05D003542 1.4e-24 116.3 88 69.3
BraA09t40148Z Brassica rapa HOM05D001224 ORTHO05D003542 1.4e-24 116.3 88 69.3
A08p08840 Brassica napus HOM05D001224 ORTHO05D003542 1.8e-24 115.9 88 69.3
BcaC09g48839 Brassica carinata HOM05D001224 ORTHO05D003542 2.3e-24 115.5 88 68.2
BolC3t19483H Brassica oleracea HOM05D001224 ORTHO05D003542 2.3e-24 115.5 84 64.3
A08p09550 Brassica napus HOM05D001224 ORTHO05D003542 3.9e-24 114.8 88 69.3
BraA08t32952Z Brassica rapa HOM05D001224 ORTHO05D003542 3.9e-24 114.8 88 69.3
A07p02040 Brassica napus HOM05D001224 ORTHO05D003542 5.1e-24 114.4 84 64.3
C05p36110 Brassica napus HOM05D001224 ORTHO05D003542 5.1e-24 114.4 88 68.2
C05p45400 Brassica napus HOM05D001224 ORTHO05D003542 5.1e-24 114.4 88 69.3
C07p01240 Brassica napus HOM05D001224 ORTHO05D003542 5.1e-24 114.4 84 61.9
BcaC05g28453 Brassica carinata HOM05D001224 ORTHO05D003542 6.7e-24 114.0 88 68.2
C09p16570 Brassica napus HOM05D001224 ORTHO05D003542 8.8e-24 113.6 84 63.1
A03p54390 Brassica napus HOM05D001224 ORTHO05D003542 1.1e-23 113.2 88 68.2
C07p06930 Brassica napus HOM05D001224 ORTHO05D003542 1.1e-23 113.2 88 68.2
C05p18360 Brassica napus HOM05D001224 ORTHO05D003542 1.5e-23 112.8 88 68.2
BcaC05g27785 Brassica carinata HOM05D001224 ORTHO05D003542 2.0e-23 112.5 88 67.0
BcaC09g48602 Brassica carinata HOM05D001224 ORTHO05D001170 2.0e-23 112.5 88 67.0
C05p37790 Brassica napus HOM05D001224 ORTHO05D003542 2.0e-23 112.5 88 67.0
BolC1t04761H Brassica oleracea HOM05D001224 ORTHO05D003542 2.0e-23 112.5 88 67.0
BolC4t22583H Brassica oleracea HOM05D001224 ORTHO05D003542 3.3e-23 111.7 84 63.1
BolC5t32335H Brassica oleracea HOM05D001224 ORTHO05D003542 3.3e-23 111.7 88 65.9
BolC6t36796H Brassica oleracea HOM05D001224 ORTHO05D003542 3.3e-23 111.7 88 65.9
C04p09750 Brassica napus HOM05D001224 ORTHO05D003542 4.3e-23 111.3 84 61.9
BraA01t02476Z Brassica rapa HOM05D001224 ORTHO05D003542 4.3e-23 111.3 86 67.4
BolC7t43617H Brassica oleracea HOM05D001224 ORTHO05D003542 5.7e-23 110.9 84 64.3
BolC3t20360H Brassica oleracea HOM05D001224 ORTHO05D003542 7.4e-23 110.5 92 65.2
BraA03t14504Z Brassica rapa HOM05D001224 ORTHO05D003542 9.7e-23 110.2 88 67.0
BraA03t14506Z Brassica rapa HOM05D001224 ORTHO05D003542 9.7e-23 110.2 78 67.9
C06p04840 Brassica napus HOM05D001224 ORTHO05D003542 1.3e-22 109.8 88 67.0
C06p05150 Brassica napus HOM05D001224 ORTHO05D003542 1.7e-22 109.4 84 60.7
BolC4t23824H Brassica oleracea HOM05D001224 ORTHO05D003542 2.2e-22 109.0 84 61.9
BolC1t03177H Brassica oleracea HOM05D001224 ORTHO05D003542 3.7e-22 108.2 74 73.0
BolC6t38483H Brassica oleracea HOM05D001224 ORTHO05D003542 1.4e-21 106.3 84 60.7
BcaB06g26818 Brassica carinata HOM05D001224 ORTHO05D003542 5.3e-21 104.4 63 76.2
BcaC08g44057 Brassica carinata HOM05D001224 ORTHO05D003542 9.1e-21 103.6 84 58.3
C08p06680 Brassica napus HOM05D001224 ORTHO05D003542 5.9e-20 100.9 71 67.6
BcaB04g18313 Brassica carinata HOM05D001224 ORTHO05D003542 2.2e-19 99.0 66 69.7
C04p47860 Brassica napus HOM05D001224 ORTHO05D003542 2.9e-19 98.6 66 72.7
C07p08890 Brassica napus HOM05D001224 ORTHO05D003542 3.8e-19 98.2 92 52.2
BolC6t36240H Brassica oleracea HOM05D001224 ORTHO05D003542 5.0e-19 97.8 72 63.9
BcaC06g36018 Brassica carinata HOM05D001224 ORTHO05D003542 6.5e-19 97.4 82 57.3
BcaC06g36232 Brassica carinata HOM05D001224 ORTHO05D003542 6.5e-19 97.4 84 59.5
C07p06200 Brassica napus HOM05D001224 ORTHO05D003542 6.5e-19 97.4 84 59.5
BolC7t41037H Brassica oleracea HOM05D001224 ORTHO05D003542 6.5e-19 97.4 84 59.5
A01p25430 Brassica napus HOM05D001224 ORTHO05D003542 8.5e-19 97.1 64 75.0
BraA01t03049Z Brassica rapa HOM05D001224 ORTHO05D003542 8.5e-19 97.1 72 63.9
BolC3t18910H Brassica oleracea HOM05D001224 ORTHO05D003542 1.1e-18 96.7 98 57.1
BraSC37t46117Z Brassica rapa HOM05D001224 ORTHO05D003542 1.1e-18 96.7 59 83.1
BcaB01g01478 Brassica carinata HOM05D001224 ORTHO05D003542 1.4e-18 96.3 85 55.3
BolC7t41301H Brassica oleracea HOM05D001224 ORTHO05D003542 1.4e-18 96.3 92 51.1
BolC4t22584H Brassica oleracea HOM05D001224 ORTHO05D003542 9.4e-18 93.6 84 57.1
C01p45370 Brassica napus HOM05D001224 ORTHO05D001170 1.2e-17 93.2 70 68.6
C03p56220 Brassica napus HOM05D001224 ORTHO05D003542 1.2e-17 93.2 63 66.7
C07p05290 Brassica napus HOM05D001224 ORTHO05D003542 2.1e-17 92.4 84 53.6
C09p42280 Brassica napus HOM05D001224 ORTHO05D003542 2.1e-17 92.4 84 53.6
BolC7t40929H Brassica oleracea HOM05D001224 ORTHO05D003542 2.1e-17 92.4 84 53.6
BolC9t57106H Brassica oleracea HOM05D001224 ORTHO05D003542 2.1e-17 92.4 84 53.6
C02p39450 Brassica napus HOM05D001224 ORTHO05D003542 4.7e-17 91.3 84 52.4
C04p20870 Brassica napus HOM05D001224 ORTHO05D003542 4.7e-17 91.3 85 52.9
BolC2t09958H Brassica oleracea HOM05D001224 ORTHO05D003542 4.7e-17 91.3 84 52.4
C01p38780 Brassica napus HOM05D001224 ORTHO05D003542 7.9e-17 90.5 84 52.4
BolC1t03835H Brassica oleracea HOM05D001224 ORTHO05D003542 7.9e-17 90.5 84 52.4
BcaB04g16981 Brassica carinata HOM05D001224 ORTHO05D003542 1.4e-16 89.7 68 64.7
BolC9t57424H Brassica oleracea HOM05D001224 ORTHO05D003542 1.4e-16 89.7 85 54.1
C03p71060 Brassica napus HOM05D001224 ORTHO05D003542 1.8e-16 89.4 85 51.8
BolC3t19389H Brassica oleracea HOM05D001224 ORTHO05D003542 1.8e-16 89.4 85 51.8
BolC4t23825H Brassica oleracea HOM05D001224 ORTHO05D003542 3.0e-16 88.6 84 54.8
BolC3t18885H Brassica oleracea HOM05D001224 ORTHO05D003542 8.8e-16 87.0 67 62.7
C03p75870 Brassica napus HOM05D001224 ORTHO05D003542 2.0e-15 85.9 64 64.1
C05p44750 Brassica napus HOM05D001224 ORTHO05D003542 2.0e-15 85.9 64 64.1
BolC4t25126H Brassica oleracea HOM05D001224 ORTHO05D003542 2.6e-15 85.5 84 48.8
C07p12000 Brassica napus HOM05D001224 ORTHO05D003542 3.3e-15 85.1 75 62.7
BolC7t41036H Brassica oleracea HOM05D001224 ORTHO05D003542 3.3e-15 85.1 85 51.8
BraA06t25781Z Brassica rapa HOM05D001224 ORTHO05D003542 3.3e-15 85.1 85 50.6
BraA07t28368Z Brassica rapa HOM05D001224 ORTHO05D003542 3.3e-15 85.1 75 62.7
BcaB07g33756 Brassica carinata HOM05D001498 ORTHO05D003542 4.4e-15 84.7 39 94.9
C05p25310 Brassica napus HOM05D001224 ORTHO05D003542 4.4e-15 84.7 78 55.1
C05p27340 Brassica napus HOM05D001224 ORTHO05D001170 4.4e-15 84.7 70 67.1
BraA10t42920Z Brassica rapa HOM05D001224 ORTHO05D003542 5.7e-15 84.3 90 55.6
BolC9t59177H Brassica oleracea HOM05D001224 ORTHO05D003542 9.7e-15 83.6 75 61.3
BcaB04g17427 Brassica carinata HOM05D001224 ORTHO05D003542 1.3e-14 83.2 55 78.2
C07p00680 Brassica napus HOM05D001224 ORTHO05D003542 1.3e-14 83.2 75 61.3
BolC5t31446H Brassica oleracea HOM05D001224 ORTHO05D003542 1.3e-14 83.2 70 65.7
BcaB02g11181 Brassica carinata HOM05D001224 ORTHO05D003542 2.2e-14 82.4 69 59.4
A06p28380 Brassica napus HOM05D001224 ORTHO05D003542 2.2e-14 82.4 76 52.6
C04p55400 Brassica napus HOM05D001224 ORTHO05D003542 2.2e-14 82.4 75 61.3
BolC5t31268H Brassica oleracea HOM05D001224 ORTHO05D003542 2.2e-14 82.4 69 62.3
C04p05510 Brassica napus HOM05D001224 ORTHO05D003542 2.8e-14 82.0 75 61.3
A09p33390 Brassica napus HOM05D001224 ORTHO05D003542 3.7e-14 81.6 55 70.9
BraA07t28539Z Brassica rapa HOM05D001224 ORTHO05D003542 6.3e-14 80.9 75 53.3
BolC5t33263H Brassica oleracea HOM05D001224 ORTHO05D003542 1.1e-13 80.1 75 60.0
C04p09870 Brassica napus HOM05D001224 ORTHO05D003542 1.8e-13 79.3 74 54.1
BolC4t22595H Brassica oleracea HOM05D001224 ORTHO05D003542 1.8e-13 79.3 74 54.1
C04p09860 Brassica napus HOM05D001224 ORTHO05D003542 3.1e-13 78.6 68 58.8
BolC4t22594H Brassica oleracea HOM05D001224 ORTHO05D003542 3.1e-13 78.6 68 58.8
BcaC07g39107 Brassica carinata HOM05D001224 ORTHO05D003542 4.1e-13 78.2 84 48.8
BcaB07g32746 Brassica carinata HOM05D001224 ORTHO05D003542 5.3e-13 77.8 64 56.2
A01p28530 Brassica napus HOM05D002776 ORTHO05D003044 5.3e-13 77.8 50 70.0
BcaC02g09777 Brassica carinata HOM05D001224 ORTHO05D003542 7.0e-13 77.4 84 47.6
C03p58290 Brassica napus HOM05D001224 ORTHO05D003542 9.1e-13 77.0 70 61.4
A10p06580 Brassica napus HOM05D002776 ORTHO05D000395 2.0e-12 75.9 49 69.4
C03p44580 Brassica napus HOM05D002776 ORTHO05D003044 2.0e-12 75.9 50 68.0
C03p66380 Brassica napus HOM05D002776 ORTHO05D003044 2.0e-12 75.9 50 68.0
C05p34940 Brassica napus HOM05D001224 ORTHO05D003542 2.0e-12 75.9 55 65.5
C01p48980 Brassica napus HOM05D002776 ORTHO05D003542 2.6e-12 75.5 63 55.6
C07p07600 Brassica napus HOM05D001224 ORTHO05D003542 4.5e-12 74.7 59 64.4
BolC2t11289H Brassica oleracea HOM05D002776 ORTHO05D003044 4.5e-12 74.7 50 68.0
BolC7t41181H Brassica oleracea HOM05D001224 ORTHO05D003542 4.5e-12 74.7 59 64.4
BcaC06g36118 Brassica carinata HOM05D001224 ORTHO05D003542 2.2e-11 72.4 59 62.7
BcaC09g49195 Brassica carinata HOM05D001224 ORTHO05D003542 6.5e-11 70.9 44 79.5
BcaC05g27630 Brassica carinata HOM05D001224 ORTHO05D001170 8.5e-11 70.5 50 72.0
BcaB04g17783 Brassica carinata HOM05D001224 ORTHO05D003542 1.5e-10 69.7 82 39.0
BcaC05g27626 Brassica carinata HOM05D001224 ORTHO05D003542 1.5e-10 69.7 48 75.0
BcaC05g27627 Brassica carinata HOM05D001224 ORTHO05D003542 1.5e-10 69.7 48 75.0
C01p34330 Brassica napus HOM05D001224 ORTHO05D023838 3.2e-10 68.6 61 55.7
BolC1t03403H Brassica oleracea HOM05D001224 ORTHO05D023838 3.2e-10 68.6 61 55.7
C04p56090 Brassica napus HOM05D002776 ORTHO05D003044 4.2e-10 68.2 52 55.8
BcaB02g11315 Brassica carinata HOM05D001498 ORTHO05D008559 5.5e-10 67.8 42 78.6
BolC4t26386H Brassica oleracea HOM05D001224 ORTHO05D003542 5.5e-10 67.8 75 56.0
A01p26690 Brassica napus HOM05D001224 ORTHO05D003542 2.1e-09 65.9 49 61.2
C07p38500 Brassica napus HOM05D001224 ORTHO05D003542 2.1e-09 65.9 44 68.2
A01p28550 Brassica napus HOM05D001224 ORTHO05D003542 6.1e-09 64.3 40 80.0
BraA04t16781Z Brassica rapa HOM05D001224 ORTHO05D023838 1.8e-08 62.8 61 50.8
BcaC08g43734 Brassica carinata HOM05D001224 ORTHO05D003542 2.3e-08 62.4 53 54.7
BraA01t03047Z Brassica rapa HOM05D001224 ORTHO05D003542 2.3e-08 62.4 40 77.5
C05p25300 Brassica napus HOM05D001224 ORTHO05D003542 3.0e-08 62.0 50 54.0
BolC5t31267H Brassica oleracea HOM05D001224 ORTHO05D003542 3.0e-08 62.0 50 54.0
BolC8t49068H Brassica oleracea HOM05D001224 ORTHO05D003542 4.0e-08 61.6 42 64.3
BolC6t37490H Brassica oleracea HOM05D001224 ORTHO05D003542 1.5e-07 59.7 40 65.0
BolC7t41112H Brassica oleracea HOM05D001224 ORTHO05D003542 1.5e-07 59.7 41 68.3
BcaB02g11188 Brassica carinata HOM05D001224 ORTHO05D003542 5.7e-07 57.8 56 51.8
BolC6t37506H Brassica oleracea HOM05D001224 ORTHO05D003542 9.7e-07 57.0 41 61.0
BraA09t38882Z Brassica rapa HOM05D001224 ORTHO05D003542 1.3e-06 56.6 41 63.4
BcaC02g11925 Brassica carinata HOM05D001224 ORTHO05D003542 4.8e-06 54.7 49 55.1
BcaB07g33138 Brassica carinata HOM05D001224 ORTHO05D003542 8.2e-06 53.9 43 60.5


User provided reference genes

Program Settings