Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g27850 Brassica carinata HOM05D001224 ORTHO05D016074 7.6e-130 467.2 247 100.0
BcaB02g11183 Brassica carinata HOM05D001224 ORTHO05D016074 2.6e-69 266.2 259 66.0
BcaB06g25737 Brassica carinata HOM05D001224 ORTHO05D016074 2.6e-69 266.2 176 83.5
BcaB05g24682 Brassica carinata HOM05D001224 ORTHO05D016074 2.0e-66 256.5 331 55.0
BcaB04g17705 Brassica carinata HOM05D001224 ORTHO05D016074 2.0e-61 240.0 124 100.0
BcaB06g25741 Brassica carinata HOM05D001224 ORTHO05D016074 3.0e-57 226.1 146 82.2
BcaB08g35078 Brassica carinata HOM05D001224 ORTHO05D016074 1.5e-56 223.8 194 67.5
BcaB06g26645 Brassica carinata HOM05D001224 ORTHO05D010571 6.4e-52 208.4 175 68.6
BcaB04g17772 Brassica carinata HOM05D001224 ORTHO05D010571 1.1e-48 197.6 154 74.7
BcaB05g22948 Brassica carinata HOM05D001224 ORTHO05D010571 3.1e-46 189.5 208 56.2
BcaB04g17704 Brassica carinata HOM05D001224 ORTHO05D096088 2.5e-40 169.9 90 98.9
BcaB06g26684 Brassica carinata HOM05D001224 ORTHO05D010571 1.6e-39 167.2 94 94.7
BcaB05g22878 Brassica carinata HOM05D001224 ORTHO05D018563 5.8e-37 158.7 174 55.7
BcaB02g11463 Brassica carinata HOM05D001224 ORTHO05D000309 2.5e-32 143.3 233 41.6
BcaB06g27136 Brassica carinata HOM05D001224 ORTHO05D094773 8.1e-31 138.3 173 55.5
BcaB01g02585 Brassica carinata HOM05D001224 ORTHO05D000395 1.1e-30 137.9 201 44.8
C05p30230 Brassica napus HOM05D001224 ORTHO05D010571 1.2e-29 134.4 267 40.4
C01p41550 Brassica napus HOM05D001224 ORTHO05D010571 4.5e-29 132.5 227 41.4
BolC7t41307H Brassica oleracea HOM05D001224 ORTHO05D010571 1.7e-28 130.6 247 42.1
BcaB02g11218 Brassica carinata HOM05D001224 ORTHO05D010571 4.9e-28 129.0 198 44.4
A01p25420 Brassica napus HOM05D001224 ORTHO05D014478 6.4e-28 128.6 240 41.7
C01p45400 Brassica napus HOM05D001224 ORTHO05D010571 8.4e-28 128.3 257 40.1
C05p36130 Brassica napus HOM05D001224 ORTHO05D010571 8.4e-28 128.3 259 39.8
BcaB06g27207 Brassica carinata HOM05D001224 ORTHO05D019989 1.1e-27 127.9 188 43.1
BraA03t15283Z Brassica rapa HOM05D001224 ORTHO05D010571 1.1e-27 127.9 237 40.9
C03p58300 Brassica napus HOM05D001224 ORTHO05D010571 2.4e-27 126.7 255 40.4
BcaB06g26507 Brassica carinata HOM05D001224 ORTHO05D010571 4.2e-27 125.9 186 50.5
C01p48020 Brassica napus HOM05D001224 ORTHO05D010571 4.2e-27 125.9 248 39.9
BcaC02g09037 Brassica carinata HOM05D001224 ORTHO05D014478 5.5e-27 125.6 202 43.6
BcaC06g36171 Brassica carinata HOM05D001224 ORTHO05D014478 7.1e-27 125.2 207 43.5
C02p15640 Brassica napus HOM05D001224 ORTHO05D010571 7.1e-27 125.2 201 43.8
A08p08810 Brassica napus HOM05D001224 ORTHO05D010571 9.3e-27 124.8 247 40.9
BolC5t33158H Brassica oleracea HOM05D001224 ORTHO05D010571 1.2e-26 124.4 255 40.0
BcaB06g26475 Brassica carinata HOM05D001224 ORTHO05D093826 1.6e-26 124.0 69 95.7
BcaC05g27135 Brassica carinata HOM05D001224 ORTHO05D010571 2.1e-26 123.6 219 41.1
BcaC01g02927 Brassica carinata HOM05D001224 ORTHO05D014478 3.5e-26 122.9 207 43.0
C05p44360 Brassica napus HOM05D001224 ORTHO05D014478 3.5e-26 122.9 237 40.5
C07p01220 Brassica napus HOM05D001224 ORTHO05D010571 7.9e-26 121.7 247 39.7
BolC8t47204H Brassica oleracea HOM05D001224 ORTHO05D010571 1.3e-25 120.9 218 40.8
BcaB04g16976 Brassica carinata HOM05D001224 ORTHO05D016074 2.3e-25 120.2 150 50.0
BcaB08g35070 Brassica carinata HOM05D001224 ORTHO05D010571 3.0e-25 119.8 157 48.4
BolC5t30546H Brassica oleracea HOM05D001224 ORTHO05D010571 3.9e-25 119.4 198 43.4
C05p37780 Brassica napus HOM05D001224 ORTHO05D010571 1.5e-24 117.5 187 42.8
BcaC08g43834 Brassica carinata HOM05D001224 ORTHO05D014478 1.9e-24 117.1 202 42.1
BcaB06g27848 Brassica carinata HOM05D001224 ORTHO05D094661 3.3e-24 116.3 164 54.3
A10p08880 Brassica napus HOM05D001224 ORTHO05D010571 5.6e-24 115.5 206 41.3
C06p04810 Brassica napus HOM05D001224 ORTHO05D010571 7.4e-24 115.2 211 40.3
BcaC07g37040 Brassica carinata HOM05D001224 ORTHO05D010571 9.6e-24 114.8 195 43.6
BcaC02g12294 Brassica carinata HOM05D001224 ORTHO05D014478 3.7e-23 112.8 202 40.6
BcaC02g11120 Brassica carinata HOM05D001224 ORTHO05D010571 8.1e-23 111.7 194 42.3
BcaB05g24223 Brassica carinata HOM05D001224 ORTHO05D019989 1.4e-22 110.9 180 41.1
C04p05530 Brassica napus HOM05D001224 ORTHO05D010571 1.8e-22 110.5 264 37.5
BcaC05g26849 Brassica carinata HOM05D001224 ORTHO05D014478 4.0e-22 109.4 190 41.6
BcaB04g17592 Brassica carinata HOM05D001224 ORTHO05D016074 3.4e-21 106.3 126 50.8
C07p06970 Brassica napus HOM05D001224 ORTHO05D010571 7.6e-21 105.1 154 45.5
BcaB04g18801 Brassica carinata HOM05D001224 ORTHO05D093562 3.8e-20 102.8 271 37.6
BcaC08g44195 Brassica carinata HOM05D001224 ORTHO05D014478 3.8e-20 102.8 195 40.0
BcaC05g27629 Brassica carinata HOM05D001224 ORTHO05D010571 1.1e-19 101.3 102 54.9
BcaC03g17086 Brassica carinata HOM05D001224 ORTHO05D010571 1.4e-19 100.9 185 42.7
BcaB06g26681 Brassica carinata HOM05D001224 ORTHO05D016739 1.9e-19 100.5 137 45.3
C07p08920 Brassica napus HOM05D001224 ORTHO05D010571 9.3e-19 98.2 245 38.0
BcaB05g23791 Brassica carinata HOM05D001224 ORTHO05D010571 2.1e-18 97.1 84 58.3
BcaC05g27783 Brassica carinata HOM05D001224 ORTHO05D000395 2.1e-18 97.1 218 35.3
BcaC05g28451 Brassica carinata HOM05D001224 ORTHO05D014478 2.1e-18 97.1 202 38.6
BcaC06g35617 Brassica carinata HOM05D001224 ORTHO05D016739 2.1e-18 97.1 183 40.4
BcaC07g37922 Brassica carinata HOM05D001224 ORTHO05D016739 3.5e-18 96.3 162 42.6
BolC5t31762H Brassica oleracea HOM05D001224 ORTHO05D010571 4.6e-18 95.9 106 50.0
BcaB05g22583 Brassica carinata HOM05D001224 ORTHO05D016074 1.8e-17 94.0 119 58.0
BcaB07g33162 Brassica carinata HOM05D012943 ORTHO05D010571 8.7e-17 91.7 200 37.0
A09p21550 Brassica napus HOM05D023185 ORTHO05D012331 2.1e-15 87.0 217 33.2
C01p38730 Brassica napus HOM05D001224 ORTHO05D012331 2.1e-15 87.0 222 32.0
BraA09t37754Z Brassica rapa HOM05D001224 ORTHO05D012331 3.7e-15 86.3 206 33.5
BcaB03g16206 Brassica carinata HOM05D001224 ORTHO05D010571 1.1e-14 84.7 192 35.4
BcaB04g16977 Brassica carinata HOM05D001224 ORTHO05D010571 1.1e-14 84.7 75 66.7
C05p36970 Brassica napus HOM05D001224 ORTHO05D024276 3.1e-14 83.2 197 33.5
BcaB07g33904 Brassica carinata HOM05D001224 ORTHO05D003044 5.3e-14 82.4 148 39.9
C09p42330 Brassica napus HOM05D001224 ORTHO05D012331 5.3e-14 82.4 222 31.5
C07p12920 Brassica napus HOM05D001224 ORTHO05D016739 6.9e-14 82.0 189 37.6
C07p13910 Brassica napus HOM05D001224 ORTHO05D012331 6.9e-14 82.0 207 32.4
C04p55410 Brassica napus HOM05D001224 ORTHO05D010571 9.0e-14 81.6 105 46.7
BcaC02g09920 Brassica carinata HOM05D001224 ORTHO05D014478 1.2e-13 81.3 144 38.2
BcaB01g01183 Brassica carinata HOM05D001224 ORTHO05D019989 1.5e-13 80.9 127 43.3
BcaB08g35157 Brassica carinata HOM05D001224 ORTHO05D010571 1.5e-13 80.9 165 37.6
BcaC05g27713 Brassica carinata HOM05D001224 ORTHO05D024276 2.6e-13 80.1 122 41.8
BolC4t26388H Brassica oleracea HOM05D001224 ORTHO05D000395 4.5e-13 79.3 67 59.7
BcaB05g22438 Brassica carinata HOM05D001224 ORTHO05D095127 5.9e-13 79.0 144 45.1
BolC4t23819H Brassica oleracea HOM05D002776 ORTHO05D000395 5.9e-13 79.0 129 38.0
C07p01190 Brassica napus HOM05D001224 ORTHO05D000395 1.0e-12 78.2 89 49.4
BolC1t04759H Brassica oleracea HOM05D001224 ORTHO05D010571 5.0e-12 75.9 67 58.2
A09p32050 Brassica napus HOM05D001224 ORTHO05D016111 8.4e-12 75.1 176 33.5
BraSC37t46113Z Brassica rapa HOM05D000675 ORTHO05D000395 8.4e-12 75.1 81 49.4
BcaB06g26650 Brassica carinata HOM05D001224 ORTHO05D010571 1.4e-11 74.3 145 38.6
BolC4t22590H Brassica oleracea HOM05D002776 ORTHO05D016111 7.2e-11 72.0 205 30.7
BolC5t32442H Brassica oleracea HOM05D001224 ORTHO05D024276 1.6e-10 70.9 175 33.7
BcaB01g01037 Brassica carinata HOM05D001224 ORTHO05D010571 1.3e-09 67.8 234 30.8
BcaC04g19844 Brassica carinata HOM05D001224 ORTHO05D012331 1.8e-09 67.4 215 30.7
BcaB05g24508 Brassica carinata HOM05D001224 ORTHO05D000309 2.3e-09 67.0 69 52.2
BolC3t19387H Brassica oleracea HOM05D001224 ORTHO05D016111 2.3e-09 67.0 205 30.2
BraA01t02478Z Brassica rapa HOM05D001224 ORTHO05D010571 2.3e-09 67.0 50 64.0
BcaB06g26317 Brassica carinata HOM05D001224 ORTHO05D010571 1.3e-07 61.2 66 51.5
BcaC06g36017 Brassica carinata HOM05D001224 ORTHO05D016739 3.7e-07 59.7 83 45.8
BcaB03g16627 Brassica carinata HOM05D001224 ORTHO05D018563 4.8e-07 59.3 55 60.0
C03p64930 Brassica napus HOM05D002776 ORTHO05D000395 6.3e-07 58.9 149 33.6
BcaB02g11518 Brassica carinata HOM05D001224 ORTHO05D000395 8.2e-07 58.5 50 66.0
BcaB04g17782 Brassica carinata HOM05D012943 ORTHO05D091829 8.2e-07 58.5 143 32.9
BcaB03g16625 Brassica carinata HOM05D001224 ORTHO05D095114 1.1e-06 58.2 68 47.1
BcaB04g17600 Brassica carinata HOM05D001224 ORTHO05D093893 1.1e-06 58.2 100 47.0
BcaB08g35462 Brassica carinata HOM05D001224 ORTHO05D016074 1.8e-06 57.4 31 93.5
BolC4t22579H Brassica oleracea HOM05D002776 ORTHO05D024276 5.3e-06 55.8 83 39.8


User provided reference genes

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