Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g27836 Brassica carinata HOM05D000249 ORTHO05D000206 3.2e-77 291.6 137 100.0
BcaNung03371 Brassica carinata HOM05D000249 ORTHO05D000206 3.3e-42 175.3 86 90.7
A03p62720 Brassica napus HOM05D000249 ORTHO05D000206 1.4e-40 169.9 85 88.2
A03p62710 Brassica napus HOM05D000249 ORTHO05D000206 1.2e-36 156.8 89 79.8
BraA03t15347Z Brassica rapa HOM05D000249 ORTHO05D000206 1.1e-34 150.2 81 85.2
BolC7t46468H Brassica oleracea HOM05D000249 ORTHO05D000206 1.1e-32 143.7 100 70.0
C07p60270 Brassica napus HOM05D000249 ORTHO05D000206 7.0e-32 141.0 100 69.0
A01p06470 Brassica napus HOM05D000249 ORTHO05D000206 1.2e-12 77.0 82 42.7
BraA01t00608Z Brassica rapa HOM05D000249 ORTHO05D000206 1.2e-12 77.0 82 42.7
Sp7g36320 Schrenkiella parvula HOM05D000249 ORTHO05D000206 3.6e-12 75.5 85 44.7
Carub.0002s0800 Capsella rubella HOM05D000249 ORTHO05D000206 4.7e-12 75.1 92 44.6
AL6G46460 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 1.4e-11 73.6 82 42.7
Carub.0007s0257 Capsella rubella HOM05D000249 ORTHO05D000206 1.4e-11 73.6 82 41.5
AL3G20980 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 1.8e-11 73.2 83 47.0
AL7G18890 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 3.0e-11 72.4 85 42.4
Thhalv10002581m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 3.0e-11 72.4 82 45.1
AT4G11770 Arabidopsis thaliana HOM05D000249 ORTHO05D000206 4.0e-11 72.0 85 40.0
Thhalv10029230m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 5.2e-11 71.6 91 44.0
Thhalv10025597m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 6.8e-11 71.2 80 43.8
AL34U10050 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 8.8e-11 70.9 81 43.2
CARHR247140 Cardamine hirsuta HOM05D000249 ORTHO05D000206 8.8e-11 70.9 85 42.4
Thhalv10029372m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 8.8e-11 70.9 75 46.7
Carub.0006s3084 Capsella rubella HOM05D000249 ORTHO05D000206 1.2e-10 70.5 92 39.1
Sp7g36330 Schrenkiella parvula HOM05D000249 ORTHO05D000206 1.2e-10 70.5 82 42.7
AT3G43710 Arabidopsis thaliana HOM05D000249 ORTHO05D000206 1.5e-10 70.1 86 36.0
AL9U11020 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 2.0e-10 69.7 85 40.0
Carub.0008s0875 Capsella rubella HOM05D000249 ORTHO05D000206 2.0e-10 69.7 96 39.6
Carub.0008s0880 Capsella rubella HOM05D000249 ORTHO05D000206 2.0e-10 69.7 85 43.5
Carub.0002s0795 Capsella rubella HOM05D000249 ORTHO05D000206 2.6e-10 69.3 99 39.4
Carub.0008s0877 Capsella rubella HOM05D000249 ORTHO05D000206 2.6e-10 69.3 78 43.6
AL6G47540 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 3.4e-10 68.9 82 41.5
AT1G61540 Arabidopsis thaliana HOM05D000249 ORTHO05D000206 3.4e-10 68.9 90 37.8
BcaNung05811 Brassica carinata HOM05D000249 ORTHO05D000206 3.4e-10 68.9 82 41.5
BolC1t00060H Brassica oleracea HOM05D000249 ORTHO05D000206 3.4e-10 68.9 82 41.5
Thhalv10009365m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 3.4e-10 68.9 91 40.7
Sp3g20980 Schrenkiella parvula HOM05D000249 ORTHO05D000206 3.4e-10 68.9 82 41.5
AL1G52760 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 4.4e-10 68.6 91 37.4
C01p50630 Brassica napus HOM05D000249 ORTHO05D041086 4.4e-10 68.6 88 38.6
BolC1t05012H Brassica oleracea HOM05D000249 ORTHO05D041086 4.4e-10 68.6 88 38.6
Carub.0005s2133 Capsella rubella HOM05D000249 ORTHO05D000206 4.4e-10 68.6 82 37.8
AL1G38150 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 5.7e-10 68.2 82 42.7
AL2G17690 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 5.7e-10 68.2 96 34.4
AL34U10120 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 5.7e-10 68.2 86 44.2
AL7G51660 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 5.7e-10 68.2 77 41.6
C04p42830 Brassica napus HOM05D000249 ORTHO05D000206 5.7e-10 68.2 76 46.1
BolC4t25849H Brassica oleracea HOM05D000249 ORTHO05D000206 5.7e-10 68.2 76 46.1
AL34U10040 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 7.5e-10 67.8 78 44.9
AL3G21170 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 7.5e-10 67.8 94 43.6
AL3G53350 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 7.5e-10 67.8 93 41.9
AL8G23920 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 7.5e-10 67.8 75 48.0
AT4G11750 Arabidopsis thaliana HOM05D000249 ORTHO05D000206 7.5e-10 67.8 82 41.5
Carub.0263s0001 Capsella rubella HOM05D000249 ORTHO05D000206 7.5e-10 67.8 96 37.5
AL7G11700 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 9.8e-10 67.4 82 42.7
AT4G11745 Arabidopsis thaliana HOM05D000249 ORTHO05D000206 9.8e-10 67.4 85 40.0
AT4G33900 Arabidopsis thaliana HOM05D000249 ORTHO05D000206 9.8e-10 67.4 81 40.7
Carub.0008s0845 Capsella rubella HOM05D000249 ORTHO05D000206 9.8e-10 67.4 78 42.3
Carub.0008s0878 Capsella rubella HOM05D000249 ORTHO05D000206 9.8e-10 67.4 78 42.3
AL2G28800 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 1.3e-09 67.0 82 37.8
AL7G11690 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 1.3e-09 67.0 82 43.9
C09p45560 Brassica napus HOM05D000249 ORTHO05D024135 1.3e-09 67.0 81 39.5
CARHR221070 Cardamine hirsuta HOM05D000249 ORTHO05D000206 1.3e-09 67.0 85 40.0
CARHR254600 Cardamine hirsuta HOM05D000249 ORTHO05D000206 1.3e-09 67.0 97 40.2
Thhalv10009983m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 1.3e-09 67.0 82 36.6
AL1G52750 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 1.7e-09 66.6 91 39.6
AL7G51860 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 1.7e-09 66.6 82 46.3
AT5G48990 Arabidopsis thaliana HOM05D000249 ORTHO05D000206 1.7e-09 66.6 78 42.3
AL1G65410 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 2.2e-09 66.2 78 44.9
AL8G27500 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 2.2e-09 66.2 82 40.2
AT5G48980 Arabidopsis thaliana HOM05D000249 ORTHO05D000206 2.2e-09 66.2 76 44.7
AT5G51250 Arabidopsis thaliana HOM05D000249 ORTHO05D000206 2.2e-09 66.2 88 43.2
BcaC04g20279 Brassica carinata HOM05D000249 ORTHO05D024135 2.2e-09 66.2 81 39.5
BolC9t57428H Brassica oleracea HOM05D000249 ORTHO05D024135 2.2e-09 66.2 81 39.5
Carub.0007s0623 Capsella rubella HOM05D000249 ORTHO05D000206 2.2e-09 66.2 93 41.9
Thhalv10021905m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 2.2e-09 66.2 84 42.9
Thhalv10021944m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 2.2e-09 66.2 85 43.5
Thhalv10026752m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 2.2e-09 66.2 82 43.9
Sp1g37820 Schrenkiella parvula HOM05D000249 ORTHO05D000206 2.2e-09 66.2 84 42.9
Carub.0007s0653 Capsella rubella HOM05D000249 ORTHO05D000206 3.7e-09 65.5 89 40.4
Thhalv10027065m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 4.8e-09 65.1 84 39.3
BcaC02g11166 Brassica carinata HOM05D000249 ORTHO05D000206 6.3e-09 64.7 93 38.7
A09p27360 Brassica napus HOM05D000249 ORTHO05D000206 6.3e-09 64.7 85 37.6
C04p19780 Brassica napus HOM05D000249 ORTHO05D000206 6.3e-09 64.7 93 38.7
BolC4t23511H Brassica oleracea HOM05D000249 ORTHO05D000206 6.3e-09 64.7 93 38.7
Thhalv10028720m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 6.3e-09 64.7 88 40.9
A04p08940 Brassica napus HOM05D000249 ORTHO05D000206 8.3e-09 64.3 76 44.7
BraA04t16590Z Brassica rapa HOM05D000249 ORTHO05D000206 8.3e-09 64.3 76 44.7
BraA09t38306Z Brassica rapa HOM05D000249 ORTHO05D000206 8.3e-09 64.3 85 37.6
AT2G20380 Arabidopsis thaliana HOM05D000249 ORTHO05D000206 1.1e-08 63.9 78 42.3
Carub.0002s0370 Capsella rubella HOM05D000249 ORTHO05D000206 1.1e-08 63.9 82 39.0
Carub.0007s0165 Capsella rubella HOM05D000249 ORTHO05D000206 1.1e-08 63.9 89 37.1
CARHR286060 Cardamine hirsuta HOM05D000249 ORTHO05D000206 1.1e-08 63.9 74 40.5
Thhalv10029170m.g Eutrema salsugineum HOM05D000249 ORTHO05D013797 1.1e-08 63.9 91 38.5
AT5G49000 Arabidopsis thaliana HOM05D000249 ORTHO05D000206 1.4e-08 63.5 82 37.8
CARHR247170 Cardamine hirsuta HOM05D000249 ORTHO05D000206 1.4e-08 63.5 78 39.7
Thhalv10027031m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 1.4e-08 63.5 93 36.6
AT1G19930 Arabidopsis thaliana HOM05D000249 ORTHO05D000206 1.8e-08 63.2 83 38.6
AT2G03460 Arabidopsis thaliana HOM05D000249 ORTHO05D000206 1.8e-08 63.2 84 41.7
C07p63090 Brassica napus HOM05D000249 ORTHO05D000206 1.8e-08 63.2 85 41.2
BolC7t46720H Brassica oleracea HOM05D000249 ORTHO05D000206 1.8e-08 63.2 76 43.4
Carub.0007s0143 Capsella rubella HOM05D000249 ORTHO05D000206 1.8e-08 63.2 82 41.5
Thhalv10029197m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 1.8e-08 63.2 81 39.5
AL2G16030 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 2.4e-08 62.8 82 37.8
AL7G51870 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 2.4e-08 62.8 82 41.5
Sp7g29610 Schrenkiella parvula HOM05D000249 ORTHO05D000206 2.4e-08 62.8 66 42.4
Sp7g36290 Schrenkiella parvula HOM05D000249 ORTHO05D000206 2.4e-08 62.8 76 40.8
Carub.0007s3719 Capsella rubella HOM05D000249 ORTHO05D000206 3.1e-08 62.4 82 40.2
CARHR286070 Cardamine hirsuta HOM05D000249 ORTHO05D000206 3.1e-08 62.4 74 40.5
Thhalv10029416m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 3.1e-08 62.4 82 36.6
AT4G39290 Arabidopsis thaliana HOM05D000249 ORTHO05D000206 4.1e-08 62.0 96 33.3
AT4G39600 Arabidopsis thaliana HOM05D000249 ORTHO05D000206 4.1e-08 62.0 75 44.0
CARHR112900 Cardamine hirsuta HOM05D000249 ORTHO05D000206 4.1e-08 62.0 88 43.2
Thhalv10017704m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 4.1e-08 62.0 86 41.9
AL3G28900 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 5.4e-08 61.6 85 41.2
BcaB04g20453 Brassica carinata HOM05D000249 ORTHO05D000206 5.4e-08 61.6 82 41.5
Thhalv10022314m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 5.4e-08 61.6 102 39.2
AL5G29830 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 7.0e-08 61.2 83 43.4
AL7G11720 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 7.0e-08 61.2 80 41.2
AT5G38670 Arabidopsis thaliana HOM05D000249 ORTHO05D000206 7.0e-08 61.2 86 37.2
Thhalv10029154m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 7.0e-08 61.2 81 42.0
BcaB02g09261 Brassica carinata HOM05D000249 ORTHO05D000206 9.1e-08 60.8 83 39.8
Carub.0002s0527 Capsella rubella HOM05D000249 ORTHO05D000206 9.1e-08 60.8 82 39.0
BcaB03g13187 Brassica carinata HOM05D000249 ORTHO05D013797 1.2e-07 60.5 93 38.7
BcaB01g05525 Brassica carinata HOM05D000249 ORTHO05D000206 1.6e-07 60.1 79 41.8
C03p05170 Brassica napus HOM05D000249 ORTHO05D000206 1.6e-07 60.1 79 43.0
C03p05260 Brassica napus HOM05D000249 ORTHO05D000206 1.6e-07 60.1 79 43.0
BolC3t13040H Brassica oleracea HOM05D000249 ORTHO05D000206 1.6e-07 60.1 79 43.0
BolSC81t61259H Brassica oleracea HOM05D000249 ORTHO05D000206 1.6e-07 60.1 79 43.0
CARHR163670 Cardamine hirsuta HOM05D000249 ORTHO05D000206 2.0e-07 59.7 56 42.9
Thhalv10017832m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 2.0e-07 59.7 90 43.3
AL7G27370 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 2.7e-07 59.3 93 40.9
Carub.0007s3717 Capsella rubella HOM05D000249 ORTHO05D000206 2.7e-07 59.3 85 41.2
CARHR174960 Cardamine hirsuta HOM05D000249 ORTHO05D000206 3.5e-07 58.9 82 41.5
Thhalv10029520m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 3.5e-07 58.9 85 38.8
CARHR286140 Cardamine hirsuta HOM05D000249 ORTHO05D000206 4.5e-07 58.5 74 39.2
AL2G14770 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 5.9e-07 58.2 86 39.5
BolC3t13039H Brassica oleracea HOM05D000249 ORTHO05D000206 5.9e-07 58.2 79 44.3
Carub.0004s0608 Capsella rubella HOM05D000249 ORTHO05D000206 5.9e-07 58.2 77 42.9
AL3G14930 Arabidopsis lyrata HOM05D000249 ORTHO05D019718 7.7e-07 57.8 78 41.0
AL8G22300 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 7.7e-07 57.8 75 42.7
BcaNung00878 Brassica carinata HOM05D000249 ORTHO05D000206 7.7e-07 57.8 82 36.6
BcaNung01954 Brassica carinata HOM05D000249 ORTHO05D000206 7.7e-07 57.8 91 42.9
C03p05240 Brassica napus HOM05D000249 ORTHO05D000206 7.7e-07 57.8 79 41.8
C04p12420 Brassica napus HOM05D000249 ORTHO05D000206 7.7e-07 57.8 78 39.7
C07p63480 Brassica napus HOM05D000249 ORTHO05D000206 7.7e-07 57.8 91 42.9
C09p34690 Brassica napus HOM05D000249 ORTHO05D000206 7.7e-07 57.8 85 36.5
BolC4t22891H Brassica oleracea HOM05D000249 ORTHO05D000206 7.7e-07 57.8 78 39.7
BolC9t56314H Brassica oleracea HOM05D000249 ORTHO05D000206 7.7e-07 57.8 85 36.5
CARHR174920 Cardamine hirsuta HOM05D000249 ORTHO05D000206 1.0e-06 57.4 82 42.7
CARHR247180 Cardamine hirsuta HOM05D000249 ORTHO05D000206 1.0e-06 57.4 86 37.2
Thhalv10012107m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 1.0e-06 57.4 85 38.8
AL3G23410 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 1.3e-06 57.0 90 38.9
A03p16800 Brassica napus HOM05D000249 ORTHO05D024375 1.3e-06 57.0 83 37.3
BraA03t10968Z Brassica rapa HOM05D000249 ORTHO05D024375 1.3e-06 57.0 83 37.3
Carub.0002s0369 Capsella rubella HOM05D000249 ORTHO05D000206 1.3e-06 57.0 74 35.1
Sp4g16160 Schrenkiella parvula HOM05D000249 ORTHO05D000206 1.3e-06 57.0 104 38.5
AT4G38940 Arabidopsis thaliana HOM05D000249 ORTHO05D000206 1.7e-06 56.6 83 39.8
C04p60130 Brassica napus HOM05D000249 ORTHO05D000206 1.7e-06 56.6 87 36.8
Carub.0263s0002 Capsella rubella HOM05D000249 ORTHO05D000206 1.7e-06 56.6 63 44.4
CARHR185060 Cardamine hirsuta HOM05D000249 ORTHO05D000206 1.7e-06 56.6 93 37.6
Thhalv10017616m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 1.7e-06 56.6 84 42.9
A01p00450 Brassica napus HOM05D000249 ORTHO05D000206 2.3e-06 56.2 87 41.4
BraA01t00052Z Brassica rapa HOM05D000249 ORTHO05D000206 2.3e-06 56.2 87 41.4
BcaB01g04129 Brassica carinata HOM05D000249 ORTHO05D013797 2.9e-06 55.8 88 37.5
BcaB06g28469 Brassica carinata HOM05D000249 ORTHO05D000206 2.9e-06 55.8 87 36.8
BolC4t27516H Brassica oleracea HOM05D000249 ORTHO05D000206 2.9e-06 55.8 87 36.8
BolC7t46762H Brassica oleracea HOM05D000249 ORTHO05D000206 2.9e-06 55.8 91 41.8
Thhalv10026900m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 2.9e-06 55.8 94 37.2
Sp7g36900 Schrenkiella parvula HOM05D000249 ORTHO05D000206 2.9e-06 55.8 92 42.4
AL5G13220 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 3.8e-06 55.5 84 38.1
AL7G11950 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 3.8e-06 55.5 86 36.0
A06p48820 Brassica napus HOM05D000249 ORTHO05D000206 3.8e-06 55.5 91 41.8
Carub.0006s3192 Capsella rubella HOM05D000249 ORTHO05D000206 3.8e-06 55.5 82 39.0
Carub.0007s2240 Capsella rubella HOM05D000249 ORTHO05D000206 3.8e-06 55.5 87 36.8
Thhalv10025413m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 3.8e-06 55.5 95 44.2
BcaB06g28400 Brassica carinata HOM05D000249 ORTHO05D000206 5.0e-06 55.1 95 38.9
AL6G40440 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 6.6e-06 54.7 92 31.5
BraA06t27750Z Brassica rapa HOM05D000249 ORTHO05D000206 6.6e-06 54.7 85 41.2
Aa31LG6G15360 Aethionema arabicum HOM05D000249 ORTHO05D000206 8.6e-06 54.3 96 32.3
AL8G22290 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 8.6e-06 54.3 77 40.3
BcaB02g10351 Brassica carinata HOM05D000249 ORTHO05D013797 8.6e-06 54.3 83 38.6
Carub.0007s0145 Capsella rubella HOM05D000249 ORTHO05D000206 8.6e-06 54.3 72 40.3


User provided reference genes

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