Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g27735 Brassica carinata HOM05D007565 ORTHO05D009551 1.7e-87 325.9 157 100.0
BolC4t26571H Brassica oleracea HOM05D007565 ORTHO05D009551 4.3e-78 294.7 157 89.8
BcaC02g08856 Brassica carinata HOM05D007565 ORTHO05D009551 3.7e-77 291.6 157 89.2
C04p49800 Brassica napus HOM05D007565 ORTHO05D009551 3.7e-77 291.6 157 89.2
A04p15530 Brassica napus HOM05D007565 ORTHO05D009551 1.1e-76 290.0 157 89.2
BraA04t17189Z Brassica rapa HOM05D007565 ORTHO05D009551 1.1e-76 290.0 157 89.2
Sp7g02770 Schrenkiella parvula HOM05D007565 ORTHO05D009551 2.9e-74 282.0 157 85.4
Thhalv10027973m.g Eutrema salsugineum HOM05D007565 ORTHO05D009551 7.6e-67 257.3 157 80.9
CARHR263200 Cardamine hirsuta HOM05D007565 ORTHO05D009551 1.9e-65 252.7 157 77.7
BcaC02g08855 Brassica carinata HOM05D007565 ORTHO05D009551 1.3e-63 246.5 157 79.6
BcaC02g08857 Brassica carinata HOM05D007565 ORTHO05D009551 1.3e-63 246.5 157 79.6
AL7G51250 Arabidopsis lyrata HOM05D007565 ORTHO05D009551 1.8e-63 246.1 158 77.8
Carub.0007s3671 Capsella rubella HOM05D007565 ORTHO05D009551 2.3e-63 245.7 157 77.1
AT5G39210 Arabidopsis thaliana HOM05D007565 ORTHO05D009551 6.7e-63 244.2 157 76.4
Aa31LG9G16710 Aethionema arabicum HOM05D007565 ORTHO05D009551 1.1e-44 183.7 157 61.1
THA.LOC104822868 Tarenaya hassleriana HOM05D007565 ORTHO05D009551 8.5e-42 174.1 162 58.6
FvH4_6g46840 Fragaria vesca HOM05D007565 ORTHO05D009551 7.4e-38 161.0 158 51.9
MD09G1066900 Malus domestica HOM05D007565 ORTHO05D009551 1.3e-37 160.2 157 51.6
Prupe.3G254800 Prunus persica HOM05D007565 ORTHO05D009551 3.7e-37 158.7 164 51.8
RcHm_v2.0_Chr2g0165831 Rosa chinensis HOM05D007565 ORTHO05D009551 1.1e-36 157.1 157 51.0
FAN05G3080 Fragaria x ananassa HOM05D007565 ORTHO05D009551 7.0e-36 154.5 154 51.3
Migut.H00623 Erythranthe guttata HOM05D007565 ORTHO05D009551 1.6e-35 153.3 132 54.5
PSO478G3761 Papaver somniferum HOM05D007565 ORTHO05D009551 7.7e-35 151.0 165 53.3
CANSAT64G0913 Cannabis sativa HOM05D007565 ORTHO05D009551 1.0e-34 150.6 159 52.2
FAN02G0614 Fragaria x ananassa HOM05D007565 ORTHO05D009551 6.5e-34 147.9 91 71.4
FAN09G3824 Fragaria x ananassa HOM05D007565 ORTHO05D009551 6.5e-34 147.9 91 71.4
FAN14G1390 Fragaria x ananassa HOM05D007565 ORTHO05D009551 8.5e-34 147.5 91 71.4
Gohir.A09G009400 Gossypium hirsutum HOM05D007565 ORTHO05D009551 8.5e-34 147.5 152 50.0
Dinv33829 Davidia involucrata HOM05D007565 ORTHO05D009551 1.1e-33 147.1 162 49.4
TAR371G0975 Trochodendron aralioides HOM05D007565 ORTHO05D009551 2.5e-33 146.0 159 49.7
Cc07_g04240 Coffea canephora HOM05D007565 ORTHO05D009551 3.2e-33 145.6 99 67.7
Gohir.D09G008500 Gossypium hirsutum HOM05D007565 ORTHO05D009551 4.2e-33 145.2 152 50.0
Gorai.006G010200 Gossypium raimondii HOM05D007565 ORTHO05D009551 4.2e-33 145.2 152 50.0
PGR004G0757 Punica granatum HOM05D007565 ORTHO05D009551 9.4e-33 144.1 102 61.8
GSVIVG01032907001 Vitis vinifera HOM05D007565 ORTHO05D009551 9.4e-33 144.1 157 47.1
ECA238G4035 Erigeron canadensis HOM05D007565 ORTHO05D009551 1.2e-32 143.7 156 49.4
Nn4g23433 Nelumbo nucifera HOM05D007565 ORTHO05D009551 1.2e-32 143.7 157 47.8
CiPaw.04G055600 Carya illinoinensis HOM05D007565 ORTHO05D009551 1.6e-32 143.3 100 66.0
HanXRQChr07g0199761 Helianthus annuus HOM05D007565 ORTHO05D009551 1.6e-32 143.3 169 46.2
TWI60G0367 Tripterygium wilfordii HOM05D007565 ORTHO05D009551 2.1e-32 142.9 160 46.2
Cfa007669 Carpinus fangiana HOM05D007565 ORTHO05D009551 4.7e-32 141.7 100 67.0
DCAR_025432 Daucus carota HOM05D007565 ORTHO05D009551 6.1e-32 141.4 100 65.0
arahy.Tifrunner.gnm1.ann1.X5N52Z Arachis hypogaea HOM05D007565 ORTHO05D009551 1.0e-31 140.6 91 67.0
arahy.Tifrunner.gnm1.ann1.GE184H Arachis hypogaea HOM05D007565 ORTHO05D009551 1.4e-31 140.2 91 65.9
Manes.01G096100 Manihot esculenta HOM05D007565 ORTHO05D009551 1.4e-31 140.2 98 66.3
Actinidia17585 Actinidia chinensis HOM05D007565 ORTHO05D009551 3.0e-31 139.0 101 62.4
Haze_14429 Corylus avellana HOM05D007565 ORTHO05D009551 3.0e-31 139.0 100 66.0
Aqoxy3G00508 Aquilegia oxysepala HOM05D007565 ORTHO05D009551 5.2e-31 138.3 116 57.8
MBI16_g10827_MAGBIO Magnolia biondii HOM05D007565 ORTHO05D009551 5.2e-31 138.3 100 65.0
ATR0177G044 Amborella trichopoda HOM05D007565 ORTHO05D009551 6.7e-31 137.9 99 64.6
MSTRG.2997 Avicennia marina HOM05D007565 ORTHO05D009551 6.7e-31 137.9 99 63.6
Eucgr.I02035 Eucalyptus grandis HOM05D007565 ORTHO05D009551 6.7e-31 137.9 101 64.4
ClCG07G016310 Citrullus lanatus HOM05D007565 ORTHO05D009551 2.0e-30 136.3 106 61.3
Lalb_Chr02g0158911 Lupinus albus HOM05D007565 ORTHO05D009551 2.6e-30 136.0 97 64.9
AUR62018189 Chenopodium quinoa HOM05D007565 ORTHO05D009551 3.3e-30 135.6 87 73.6
Cpa.g.sc14.177 Carica papaya HOM05D007565 ORTHO05D009551 4.4e-30 135.2 100 70.0
Sabra04G0069500 Salix brachista HOM05D007565 ORTHO05D009551 4.4e-30 135.2 162 46.9
AUR62038674 Chenopodium quinoa HOM05D007565 ORTHO05D009551 5.7e-30 134.8 118 56.8
Sopen02g016110 Solanum pennellii HOM05D007565 ORTHO05D009551 5.7e-30 134.8 134 50.0
Solyc02g066920.3 Solanum lycopersicum HOM05D007565 ORTHO05D009551 7.5e-30 134.4 134 50.0
Lj2g0002665 Lotus japonicus HOM05D007565 ORTHO05D009551 1.7e-29 133.3 97 64.9
Potri.004G120300 Populus trichocarpa HOM05D007565 ORTHO05D009551 1.7e-29 133.3 95 65.3
CAN.G398.21 Capsicum annuum HOM05D007565 ORTHO05D009551 2.2e-29 132.9 102 59.8
SalBow1G1387 Salvia bowleyana HOM05D007565 ORTHO05D009551 2.2e-29 132.9 87 67.8
SalBow1G4541 Salvia bowleyana HOM05D007565 ORTHO05D009551 2.2e-29 132.9 87 67.8
QL02p067580 Quercus lobata HOM05D007565 ORTHO05D009551 2.8e-29 132.5 90 70.0
unitig_736.g22275 Utricularia gibba HOM05D007565 ORTHO05D009551 4.8e-29 131.7 92 68.5
Lsat_1_v5_gn_2_90121 Lactuca sativa HOM05D007565 ORTHO05D009551 6.3e-29 131.3 87 69.0
PGSC0003DMG400025155 Solanum tuberosum HOM05D007565 ORTHO05D009551 6.3e-29 131.3 94 62.8
TPR.G10009 Trifolium pratense HOM05D007565 ORTHO05D009551 6.3e-29 131.3 91 67.0
EL10Ac2g02475 Beta vulgaris HOM05D007565 ORTHO05D009551 1.1e-28 130.6 87 70.1
CsaV3_4G009160 Cucumis sativus L. HOM05D007565 ORTHO05D009551 1.1e-28 130.6 101 59.4
Peaxi162Scf00991g00215 Petunia axillaris HOM05D007565 ORTHO05D009551 1.1e-28 130.6 94 62.8
Sed0016543 Sechium edule HOM05D007565 ORTHO05D009551 1.1e-28 130.6 100 65.0
Nitab4.5_0000212g0260 Nicotiana tabacum HOM05D000753 ORTHO05D003622 1.4e-28 130.2 143 44.8
Nitab4.5_0002957g0030 Nicotiana tabacum HOM05D000753 ORTHO05D003622 2.4e-28 129.4 159 46.5
Atru.chr8.429 Acer truncatum HOM05D007565 ORTHO05D009551 3.1e-28 129.0 94 64.9
CSS0012139 Camellia sinensis var. sinensis HOM05D007565 ORTHO05D009551 3.1e-28 129.0 98 57.1
Glyma.19G030200 Glycine max HOM05D007565 ORTHO05D009551 7.0e-28 127.9 87 67.8
Lju41C3T7 Lonicera japonica HOM05D007565 ORTHO05D009551 9.1e-28 127.5 88 65.9
Psat1g068880 Pisum sativum HOM05D007565 ORTHO05D009551 9.1e-28 127.5 91 64.8
Ciclev10012981m.g Citrus clementina HOM05D007565 ORTHO05D009551 1.2e-27 127.1 107 58.9
EL10Ac2g03143 Beta vulgaris HOM05D007565 ORTHO05D009551 1.6e-27 126.7 80 72.5
CDE10G0935 Ceratophyllum demersum HOM05D007565 ORTHO05D009551 1.6e-27 126.7 102 56.9
VMungo0464G0770 Vigna mungo HOM05D007565 ORTHO05D009551 2.0e-27 126.3 100 63.0
MELO3C024877.2 Cucumis melo HOM05D007565 ORTHO05D009551 3.5e-27 125.6 97 60.8
Phvul.004G037200 Phaseolus vulgaris HOM05D007565 ORTHO05D009551 3.5e-27 125.6 89 67.4
Os01g0763700 Oryza sativa ssp. japonica HOM05D007565 ORTHO05D009551 1.7e-26 123.2 84 65.5
Rhsim08G0074900 Rhododendron simsii HOM05D007565 ORTHO05D009551 2.9e-26 122.5 87 63.2
COL.COLO4_04935 Corchorus olitorius HOM05D007565 ORTHO05D009551 6.5e-26 121.3 75 72.0
vmacro18148 Vaccinium macrocarpon HOM05D007565 ORTHO05D009551 7.2e-25 117.9 87 59.8
Mapoly0001s0042 Marchantia polymorpha HOM05D007565 ORTHO05D009551 7.5e-22 107.8 96 51.0
Pp3c15_1410 Physcomitrium patens HOM05D007565 ORTHO05D009551 1.7e-21 106.7 86 54.7
C04p49790 Brassica napus HOM05D007565 ORTHO05D009551 4.8e-21 105.1 62 77.4
SMO133G0016 Selaginella moellendorffii HOM05D007565 ORTHO05D009551 9.1e-20 100.9 82 56.1
AagrBONN_evm.TU.Sc2ySwM_362.2072 Anthoceros agrestis HOM05D007565 ORTHO05D009551 1.6e-19 100.1 102 49.0
SEGI_38587 Sequoiadendron giganteum HOM05D007565 ORTHO05D009551 1.6e-19 100.1 102 51.0
Medtr6g015250 Medicago truncatula HOM05D007565 ORTHO05D009551 8.6e-18 94.4 80 55.0
Medtr6g015275 Medicago truncatula HOM05D007565 ORTHO05D009551 1.5e-17 93.6 69 62.3
CDE10G1057 Ceratophyllum demersum HOM05D000058 ORTHO05D000077 4.2e-17 92.0 68 61.8
MBI19_g17444_MAGBIO Magnolia biondii HOM05D000545 ORTHO05D000539 3.5e-11 72.4 45 68.9
TPR.G36332 Trifolium pratense HOM05D007565 ORTHO05D009551 6.6e-10 68.2 49 63.3


User provided reference genes

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