Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g27672 Brassica carinata HOM05D002129 ORTHO05D002188 3.2e-184 650.6 1644 100.0
A04p14960 Brassica napus HOM05D002129 ORTHO05D002188 4.0e-118 431.0 1666 78.3
C04p49150 Brassica napus HOM05D002129 ORTHO05D002188 5.6e-112 410.6 306 90.5
BcaC02g08917 Brassica carinata HOM05D002129 ORTHO05D002188 1.8e-110 405.6 306 90.2
Sp7g00300 Schrenkiella parvula HOM05D002129 ORTHO05D002188 1.4e-107 396.0 309 90.3
BraA04t17139Z Brassica rapa HOM05D002129 ORTHO05D002188 3.2e-107 394.8 1668 65.3
BolC4t26499H Brassica oleracea HOM05D002129 ORTHO05D002188 3.9e-97 361.3 240 89.6
Carub.0007s3359 Capsella rubella HOM05D002129 ORTHO05D002188 1.8e-94 352.4 307 74.9
AT5G41790 Arabidopsis thaliana HOM05D002129 ORTHO05D002188 5.1e-89 334.3 311 71.4
BolC6t37203H Brassica oleracea HOM05D002129 ORTHO05D002188 9.7e-88 330.1 568 69.9
AL7G47470 Arabidopsis lyrata HOM05D002129 ORTHO05D002188 1.1e-86 326.6 311 72.3
C06p20190 Brassica napus HOM05D001971 ORTHO05D002188 2.4e-86 325.5 568 69.7
BcaC08g44556 Brassica carinata HOM05D002129 ORTHO05D002188 5.9e-85 320.9 568 69.4
A07p20930 Brassica napus HOM05D002129 ORTHO05D002188 2.2e-79 302.4 568 68.1
Thhalv10027620m.g Eutrema salsugineum HOM05D002129 ORTHO05D002188 1.7e-76 292.7 355 64.8
Carub.0007s3367 Capsella rubella HOM05D002129 ORTHO05D021914 1.6e-74 286.2 330 61.8
C08p22900 Brassica napus HOM05D002129 ORTHO05D016708 9.4e-67 260.4 235 86.4
BolC8t49926H Brassica oleracea HOM05D002129 ORTHO05D016708 9.4e-67 260.4 235 86.4
BcaC07g39281 Brassica carinata HOM05D002129 ORTHO05D016708 5.7e-64 251.1 235 70.2
Aa31LG9G340 Aethionema arabicum HOM05D002129 ORTHO05D002188 1.6e-58 233.0 255 63.9
CARHR212780 Cardamine hirsuta HOM05D002129 ORTHO05D002188 8.9e-57 227.3 188 80.3
THA.LOC104809341 Tarenaya hassleriana HOM05D002129 ORTHO05D002188 5.9e-53 214.5 428 43.9
BcaB07g31455 Brassica carinata HOM05D002129 ORTHO05D002188 1.5e-51 209.9 230 62.2
AL2G10610 Arabidopsis lyrata HOM05D002129 ORTHO05D002188 2.5e-51 209.1 233 61.8
Thhalv10023387m.g Eutrema salsugineum HOM05D002129 ORTHO05D002188 6.1e-50 204.5 224 62.9
Sp2g00430 Schrenkiella parvula HOM05D002129 ORTHO05D002188 3.7e-47 195.3 208 63.0
C09p17910 Brassica napus HOM05D002129 ORTHO05D002188 1.9e-46 193.0 230 59.1
BolC9t54688H Brassica oleracea HOM05D002129 ORTHO05D002188 1.9e-46 193.0 230 59.1
A09p14790 Brassica napus HOM05D002129 ORTHO05D002188 3.2e-46 192.2 230 59.1
BcaC04g22559 Brassica carinata HOM05D002129 ORTHO05D002188 7.8e-45 187.6 230 58.3
Carub.0002s0048 Capsella rubella HOM05D002129 ORTHO05D002188 3.3e-43 182.2 185 66.5
Duzib205G0555 Durio zibethinus HOM05D002129 ORTHO05D002188 4.4e-40 171.8 251 45.4
Gohir.A02G102200 Gossypium hirsutum HOM05D002129 ORTHO05D002188 2.2e-39 169.5 306 38.9
C07p01920 Brassica napus HOM05D002129 ORTHO05D002188 8.3e-39 167.5 278 54.3
arahy.Tifrunner.gnm1.ann1.DN0YA4 Arachis hypogaea HOM05D002129 ORTHO05D002188 1.1e-38 167.2 330 37.6
AT1G64330 Arabidopsis thaliana HOM05D002129 ORTHO05D002188 4.1e-38 165.2 182 66.5
CARHR046630 Cardamine hirsuta HOM05D002129 ORTHO05D002188 5.4e-38 164.9 223 50.7
COL.COLO4_21718 Corchorus olitorius HOM05D002129 ORTHO05D002188 2.1e-37 162.9 232 46.6
arahy.Tifrunner.gnm1.ann1.Q3GPI2 Arachis hypogaea HOM05D002129 ORTHO05D002188 4.6e-37 161.8 251 43.4
Gohir.D03G081900 Gossypium hirsutum HOM05D002129 ORTHO05D002188 4.6e-37 161.8 217 47.5
Gorai.003G081700 Gossypium raimondii HOM05D002129 ORTHO05D002188 4.6e-37 161.8 225 46.2
Manes.01G045900 Manihot esculenta HOM05D002129 ORTHO05D002188 6.0e-37 161.4 247 46.6
Eucgr.E00844 Eucalyptus grandis HOM05D002129 ORTHO05D002188 7.8e-37 161.0 310 37.4
Ciclev10018618m.g Citrus clementina HOM05D002129 ORTHO05D002188 2.3e-36 159.5 255 45.9
Thecc.03G293200 Theobroma cacao HOM05D002129 ORTHO05D002188 1.1e-35 157.1 228 46.5
Potri.001G094200 Populus trichocarpa HOM05D002129 ORTHO05D002188 9.5e-35 154.1 237 45.1
Duzib068G1418 Durio zibethinus HOM05D002129 ORTHO05D002188 3.6e-34 152.1 252 41.3
Actinidia27335 Actinidia chinensis HOM05D002129 ORTHO05D002188 1.1e-33 150.6 252 45.6
Manes.10G064266 Manihot esculenta HOM05D002129 ORTHO05D002188 1.4e-33 150.2 253 46.6
Gohir.D09G185400 Gossypium hirsutum HOM05D002129 ORTHO05D002188 3.1e-33 149.1 222 45.0
Gorai.006G207900 Gossypium raimondii HOM05D002129 ORTHO05D002188 5.2e-33 148.3 217 45.6
Gohir.A09G190800 Gossypium hirsutum HOM05D002129 ORTHO05D002188 1.5e-32 146.7 219 45.7
Ca_17495_v3 Cicer arietinum L. HOM05D002129 ORTHO05D002188 3.7e-31 142.1 250 41.6
BcaC06g36642 Brassica carinata HOM05D002129 ORTHO05D002188 6.4e-31 141.4 137 65.7
BolC7t40600H Brassica oleracea HOM05D002129 ORTHO05D002188 6.4e-31 141.4 137 65.7
TWI60G1278 Tripterygium wilfordii HOM05D002129 ORTHO05D002188 1.1e-30 140.6 329 37.4
Solyc08g082010.3 Solanum lycopersicum HOM05D002129 ORTHO05D002188 3.2e-30 139.0 231 45.9
A07p20920 Brassica napus HOM05D002129 ORTHO05D002188 5.4e-30 138.3 166 67.5
Sabra03G0098900 Salix brachista HOM05D002129 ORTHO05D002188 2.1e-29 136.3 243 36.2
RcHm_v2.0_Chr7g0195431 Rosa chinensis HOM05D002129 ORTHO05D002188 3.0e-28 132.5 203 45.8
FAN08G2643 Fragaria x ananassa HOM05D002129 ORTHO05D002188 3.9e-28 132.1 207 45.9
Potri.003G137400 Populus trichocarpa HOM05D002129 ORTHO05D002188 5.1e-28 131.7 223 41.7
FAN18G3989 Fragaria x ananassa HOM05D002129 ORTHO05D002188 6.6e-28 131.3 204 46.6
MD14G1121500 Malus domestica HOM05D002129 ORTHO05D002188 6.6e-28 131.3 224 43.8
FAN13G0971 Fragaria x ananassa HOM05D002129 ORTHO05D002188 1.1e-27 130.6 207 45.4
Cc08_g15780 Coffea canephora HOM05D002129 ORTHO05D002188 1.9e-27 129.8 213 42.7
FvH4_5g04072 Fragaria vesca HOM05D002129 ORTHO05D002188 2.5e-27 129.4 204 46.1
Sopen08g030310 Solanum pennellii HOM05D002129 ORTHO05D002188 2.5e-27 129.4 222 45.5
Nitab4.5_0000223g0210 Nicotiana tabacum HOM05D002129 ORTHO05D002188 5.6e-27 128.3 322 42.5
TAR374G0929 Trochodendron aralioides HOM05D002129 ORTHO05D002188 7.3e-27 127.9 253 37.2
Phvul.002G296300 Phaseolus vulgaris HOM05D002129 ORTHO05D002188 4.7e-26 125.2 227 42.7
Glyma.05G215100 Glycine max HOM05D002129 ORTHO05D002188 1.8e-25 123.2 331 34.4
Manes.02G012600 Manihot esculenta HOM05D002129 ORTHO05D002188 2.4e-25 122.9 194 45.4
CSS0045654 Camellia sinensis var. sinensis HOM05D002129 ORTHO05D002188 4.0e-25 122.1 175 41.7
Cpa.g.sc79.65 Carica papaya HOM05D002129 ORTHO05D002188 5.2e-25 121.7 217 44.7
Cfa012842 Carpinus fangiana HOM05D002129 ORTHO05D002188 5.2e-25 121.7 188 41.5
Dinv37550 Davidia involucrata HOM05D002129 ORTHO05D002188 5.2e-25 121.7 193 45.6
Medtr8g099275 Medicago truncatula HOM05D002129 ORTHO05D002188 5.2e-25 121.7 253 36.8
Duzib084G0477 Durio zibethinus HOM05D002129 ORTHO05D002188 6.8e-25 121.3 200 41.0
Nitab4.5_0004161g0030 Nicotiana tabacum HOM05D002129 ORTHO05D002188 8.9e-25 120.9 209 44.5
Sabra01G0070100 Salix brachista HOM05D002129 ORTHO05D002188 8.9e-25 120.9 204 43.6
vmacro13912 Vaccinium macrocarpon HOM05D002129 ORTHO05D002188 8.9e-25 120.9 183 40.4
Haze_08667 Corylus avellana HOM05D002129 ORTHO05D002188 1.5e-24 120.2 183 41.5
BcaC02g11041 Brassica carinata HOM05D002129 ORTHO05D016708 3.4e-24 119.0 358 33.8
Lj4g0008940 Lotus japonicus HOM05D002129 ORTHO05D002188 3.4e-24 119.0 207 44.0
SGA_v2.0_scaffold111G31429 Striga asiatica HOM05D002129 ORTHO05D002188 1.7e-23 116.7 227 41.9
Aa31LG2G1320 Aethionema arabicum HOM05D005266 ORTHO05D006416 2.2e-23 116.3 183 49.7
Oeu009945.1 Olea europaea HOM05D002129 ORTHO05D002188 3.8e-23 115.5 311 35.4
CAN.G532.94 Capsicum annuum HOM05D002129 ORTHO05D002188 4.9e-23 115.2 184 48.4
Glyma.08G021400 Glycine max HOM05D002129 ORTHO05D002188 4.9e-23 115.2 214 43.5
BcaB02g10228 Brassica carinata HOM05D002129 ORTHO05D016708 6.4e-23 114.8 293 38.6
QL02p031434 Quercus lobata HOM05D002129 ORTHO05D002188 6.4e-23 114.8 183 42.1
Oeu042387.1 Olea europaea HOM05D002129 ORTHO05D002188 8.4e-23 114.4 190 46.8
GSVIVG01019499001 Vitis vinifera HOM05D002129 ORTHO05D002188 1.1e-22 114.0 248 34.3
CiPaw.12G085000 Carya illinoinensis HOM05D002129 ORTHO05D002188 1.9e-22 113.2 179 42.5
Lsat_1_v5_gn_6_12040 Lactuca sativa HOM05D002129 ORTHO05D002188 3.2e-22 112.5 221 41.6
PGSC0003DMG400012303 Solanum tuberosum HOM05D002129 ORTHO05D002188 3.2e-22 112.5 178 46.6
Rhsim07G0084000 Rhododendron simsii HOM05D002129 ORTHO05D002188 4.2e-22 112.1 183 38.8
SGA_v2.0_scaffold144G35850 Striga asiatica HOM05D002129 ORTHO05D002188 4.6e-21 108.6 227 43.6
TPR.G3412 Trifolium pratense HOM05D002129 ORTHO05D002188 4.6e-21 108.6 215 39.1
Lalb_Chr16g0390551 Lupinus albus HOM05D002129 ORTHO05D002188 6.0e-21 108.2 237 34.2
Peaxi162Scf00074g01134 Petunia axillaris HOM05D002129 ORTHO05D002188 7.8e-21 107.8 228 39.9
ClCG07G014890 Citrullus lanatus HOM05D002129 ORTHO05D002188 1.3e-20 107.1 235 43.8
FAN04G1700 Fragaria x ananassa HOM05D002129 ORTHO05D002188 2.3e-20 106.3 271 34.7
FAN04G3154 Fragaria x ananassa HOM05D002129 ORTHO05D002188 2.3e-20 106.3 271 34.7
CANSAT21G2383 Cannabis sativa HOM05D002129 ORTHO05D002188 3.9e-20 105.5 185 43.2
AUR62019808 Chenopodium quinoa HOM05D002129 ORTHO05D002188 5.1e-20 105.1 184 38.0
SalBow8G2059 Salvia bowleyana HOM05D002129 ORTHO05D002188 1.1e-19 104.0 210 45.2
VMungo0251G1428 Vigna mungo HOM05D002129 ORTHO05D002188 1.1e-19 104.0 252 32.9
MD06G1102300 Malus domestica HOM05D002129 ORTHO05D002188 1.5e-19 103.6 206 41.7
AUR62010809 Chenopodium quinoa HOM05D002129 ORTHO05D002188 3.3e-19 102.4 183 36.6
Atru.chr9.2042 Acer truncatum HOM05D002129 ORTHO05D002188 5.6e-19 101.7 188 41.5
Lalb_Chr05g0224241 Lupinus albus HOM05D002129 ORTHO05D002188 7.3e-19 101.3 184 35.9
CsaV3_4G006420 Cucumis sativus L. HOM05D002129 ORTHO05D002188 9.6e-19 100.9 229 40.2
MSTRG.25657 Avicennia marina HOM05D002129 ORTHO05D002188 1.2e-18 100.5 267 37.5
CiPaw.11G123900 Carya illinoinensis HOM05D002129 ORTHO05D002188 2.1e-18 99.8 180 35.6
ECA233G6022 Erigeron canadensis HOM05D002129 ORTHO05D002188 2.1e-18 99.8 228 36.8
ECA240G2507 Erigeron canadensis HOM05D002129 ORTHO05D002188 3.6e-18 99.0 221 43.4
MELO3C016308.2 Cucumis melo HOM05D002129 ORTHO05D002188 4.7e-18 98.6 229 39.7
Sc07g0009960 Simmondsia chinensis HOM05D002129 ORTHO05D002188 8.1e-18 97.8 309 37.9
Migut.E01236 Erythranthe guttata HOM05D002129 ORTHO05D002188 1.1e-17 97.4 181 42.5
Sed0022097 Sechium edule HOM05D002129 ORTHO05D002188 1.8e-17 96.7 260 37.3
Aqoxy5G04152 Aquilegia oxysepala HOM05D002129 ORTHO05D002188 4.0e-17 95.5 332 32.8
FAN18G4528 Fragaria x ananassa HOM05D002129 ORTHO05D002188 5.3e-17 95.1 172 44.2
DCAR_005027 Daucus carota HOM05D002129 ORTHO05D002188 1.5e-16 93.6 245 33.1
Dinv38857 Davidia involucrata HOM05D002129 ORTHO05D002188 9.9e-16 90.9 242 31.0
HanXRQChr03g0085141 Helianthus annuus HOM05D002129 ORTHO05D002188 9.9e-16 90.9 208 40.9
HanXRQChr02g0048241 Helianthus annuus HOM05D002129 ORTHO05D002188 2.2e-15 89.7 186 40.9
PGR042G1587 Punica granatum HOM05D002129 ORTHO05D002188 2.2e-15 89.7 253 34.8
Psat7g027680 Pisum sativum HOM05D002129 ORTHO05D002188 2.9e-15 89.4 214 40.7
Lsat_1_v5_gn_6_85821 Lactuca sativa HOM05D002129 ORTHO05D002188 4.9e-15 88.6 214 41.6
Lalb_Chr09g0332631 Lupinus albus HOM05D002129 ORTHO05D002188 1.1e-14 87.4 216 36.1
arahy.Tifrunner.gnm1.ann1.F3VNHJ Arachis hypogaea HOM05D002129 ORTHO05D002188 4.2e-14 85.5 96 45.8
CSS0027740 Camellia sinensis var. sinensis HOM05D002129 ORTHO05D002188 2.1e-13 83.2 221 31.2
arahy.Tifrunner.gnm1.ann1.P7UIV5 Arachis hypogaea HOM05D002129 ORTHO05D002188 3.5e-13 82.4 96 43.8
Prupe.5G115200 Prunus persica HOM05D002129 ORTHO05D002188 6.0e-13 81.6 221 34.4
CSS0018198 Camellia sinensis var. sinensis HOM05D002129 ORTHO05D002188 7.8e-13 81.3 221 29.9
Prupe.5G115300 Prunus persica HOM05D002129 ORTHO05D002188 7.8e-13 81.3 361 31.9
A07p07550 Brassica napus HOM05D002129 ORTHO05D002188 5.1e-12 78.6 46 91.3
Actinidia01396 Actinidia chinensis HOM05D002129 ORTHO05D002188 1.9e-11 76.6 245 29.8
EL10Ac5g12884 Beta vulgaris HOM05D002129 ORTHO05D002188 3.3e-11 75.9 187 43.3
CSS0047098 Camellia sinensis var. sinensis HOM05D002129 ORTHO05D002188 9.6e-11 74.3 224 29.0
CSS0015477 Camellia sinensis var. sinensis HOM05D002129 ORTHO05D002188 1.3e-10 73.9 224 29.0
PSO135G0315 Papaver somniferum HOM05D031015 ORTHO05D002188 4.8e-10 72.0 239 34.7
SalBow1G3214 Salvia bowleyana HOM05D002129 ORTHO05D002188 1.8e-09 70.1 246 32.1
Dinv37551 Davidia involucrata HOM05D002129 ORTHO05D002188 5.3e-09 68.6 194 28.4
Migut.N02095 Erythranthe guttata HOM05D002129 ORTHO05D002188 5.3e-09 68.6 242 30.2
Rhsim02G0241100 Rhododendron simsii HOM05D002129 ORTHO05D002188 5.3e-09 68.6 176 30.7
MD06G1102200 Malus domestica HOM05D002129 ORTHO05D002188 9.0e-09 67.8 233 32.6
MD14G1121400 Malus domestica HOM05D002129 ORTHO05D002188 1.2e-08 67.4 233 31.8
Oeu061086.1 Olea europaea HOM05D002129 ORTHO05D002188 1.5e-08 67.0 251 28.7
PSO170G1432 Papaver somniferum HOM05D031015 ORTHO05D002188 4.5e-08 65.5 185 38.4
CANSAT21G0822 Cannabis sativa HOM05D002129 ORTHO05D002188 2.2e-07 63.2 242 28.9
Migut.E01235 Erythranthe guttata HOM05D002129 ORTHO05D002188 2.9e-07 62.8 236 34.3
Potri.003G137300 Populus trichocarpa HOM05D002129 ORTHO05D002188 6.4e-07 61.6 249 26.5
PSO384G3006 Papaver somniferum HOM05D031015 ORTHO05D002188 1.4e-06 60.5 176 37.5
Sc07g0009950 Simmondsia chinensis HOM05D002129 ORTHO05D002188 1.4e-06 60.5 233 26.2
BraA03t09871Z Brassica rapa HOM05D002129 ORTHO05D016708 3.2e-06 59.3 34 94.1
Migut.A00678 Erythranthe guttata HOM05D002129 ORTHO05D002188 4.2e-06 58.9 247 35.6
Hund11405 Selenicereus undatus HOM05D002129 ORTHO05D002188 7.1e-06 58.2 136 41.2
Thecc.03G293100 Theobroma cacao HOM05D002129 ORTHO05D002188 7.1e-06 58.2 228 27.2


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