Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g27640 Brassica carinata HOM05D001461 ORTHO05D002801 7.2e-37 156.8 81 100.0
BcaB06g27641 Brassica carinata HOM05D001461 ORTHO05D002801 7.2e-37 156.8 81 100.0
BcaC02g08944 Brassica carinata HOM05D001461 ORTHO05D002801 7.2e-37 156.8 81 100.0
C04p48610 Brassica napus HOM05D001461 ORTHO05D002801 7.2e-37 156.8 81 100.0
BolC4t26456H Brassica oleracea HOM05D001461 ORTHO05D002801 7.2e-37 156.8 81 100.0
A04p14720 Brassica napus HOM05D001461 ORTHO05D002801 1.8e-35 152.1 81 97.5
BraA04t17112Z Brassica rapa HOM05D001461 ORTHO05D002801 1.8e-35 152.1 81 97.5
BcaB06g27636 Brassica carinata HOM05D001461 ORTHO05D002801 3.3e-29 131.3 81 87.7
Sp7g00420 Schrenkiella parvula HOM05D001461 ORTHO05D002801 3.7e-25 117.9 87 81.6
Thhalv10027655m.g Eutrema salsugineum HOM05D001461 ORTHO05D002801 8.6e-22 106.7 85 75.3
Carub.0007s3384 Capsella rubella HOM05D001461 ORTHO05D002801 1.5e-21 105.9 84 76.2
AL7G47760 Arabidopsis lyrata HOM05D001461 ORTHO05D002801 4.3e-21 104.4 84 76.2
AT5G41620 Arabidopsis thaliana HOM05D001461 ORTHO05D002801 9.5e-21 103.2 84 75.0
CARHR212870 Cardamine hirsuta HOM05D001461 ORTHO05D002801 1.6e-15 85.9 87 67.8
THA.LOC104817743 Tarenaya hassleriana HOM05D001461 ORTHO05D002801 4.3e-13 77.8 88 62.5
THA.LOC104809347 Tarenaya hassleriana HOM05D001461 ORTHO05D002801 3.6e-12 74.7 88 60.2
AL2G10840 Arabidopsis lyrata HOM05D001461 ORTHO05D002801 4.0e-11 71.2 88 56.8
AT1G64180 Arabidopsis thaliana HOM05D001461 ORTHO05D002801 8.9e-11 70.1 86 55.8
BcaC04g22647 Brassica carinata HOM05D001461 ORTHO05D002801 1.5e-10 69.3 88 53.4
A09p14160 Brassica napus HOM05D001461 ORTHO05D002801 1.5e-10 69.3 88 53.4
BolC9t54605H Brassica oleracea HOM05D001461 ORTHO05D002801 1.5e-10 69.3 88 53.4
BraA09t37064Z Brassica rapa HOM05D001461 ORTHO05D002801 1.5e-10 69.3 88 53.4
Carub.0002s0063 Capsella rubella HOM05D001461 ORTHO05D002801 2.0e-10 68.9 88 54.5
Aa31LG2G1220 Aethionema arabicum HOM05D001461 ORTHO05D002801 1.3e-09 66.2 84 59.5
BcaB07g31522 Brassica carinata HOM05D001461 ORTHO05D002801 2.2e-09 65.5 90 53.3
C09p17070 Brassica napus HOM05D001461 ORTHO05D002801 2.2e-09 65.5 88 52.3
CARHR046760 Cardamine hirsuta HOM05D001461 ORTHO05D002801 4.9e-09 64.3 86 52.3
Sp2g00550 Schrenkiella parvula HOM05D001461 ORTHO05D002801 1.1e-08 63.2 88 47.7
Thhalv10023367m.g Eutrema salsugineum HOM05D001461 ORTHO05D002801 1.2e-07 59.7 88 50.0
Gohir.D08G133400 Gossypium hirsutum HOM05D001461 ORTHO05D002801 3.0e-06 55.1 92 39.1


User provided reference genes

Program Settings